RNA–Protein interactions for RNA: ENSMUST00000002043.9

Ccdc47-201, Transcript of Coiled-coil domain-containing protein 47, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc47, Length 5,193 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc47-201ENSMUST00000002043 Sulf2Q8CFG0 875 aa7.98□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 PaxxQ8K0Y7 205 aa7.98□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Prelid3aQ8VE85 172 aa7.98□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Chchd1Q9CQA6 118 aa7.98□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Mrpl18Q9CQL5 180 aa7.98□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 SdhcQ9CZB0 169 aaKnown RBP7.98□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 DynapQ9D7M5 161 aa7.98□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Ctxnd2A0A1B0GQX3 59 aa7.97□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 R3hdmlA2A5I3 253 aa7.97□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 P01809 118 aa7.97□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Trav8d-1Q5R1H8 112 aa7.97□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Ifna11Q61716 190 aa7.97□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Slc16a4Q8R0M8 500 aa7.97□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Map1lc3aQ91VR7 121 aa7.97□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Cldn16Q925N4 235 aa7.97□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 MmdQ9CQY7 238 aa7.97□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Tmem88Q9D0N8 159 aa7.97□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Ascl3Q9JJR7 174 aa7.97□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Vmn1r27K7N688 303 aa7.97□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 P01759 136 aa7.97□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Ercc8Q8CFD5 397 aa7.97□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 RhovQ8VDU1 236 aa7.97□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Olfr1256Q8VGP1 306 aa7.97□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Ms4a3Q920C4 213 aa7.97□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 NtmQ99PJ0 344 aa7.97□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Otud1Q9CUB6 454 aa7.97□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Spink14B9EJP9 96 aa7.97□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Gprin2D3Z1D7 455 aa7.97□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Nat8f4G5E8L3 226 aa7.97□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Ascl4M0QW46 144 aa7.97□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 OtpO09113 325 aa7.97□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Ins1P01325 108 aa7.97□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Dhrs13Q5SS80 376 aa7.97□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Sox21Q811W0 276 aa7.97□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Pam16Q9CQV1 125 aa7.97□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Psg18B2RSG7 476 aa7.97□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 P18524 117 aa7.97□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Lyl1P27792 278 aa7.97□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Plp1P60202 277 aa7.97□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 ClcP97400 68 aa7.97□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Slc35b1P97858 322 aa7.97□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Dhrs11Q3U0B3 260 aa7.97□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Olfr91Q7TRL3 312 aa7.97□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Mettl27Q8BGM4 238 aa7.97□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Zc3h3Q8CHP0 950 aa7.97□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Olfr482Q8VG03 323 aa7.97□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Ceacam11Q9D0Z8 303 aa7.97□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Rbmxl2Q9DAE2 385 aaKnown RBP7.97□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Scgb1b19F6WYW0 93 aa7.96□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 LalbaP29752 143 aa7.96□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Defa9P50707 93 aa7.96□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Rpl8P62918 257 aaKnown RBP7.96□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Alkbh6Q8K2U2 238 aa7.96□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Olfr123Q8VFQ1 309 aa7.96□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Sp7Q8VI67 428 aa7.96□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Vmn1r46Q9EQ45 309 aa7.96□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Gpa33Q9JKA5 319 aa7.96□□□□□ -1.13
Ccdc47-201ENSMUST00000002043 Rpl36-ps4A0A140T8U4 117 aa7.96□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 Olfr1104A2AVB5 310 aa7.96□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 Gm5741B2RVA4 72 aa7.96□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 Rdh16O54909 317 aa7.96□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 P01822 137 aa7.96□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 Cdkn1bP46414 197 aa7.96□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 Tcl1b1P56840 116 aa7.96□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 MetrnQ8C1Q4 291 aa7.96□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 Olfr1295Q8VF48 312 aa7.96□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 Olfr1440Q8VFV4 315 aa7.96□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 9130008F23RikQ9D2Z6 181 aa7.96□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 Tmem183Q9JJB9 375 aa7.96□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 Sumo3Q9Z172 110 aa7.96□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 Plcxd2B2RXA1 340 aa7.96□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 Smlr1J3QMJ4 66 aa7.96□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 Cdx1P18111 268 aa7.96□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 AesP63002 197 aa7.96□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 Eif4ebp2P70445 120 aa7.96□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 Wfdc6aQ3UW55 136 aa7.96□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 Olfr93Q6UAH1 312 aa7.96□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 Tmem106bQ80X71 275 aa7.96□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 Cldn10Q9Z0S6 231 aa7.96□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 Myo7aP97479 2215 aa7.96□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 Lilra6A0A0B4J1F3 663 aa7.96□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 Zfp433A0A0J9YUD4 600 aa7.96□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 Gm32687A0A1W2P6H7 600 aa7.96□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 Znf48Q3US17 591 aa7.96□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 Igfbp7Q61581 281 aa7.96□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 Mob4Q6PEB6 225 aa7.96□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 Tmem101Q91VP7 257 aa7.96□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 Ppp1r1aQ9ERT9 171 aa7.96□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 Gm45736A0A1B0GS18 427 aa7.95□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 A930017K11RikE0CXQ2 571 aa7.95□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 LipiF6YQT7 476 aa7.95□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 Gm5916G5E8W5 102 aa7.95□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 MscO88940 201 aa7.95□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 P01635 115 aa7.95□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 P01667 111 aa7.95□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 P01796 113 aa7.95□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 P01797 113 aa7.95□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 P01799 113 aa7.95□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 Wnt1P04426 370 aa7.95□□□□□ -1.14
Ccdc47-201ENSMUST00000002043 TbpP29037 316 aa7.95□□□□□ -1.14
Retrieved 100 of 22,080 RNA–protein pairs in 59.3 ms