RNA–Protein interactions for RNA: ENST00000640652.1

SCN3A-210, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

TSL 5

Gene SCN3A, Length 8,825 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-210ENST00000640652 GFRA4Q9GZZ7 299 aa4.58□□□□□ -1.68
SCN3A-210ENST00000640652 GNB4Q9HAV0 340 aa4.58□□□□□ -1.68
SCN3A-210ENST00000640652 MGAQ8IWI9 3026 aa4.58□□□□□ -1.68
SCN3A-210ENST00000640652 KIR2DL5BA0A0G2JN68 375 aa4.58□□□□□ -1.68
SCN3A-210ENST00000640652 KIR2DL5BA0A0G2JPC4 375 aa4.58□□□□□ -1.68
SCN3A-210ENST00000640652 RPL27AP46776 148 aaKnown RBP4.58□□□□□ -1.68
SCN3A-210ENST00000640652 BSPH1Q075Z2 132 aa4.58□□□□□ -1.68
SCN3A-210ENST00000640652 GAGE1Q13065 139 aa4.58□□□□□ -1.68
SCN3A-210ENST00000640652 ZNF124Q15973 351 aa4.58□□□□□ -1.68
SCN3A-210ENST00000640652 KIR2DL5AQ8N109 375 aa4.58□□□□□ -1.68
SCN3A-210ENST00000640652 AP5S1Q9NUS5 200 aa4.58□□□□□ -1.68
SCN3A-210ENST00000640652 MUC4Q99102 2169 aa4.57□□□□□ -1.68
SCN3A-210ENST00000640652 NKX2-8O15522 239 aa4.57□□□□□ -1.68
SCN3A-210ENST00000640652 GNG7O60262 68 aa4.57□□□□□ -1.68
SCN3A-210ENST00000640652 LINC00614P0C842 121 aa4.57□□□□□ -1.68
SCN3A-210ENST00000640652 RNF224P0DH78 156 aa4.57□□□□□ -1.68
SCN3A-210ENST00000640652 LOXL3P58215 753 aa4.57□□□□□ -1.68
SCN3A-210ENST00000640652 DEFB124Q8NES8 71 aa4.57□□□□□ -1.68
SCN3A-210ENST00000640652 GPR82Q96P67 336 aa4.57□□□□□ -1.68
SCN3A-210ENST00000640652 PMCHL2Q9BQD1 86 aa4.57□□□□□ -1.68
SCN3A-210ENST00000640652 SIAH2O43255 324 aa4.57□□□□□ -1.68
SCN3A-210ENST00000640652 CD3EP07766 207 aa4.57□□□□□ -1.68
SCN3A-210ENST00000640652 CD40P25942 277 aa4.57□□□□□ -1.68
SCN3A-210ENST00000640652 SCGB2A2Q13296 93 aa4.57□□□□□ -1.68
SCN3A-210ENST00000640652 SLC25A34Q6PIV7 304 aa4.57□□□□□ -1.68
SCN3A-210ENST00000640652 C11orf42Q8N5U0 333 aa4.57□□□□□ -1.68
SCN3A-210ENST00000640652 NUP37Q8NFH4 326 aa4.57□□□□□ -1.68
SCN3A-210ENST00000640652 TRGV9Q99603 122 aa4.57□□□□□ -1.68
SCN3A-210ENST00000640652 CRIM1Q9NZV1 1036 aa4.57□□□□□ -1.68
SCN3A-210ENST00000640652 LSM4Q9Y4Z0 139 aaKnown RBP4.57□□□□□ -1.68
SCN3A-210ENST00000640652 MTORP42345 2549 aa4.57□□□□□ -1.68
SCN3A-210ENST00000640652 A0A1B0GUT8 65 aa4.57□□□□□ -1.68
SCN3A-210ENST00000640652 PSG9Q00887 426 aa4.57□□□□□ -1.68
SCN3A-210ENST00000640652 TNFRSF14Q92956 283 aa4.57□□□□□ -1.68
SCN3A-210ENST00000640652 FBLL1A6NHQ2 334 aaKnown RBP4.57□□□□□ -1.68
SCN3A-210ENST00000640652 IGLV1-44P01699 117 aa4.57□□□□□ -1.68
SCN3A-210ENST00000640652 KIR2DL2P43627 348 aaPredicted RBP4.57□□□□□ -1.68
SCN3A-210ENST00000640652 RPS20P60866 119 aaKnown RBP4.57□□□□□ -1.68
SCN3A-210ENST00000640652 YPEL3P61236 119 aaPredicted RBP4.57□□□□□ -1.68
SCN3A-210ENST00000640652 NHLH1Q02575 133 aa4.57□□□□□ -1.68
SCN3A-210ENST00000640652 ATP1A1-AS1Q5TC04 95 aa4.57□□□□□ -1.68
SCN3A-210ENST00000640652 C5orf24Q7Z6I8 188 aa4.57□□□□□ -1.68
SCN3A-210ENST00000640652 CIARTQ8N365 385 aaPredicted RBP4.57□□□□□ -1.68
SCN3A-210ENST00000640652 MRPL20Q9BYC9 149 aaKnown RBP4.57□□□□□ -1.68
SCN3A-210ENST00000640652 FGF23Q9GZV9 251 aaPredicted RBP4.57□□□□□ -1.68
SCN3A-210ENST00000640652 RPUSD1Q9UJJ7 312 aaKnown RBP4.57□□□□□ -1.68
SCN3A-210ENST00000640652 COLQQ9Y215 455 aaPredicted RBP4.57□□□□□ -1.68
SCN3A-210ENST00000640652 ZFP30Q9Y2G7 519 aa4.57□□□□□ -1.68
SCN3A-210ENST00000640652 SLC25A15Q9Y619 301 aa4.57□□□□□ -1.68
SCN3A-210ENST00000640652 SERTM2A0A1B0GWG4 89 aa4.57□□□□□ -1.68
SCN3A-210ENST00000640652 SMIM27A0A1W2PRY6 76 aa4.57□□□□□ -1.68
SCN3A-210ENST00000640652 HLA-DRB1P01911 266 aa4.57□□□□□ -1.68
SCN3A-210ENST00000640652 Q8TCH9 128 aa4.57□□□□□ -1.68
SCN3A-210ENST00000640652 MBD3L4A6NDZ8 208 aaPredicted RBP4.57□□□□□ -1.68
SCN3A-210ENST00000640652 MBD3L3A6NE82 208 aaPredicted RBP4.57□□□□□ -1.68
SCN3A-210ENST00000640652 MBD3L5A6NJ08 208 aaPredicted RBP4.57□□□□□ -1.68
SCN3A-210ENST00000640652 C19orf67A6NJJ6 358 aa4.57□□□□□ -1.68
SCN3A-210ENST00000640652 TMEM97Q5BJF2 176 aa4.57□□□□□ -1.68
SCN3A-210ENST00000640652 TEX43Q6ZNM6 134 aa4.57□□□□□ -1.68
SCN3A-210ENST00000640652 PRNTQ86SH4 94 aa4.57□□□□□ -1.68
SCN3A-210ENST00000640652 TMEM256Q8N2U0 113 aa4.57□□□□□ -1.68
SCN3A-210ENST00000640652 MBD3L2Q8NHZ7 208 aaPredicted RBP4.57□□□□□ -1.68
SCN3A-210ENST00000640652 TRAV30A0A087WSZ9 112 aa4.57□□□□□ -1.68
SCN3A-210ENST00000640652 TRAV9-2A0A087WT02 112 aa4.57□□□□□ -1.68
SCN3A-210ENST00000640652 IFITM10A6NMD0 228 aa4.57□□□□□ -1.68
SCN3A-210ENST00000640652 VDAC2P45880 294 aaPredicted RBP4.57□□□□□ -1.68
SCN3A-210ENST00000640652 B9A039 149 aa4.56□□□□□ -1.68
SCN3A-210ENST00000640652 NBEAP1P0C6P0 100 aa4.56□□□□□ -1.68
SCN3A-210ENST00000640652 RNF151Q2KHN1 245 aa4.56□□□□□ -1.68
SCN3A-210ENST00000640652 FAM222BQ8WU58 562 aa4.56□□□□□ -1.68
SCN3A-210ENST00000640652 SLC25A33Q9BSK2 321 aa4.56□□□□□ -1.68
SCN3A-210ENST00000640652 J3QR89 54 aa4.56□□□□□ -1.68
SCN3A-210ENST00000640652 CD59P13987 128 aa4.56□□□□□ -1.68
SCN3A-210ENST00000640652 RAB9AP51151 201 aa4.56□□□□□ -1.68
SCN3A-210ENST00000640652 PSMG4Q5JS54 123 aa4.56□□□□□ -1.68
SCN3A-210ENST00000640652 LEMD1Q68G75 181 aa4.56□□□□□ -1.68
SCN3A-210ENST00000640652 WIPF2Q8TF74 440 aaPredicted RBP4.56□□□□□ -1.68
SCN3A-210ENST00000640652 VPS25Q9BRG1 176 aa4.56□□□□□ -1.68
SCN3A-210ENST00000640652 NAV2Q8IVL1 2488 aa4.56□□□□□ -1.68
SCN3A-210ENST00000640652 H0YJW9 148 aa4.56□□□□□ -1.68
SCN3A-210ENST00000640652 GPX1P07203 203 aa4.56□□□□□ -1.68
SCN3A-210ENST00000640652 RPL15P61313 204 aaKnown RBP4.56□□□□□ -1.68
SCN3A-210ENST00000640652 MMDQ15546 238 aa4.56□□□□□ -1.68
SCN3A-210ENST00000640652 ZNF295-AS1Q8N0V1 137 aa4.56□□□□□ -1.68
SCN3A-210ENST00000640652 TDGF1P13385 188 aa4.56□□□□□ -1.68
SCN3A-210ENST00000640652 RPL7P18124 248 aaKnown RBP4.56□□□□□ -1.68
SCN3A-210ENST00000640652 DTX1Q86Y01 620 aa4.56□□□□□ -1.68
SCN3A-210ENST00000640652 DMDP11532 3685 aa4.56□□□□□ -1.68
SCN3A-210ENST00000640652 C17orf100A8MU93 164 aa4.56□□□□□ -1.68
SCN3A-210ENST00000640652 Q9H3A6 140 aa4.56□□□□□ -1.68
SCN3A-210ENST00000640652 RALYQ9UKM9 306 aaKnown RBP4.56□□□□□ -1.68
SCN3A-210ENST00000640652 V9GYV3 84 aa4.56□□□□□ -1.68
SCN3A-210ENST00000640652 TRAV3A0A0B4J244 114 aa4.56□□□□□ -1.68
SCN3A-210ENST00000640652 CDX4O14627 284 aaPredicted RBP4.56□□□□□ -1.68
SCN3A-210ENST00000640652 LHBP01229 141 aa4.56□□□□□ -1.68
SCN3A-210ENST00000640652 IGKV1-16P04430 117 aa4.56□□□□□ -1.68
SCN3A-210ENST00000640652 RNFT1Q5M7Z0 435 aa4.56□□□□□ -1.68
SCN3A-210ENST00000640652 FAM216BQ8N7L0 139 aa4.56□□□□□ -1.68
SCN3A-210ENST00000640652 ORAOV1Q8WV07 137 aa4.56□□□□□ -1.68
SCN3A-210ENST00000640652 SSBP3Q9BWW4 388 aaPredicted RBP4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms