RNA–Protein interactions for RNA: ENST00000635835.1

CACNB4-215, Transcript of calcium voltage-gated channel auxiliary subunit beta 4, human

TSL 5

Gene CACNB4, Length 1,807 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNB4-215	ENST00000635835	FOXA3	P55318	350 aa	Predicted RBP	6.39	□□□□□ -1.39
CACNB4-215	ENST00000635835	FBXW4	P57775	412 aa		6.39	□□□□□ -1.39
CACNB4-215	ENST00000635835	C6orf201	Q7Z4U5	140 aa		6.39	□□□□□ -1.39
CACNB4-215	ENST00000635835	ABHD12	Q8N2K0	398 aa		6.39	□□□□□ -1.39
CACNB4-215	ENST00000635835	FAM57A	Q8TBR7	257 aa		6.39	□□□□□ -1.39
CACNB4-215	ENST00000635835	LIME1	Q9H400	295 aa		6.39	□□□□□ -1.39
CACNB4-215	ENST00000635835	KLK5	Q9Y337	293 aa	Predicted RBP	6.39	□□□□□ -1.39
CACNB4-215	ENST00000635835	GREB1	Q4ZG55	1949 aa		6.39	□□□□□ -1.39
CACNB4-215	ENST00000635835	SMCHD1	A6NHR9	2005 aa		6.39	□□□□□ -1.39
CACNB4-215	ENST00000635835	ANAPC1	Q9H1A4	1944 aa		6.39	□□□□□ -1.39
CACNB4-215	ENST00000635835	TRAV8-2	A0A0B4J237	113 aa		6.39	□□□□□ -1.39
CACNB4-215	ENST00000635835	SH2D7	A6NKC9	451 aa	Predicted RBP	6.39	□□□□□ -1.39
CACNB4-215	ENST00000635835	C15orf62	A8K5M9	175 aa		6.39	□□□□□ -1.39
CACNB4-215	ENST00000635835	C17orf51	A8MQB3	221 aa		6.39	□□□□□ -1.39
CACNB4-215	ENST00000635835		H3BSH0	61 aa		6.39	□□□□□ -1.39
CACNB4-215	ENST00000635835		M0QZQ0	153 aa		6.39	□□□□□ -1.39
CACNB4-215	ENST00000635835	HMGN2	P05204	90 aa	Known RBP	6.39	□□□□□ -1.39
CACNB4-215	ENST00000635835	PFN2	P35080	140 aa		6.39	□□□□□ -1.39
CACNB4-215	ENST00000635835	ZC2HC1B	Q5TFG8	222 aa		6.39	□□□□□ -1.39
CACNB4-215	ENST00000635835	POM121L12	Q8N7R1	296 aa		6.39	□□□□□ -1.39
CACNB4-215	ENST00000635835	PDF	Q9HBH1	243 aa		6.39	□□□□□ -1.39
CACNB4-215	ENST00000635835	IGLV3-10	A0A075B6K4	115 aa		6.38	□□□□□ -1.39
CACNB4-215	ENST00000635835	TRAV2	A0A0B4J234	112 aa		6.38	□□□□□ -1.39
CACNB4-215	ENST00000635835	LINC01553	A4QN01	128 aa		6.38	□□□□□ -1.39
CACNB4-215	ENST00000635835	ZFAND5	O76080	213 aa		6.38	□□□□□ -1.39
CACNB4-215	ENST00000635835	OXT	P01178	125 aa		6.38	□□□□□ -1.39
CACNB4-215	ENST00000635835	LGALS1	P09382	135 aa	Known RBP	6.38	□□□□□ -1.39
CACNB4-215	ENST00000635835	PRDX1	Q06830	199 aa	Known RBP	6.38	□□□□□ -1.39
CACNB4-215	ENST00000635835	IER5L	Q5T953	404 aa		6.38	□□□□□ -1.39
CACNB4-215	ENST00000635835	TMEM200B	Q69YZ2	307 aa		6.38	□□□□□ -1.39
CACNB4-215	ENST00000635835	MFSD12	Q6NUT3	480 aa		6.38	□□□□□ -1.39
CACNB4-215	ENST00000635835	KCTD18	Q6PI47	426 aa	Predicted RBP	6.38	□□□□□ -1.39
CACNB4-215	ENST00000635835	ADAMTSL4	Q6UY14	1074 aa		6.38	□□□□□ -1.39
CACNB4-215	ENST00000635835	ZAR1	Q86SH2	424 aa		6.38	□□□□□ -1.39
CACNB4-215	ENST00000635835	RPS19BP1	Q86WX3	136 aa	Known RBP	6.38	□□□□□ -1.39
CACNB4-215	ENST00000635835	ZNF295-AS1	Q8N0V1	137 aa		6.38	□□□□□ -1.39
CACNB4-215	ENST00000635835	C1orf147	Q96MC9	270 aa	Predicted RBP	6.38	□□□□□ -1.39
CACNB4-215	ENST00000635835	TCF19	Q9Y242	345 aa		6.38	□□□□□ -1.39
CACNB4-215	ENST00000635835	LHFPL6	Q9Y693	200 aa		6.38	□□□□□ -1.39
CACNB4-215	ENST00000635835	PAPPA2	Q9BXP8	1791 aa		6.38	□□□□□ -1.39
CACNB4-215	ENST00000635835	SCO2	A0A1W2PP80	73 aa		6.37	□□□□□ -1.39
CACNB4-215	ENST00000635835		K7EM74	188 aa		6.37	□□□□□ -1.39
CACNB4-215	ENST00000635835	SPINK4	O60575	86 aa		6.37	□□□□□ -1.39
CACNB4-215	ENST00000635835	LMX1B	O60663	402 aa		6.37	□□□□□ -1.39
CACNB4-215	ENST00000635835	PSMB8	P28062	276 aa		6.37	□□□□□ -1.39
CACNB4-215	ENST00000635835	SSR4	P51571	173 aa		6.37	□□□□□ -1.39
CACNB4-215	ENST00000635835	FAM27E3	Q08E93	113 aa		6.37	□□□□□ -1.39
CACNB4-215	ENST00000635835	RSPO1	Q2MKA7	263 aa	Predicted RBP	6.37	□□□□□ -1.39
CACNB4-215	ENST00000635835	ZNF493	Q6ZR52	646 aa		6.37	□□□□□ -1.39
CACNB4-215	ENST00000635835	AMN1	Q8IY45	258 aa		6.37	□□□□□ -1.39
CACNB4-215	ENST00000635835	MBD3L2	Q8NHZ7	208 aa	Predicted RBP	6.37	□□□□□ -1.39
CACNB4-215	ENST00000635835	FAM173A	Q9BQD7	235 aa		6.37	□□□□□ -1.39
CACNB4-215	ENST00000635835	BEX4	Q9NWD9	120 aa	Predicted RBP	6.37	□□□□□ -1.39
CACNB4-215	ENST00000635835		R4GMQ9	66 aa		6.37	□□□□□ -1.39
CACNB4-215	ENST00000635835	GTF3C1	Q12789	2109 aa		6.37	□□□□□ -1.39
CACNB4-215	ENST00000635835	MED12L	Q86YW9	2145 aa		6.37	□□□□□ -1.39
CACNB4-215	ENST00000635835	IGKV6D-21	A0A0A0MT36	114 aa		6.36	□□□□□ -1.39
CACNB4-215	ENST00000635835	TRAV8-4	A0A0B4J246	113 aa		6.36	□□□□□ -1.39
CACNB4-215	ENST00000635835	TMEM178B	H3BS89	294 aa		6.36	□□□□□ -1.39
CACNB4-215	ENST00000635835	SRSF10	O75494	262 aa	Known RBP	6.36	□□□□□ -1.39
CACNB4-215	ENST00000635835	IL4	P05112	153 aa		6.36	□□□□□ -1.39
CACNB4-215	ENST00000635835	GCHFR	P30047	84 aa		6.36	□□□□□ -1.39
CACNB4-215	ENST00000635835	GDF5OS	Q5U4N7	250 aa		6.36	□□□□□ -1.39
CACNB4-215	ENST00000635835	LINC00114	Q6XXX2	140 aa		6.36	□□□□□ -1.39
CACNB4-215	ENST00000635835		Q6ZSR3	168 aa		6.36	□□□□□ -1.39
CACNB4-215	ENST00000635835	FAM231D	Q6ZW35	169 aa		6.36	□□□□□ -1.39
CACNB4-215	ENST00000635835	TNS1	Q9HBL0	1735 aa	Known RBP	6.36	□□□□□ -1.39
CACNB4-215	ENST00000635835	IGKV6-21	A0A0C4DH24	114 aa		6.36	□□□□□ -1.39
CACNB4-215	ENST00000635835	FAM240A	A0A1B0GVK7	77 aa		6.36	□□□□□ -1.39
CACNB4-215	ENST00000635835	CDX4	O14627	284 aa	Predicted RBP	6.36	□□□□□ -1.39
CACNB4-215	ENST00000635835	CHEK1	O14757	476 aa		6.36	□□□□□ -1.39
CACNB4-215	ENST00000635835	NXPH3	O95157	252 aa		6.36	□□□□□ -1.39
CACNB4-215	ENST00000635835		P04436	131 aa		6.36	□□□□□ -1.39
CACNB4-215	ENST00000635835	RPL13A	P40429	203 aa	Known RBP	6.36	□□□□□ -1.39
CACNB4-215	ENST00000635835	NXPH1	P58417	271 aa		6.36	□□□□□ -1.39
CACNB4-215	ENST00000635835	UBE2D3	P61077	147 aa		6.36	□□□□□ -1.39
CACNB4-215	ENST00000635835	UBE2D2	P62837	147 aa		6.36	□□□□□ -1.39
CACNB4-215	ENST00000635835	RNF144B	Q7Z419	303 aa		6.36	□□□□□ -1.39
CACNB4-215	ENST00000635835	PCP2	Q8IVA1	136 aa		6.36	□□□□□ -1.39
CACNB4-215	ENST00000635835	STH	Q8IWL8	128 aa		6.36	□□□□□ -1.39
CACNB4-215	ENST00000635835	IL17D	Q8TAD2	202 aa		6.36	□□□□□ -1.39
CACNB4-215	ENST00000635835	RND1	Q92730	232 aa		6.36	□□□□□ -1.39
CACNB4-215	ENST00000635835	PSENEN	Q9NZ42	101 aa		6.36	□□□□□ -1.39
CACNB4-215	ENST00000635835	PLXNA2	O75051	1894 aa		6.36	□□□□□ -1.39
CACNB4-215	ENST00000635835	DOCK9	Q9BZ29	2069 aa		6.35	□□□□□ -1.39
CACNB4-215	ENST00000635835	IGKV1D-8	A0A087WSZ0	117 aa		6.35	□□□□□ -1.39
CACNB4-215	ENST00000635835	TRAV8-1	A0A0A6YYK1	113 aa		6.35	□□□□□ -1.39
CACNB4-215	ENST00000635835	TRAV13-1	A0A0B4J241	112 aa		6.35	□□□□□ -1.39
CACNB4-215	ENST00000635835		A0A1B0GXF2	115 aa		6.35	□□□□□ -1.39
CACNB4-215	ENST00000635835	FAM90A20P	A6NIJ5	464 aa		6.35	□□□□□ -1.39
CACNB4-215	ENST00000635835	FCGR3B	O75015	233 aa		6.35	□□□□□ -1.39
CACNB4-215	ENST00000635835	NDUFC2	O95298	119 aa		6.35	□□□□□ -1.39
CACNB4-215	ENST00000635835	C1orf105	O95561	183 aa		6.35	□□□□□ -1.39
CACNB4-215	ENST00000635835	TNFRSF4	P43489	277 aa		6.35	□□□□□ -1.39
CACNB4-215	ENST00000635835	CCL11	P51671	97 aa		6.35	□□□□□ -1.39
CACNB4-215	ENST00000635835	NCBP2	P52298	156 aa	Known RBP eCLIP	6.35	□□□□□ -1.39	8e-7	■■■■□ 26.3
CACNB4-215	ENST00000635835	CD164	Q04900	197 aa		6.35	□□□□□ -1.39
CACNB4-215	ENST00000635835	OR1C1	Q15619	314 aa		6.35	□□□□□ -1.39
CACNB4-215	ENST00000635835	CST6	Q15828	149 aa		6.35	□□□□□ -1.39
CACNB4-215	ENST00000635835	C9orf57	Q5W0N0	161 aa		6.35	□□□□□ -1.39

Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms