RNA–Protein interactions for RNA: ENST00000262887.9

XRCC1-201, Transcript of X-ray repair cross complementing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XRCC1, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-201ENST00000262887 IGKV3-15P01624 115 aa12.12□□□□□ -0.47
XRCC1-201ENST00000262887 IGKV1-16P04430 117 aa12.12□□□□□ -0.47
XRCC1-201ENST00000262887 ZNF137PP52743 207 aa12.12□□□□□ -0.47
XRCC1-201ENST00000262887 AP1S3Q96PC3 154 aa12.12□□□□□ -0.47
XRCC1-201ENST00000262887 NDFIP1Q9BT67 221 aa12.12□□□□□ -0.47
XRCC1-201ENST00000262887 URB1O60287 2271 aaKnown RBP12.12□□□□□ -0.47
XRCC1-201ENST00000262887 TRGV5A0A0B4J1U4 118 aa12.11□□□□□ -0.47
XRCC1-201ENST00000262887 ZNF138P52744 262 aa12.11□□□□□ -0.47
XRCC1-201ENST00000262887 LINC01545Q5VT33 79 aa12.11□□□□□ -0.47
XRCC1-201ENST00000262887 OR1L4Q8NGR5 311 aa12.11□□□□□ -0.47
XRCC1-201ENST00000262887 GTSF1Q8WW33 167 aa12.11□□□□□ -0.47
XRCC1-201ENST00000262887 SRRM4A7MD48 611 aaKnown RBP12.11□□□□□ -0.47
XRCC1-201ENST00000262887 SNAI2O43623 268 aa12.11□□□□□ -0.47
XRCC1-201ENST00000262887 SLC25A5P05141 298 aaKnown RBP12.11□□□□□ -0.47
XRCC1-201ENST00000262887 SSBP2P81877 361 aaPredicted RBP12.11□□□□□ -0.47
XRCC1-201ENST00000262887 FOXE3Q13461 319 aa12.11□□□□□ -0.47
XRCC1-201ENST00000262887 GCSAMQ8N6F7 178 aa12.11□□□□□ -0.47
XRCC1-201ENST00000262887 FXYD5Q96DB9 178 aa12.11□□□□□ -0.47
XRCC1-201ENST00000262887 GPR82Q96P67 336 aa12.11□□□□□ -0.47
XRCC1-201ENST00000262887 PLSCR4Q9NRQ2 329 aa12.11□□□□□ -0.47
XRCC1-201ENST00000262887 EPDR1Q9UM22 224 aa12.11□□□□□ -0.47
XRCC1-201ENST00000262887 TIMM8BQ9Y5J9 83 aaPredicted RBP12.11□□□□□ -0.47
XRCC1-201ENST00000262887 CHEK1O14757 476 aa12.1□□□□□ -0.47
XRCC1-201ENST00000262887 MZT1Q08AG7 82 aa12.1□□□□□ -0.47
XRCC1-201ENST00000262887 CACNG8Q8WXS5 425 aa12.1□□□□□ -0.47
XRCC1-201ENST00000262887 DLL1O00548 723 aa12.1□□□□□ -0.47
XRCC1-201ENST00000262887 P01737 135 aa12.1□□□□□ -0.47
XRCC1-201ENST00000262887 CECR9P0C854 216 aa12.1□□□□□ -0.47
XRCC1-201ENST00000262887 CT83Q5H943 113 aa12.1□□□□□ -0.47
XRCC1-201ENST00000262887 LINC00322Q6ZN03 302 aaPredicted RBP12.1□□□□□ -0.47
XRCC1-201ENST00000262887 Q6ZT83 130 aa12.1□□□□□ -0.47
XRCC1-201ENST00000262887 SIGMAR1Q99720 223 aa12.1□□□□□ -0.47
XRCC1-201ENST00000262887 TMUB1Q9BVT8 246 aa12.1□□□□□ -0.47
XRCC1-201ENST00000262887 PRSS22Q9GZN4 317 aa12.1□□□□□ -0.47
XRCC1-201ENST00000262887 RAB9BQ9NP90 201 aa12.1□□□□□ -0.47
XRCC1-201ENST00000262887 CNOT1A5YKK6 2376 aaKnown RBP12.1□□□□□ -0.47
XRCC1-201ENST00000262887 TNCP24821 2201 aa12.1□□□□□ -0.47
XRCC1-201ENST00000262887 KBTBD11-OT1A0A1B0GTJ5 212 aa12.1□□□□□ -0.47
XRCC1-201ENST00000262887 PLAUP00749 431 aa12.1□□□□□ -0.47
XRCC1-201ENST00000262887 SAA1P0DJI8 122 aaPredicted RBP12.1□□□□□ -0.47
XRCC1-201ENST00000262887 SMIM17P0DL12 118 aa12.1□□□□□ -0.47
XRCC1-201ENST00000262887 CGB3P0DN86 165 aa12.1□□□□□ -0.47
XRCC1-201ENST00000262887 CGB7P0DN87 165 aa12.1□□□□□ -0.47
XRCC1-201ENST00000262887 UQCRFS1P47985 274 aa12.1□□□□□ -0.47
XRCC1-201ENST00000262887 RBPMS2Q6ZRY4 209 aaKnown RBP12.1□□□□□ -0.47
XRCC1-201ENST00000262887 PDPNQ86YL7 162 aa12.1□□□□□ -0.47
XRCC1-201ENST00000262887 C9orf118A6NHY6 69 aa12.09□□□□□ -0.47
XRCC1-201ENST00000262887 MOSP00540 346 aa12.09□□□□□ -0.47
XRCC1-201ENST00000262887 MYCNOSP40205 109 aa12.09□□□□□ -0.47
XRCC1-201ENST00000262887 PATE2Q6UY27 113 aa12.09□□□□□ -0.47
XRCC1-201ENST00000262887 BLNKQ8WV28 456 aa12.09□□□□□ -0.47
XRCC1-201ENST00000262887 ZNF48Q96MX3 618 aaPredicted RBP12.09□□□□□ -0.47
XRCC1-201ENST00000262887 GTSF1LQ9H1H1 148 aa12.09□□□□□ -0.47
XRCC1-201ENST00000262887 SIT1Q9Y3P8 196 aa12.09□□□□□ -0.47
XRCC1-201ENST00000262887 SMAGPQ0VAQ4 97 aa12.09□□□□□ -0.47
XRCC1-201ENST00000262887 TMEM177Q53S58 311 aa12.09□□□□□ -0.47
XRCC1-201ENST00000262887 TMEM105Q8N8V8 129 aa12.09□□□□□ -0.47
XRCC1-201ENST00000262887 CNEP1R1Q8N9A8 125 aa12.09□□□□□ -0.47
XRCC1-201ENST00000262887 MLST8Q9BVC4 326 aa12.09□□□□□ -0.47
XRCC1-201ENST00000262887 KLF12Q9Y4X4 402 aa12.09□□□□□ -0.47
XRCC1-201ENST00000262887 PGPA6NDG6 321 aa12.08□□□□□ -0.48
XRCC1-201ENST00000262887 A6NDN8 102 aa12.08□□□□□ -0.48
XRCC1-201ENST00000262887 H3BRM9 83 aa12.08□□□□□ -0.48
XRCC1-201ENST00000262887 ERHP84090 104 aaKnown RBP12.08□□□□□ -0.48
XRCC1-201ENST00000262887 GFRA4Q9GZZ7 299 aa12.08□□□□□ -0.48
XRCC1-201ENST00000262887 SELENOKQ9Y6D0 94 aa12.08□□□□□ -0.48
XRCC1-201ENST00000262887 MGAQ8IWI9 3026 aa12.08□□□□□ -0.48
XRCC1-201ENST00000262887 K7EP34 96 aa12.08□□□□□ -0.48
XRCC1-201ENST00000262887 IGHV3-48P01763 117 aa12.08□□□□□ -0.48
XRCC1-201ENST00000262887 CSN3P07498 182 aa12.08□□□□□ -0.48
XRCC1-201ENST00000262887 CT45A6P0DMU7 189 aa12.08□□□□□ -0.48
XRCC1-201ENST00000262887 CT45A5P0DMU8 189 aa12.08□□□□□ -0.48
XRCC1-201ENST00000262887 CT45A7P0DMV0 189 aa12.08□□□□□ -0.48
XRCC1-201ENST00000262887 MC5RP33032 325 aa12.08□□□□□ -0.48
XRCC1-201ENST00000262887 RAB9AP51151 201 aa12.08□□□□□ -0.48
XRCC1-201ENST00000262887 LINC00305Q7Z4B0 112 aa12.08□□□□□ -0.48
XRCC1-201ENST00000262887 DAZAP1Q96EP5 407 aaKnown RBP12.08□□□□□ -0.48
XRCC1-201ENST00000262887 JMJD8Q96S16 334 aa12.08□□□□□ -0.48
XRCC1-201ENST00000262887 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.07□□□□□ -0.48
XRCC1-201ENST00000262887 C19orf71A6NCJ1 209 aa12.07□□□□□ -0.48
XRCC1-201ENST00000262887 MBNL2Q5VZF2 373 aaKnown RBP12.07□□□□□ -0.48
XRCC1-201ENST00000262887 RBMXL3Q8N7X1 1067 aaKnown RBP12.07□□□□□ -0.48
XRCC1-201ENST00000262887 MDS2Q8NDY4 140 aa12.07□□□□□ -0.48
XRCC1-201ENST00000262887 NPIPB3Q92617 1050 aa12.07□□□□□ -0.48
XRCC1-201ENST00000262887 ZNF492Q9P255 531 aa12.07□□□□□ -0.48
XRCC1-201ENST00000262887 TCRBV4S1A1TA0A5B7 111 aa12.07□□□□□ -0.48
XRCC1-201ENST00000262887 H3BUT2 72 aa12.07□□□□□ -0.48
XRCC1-201ENST00000262887 PLP1P60201 277 aa12.07□□□□□ -0.48
XRCC1-201ENST00000262887 MOGAT3Q86VF5 341 aa12.07□□□□□ -0.48
XRCC1-201ENST00000262887 RND1Q92730 232 aa12.07□□□□□ -0.48
XRCC1-201ENST00000262887 FSTL3O95633 263 aa12.06□□□□□ -0.48
XRCC1-201ENST00000262887 TMEM95Q3KNT9 176 aa12.06□□□□□ -0.48
XRCC1-201ENST00000262887 MAFAQ8NHW3 353 aaPredicted RBP12.06□□□□□ -0.48
XRCC1-201ENST00000262887 NEU4Q8WWR8 484 aaPredicted RBP12.06□□□□□ -0.48
XRCC1-201ENST00000262887 AHCTF1Q8WYP5 2266 aa12.06□□□□□ -0.48
XRCC1-201ENST00000262887 CRYBA4P53673 196 aa12.06□□□□□ -0.48
XRCC1-201ENST00000262887 FAM201AQ5SY85 155 aa12.06□□□□□ -0.48
XRCC1-201ENST00000262887 BHLHA15Q7RTS1 189 aaPredicted RBP12.06□□□□□ -0.48
XRCC1-201ENST00000262887 STXBP6Q8NFX7 210 aa12.06□□□□□ -0.48
XRCC1-201ENST00000262887 ZNF747Q9BV97 191 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms