RNA–Protein interactions for RNA: ENST00000635835.1

CACNB4-215, Transcript of calcium voltage-gated channel auxiliary subunit beta 4, human

TSL 5

Gene CACNB4, Length 1,807 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNB4-215	ENST00000635835	PELP1	Q8IZL8	1130 aa	Known RBP	14.66	□□□□□ -0.06
CACNB4-215	ENST00000635835	MYT1	Q01538	1121 aa		14.57	□□□□□ -0.08
CACNB4-215	ENST00000635835	TTBK1	Q5TCY1	1321 aa	Predicted RBP	14.12	□□□□□ -0.15
CACNB4-215	ENST00000635835	SLC24A1	O60721	1099 aa		13.48	□□□□□ -0.25
CACNB4-215	ENST00000635835	PRKCSH	P14314	528 aa	Predicted RBP	13.47	□□□□□ -0.25
CACNB4-215	ENST00000635835	ERICH6	Q7L0X2	663 aa		13.41	□□□□□ -0.26
CACNB4-215	ENST00000635835	APLP2	Q06481	763 aa		13.36	□□□□□ -0.27
CACNB4-215	ENST00000635835	HRC	P23327	699 aa		13.15	□□□□□ -0.3
CACNB4-215	ENST00000635835	BCL11A	Q9H165	835 aa		13.04	□□□□□ -0.32
CACNB4-215	ENST00000635835	DAXX	Q9UER7	740 aa	Predicted RBP	12.93	□□□□□ -0.34
CACNB4-215	ENST00000635835	SCAF1	Q9H7N4	1312 aa	Known RBP	12.93	□□□□□ -0.34
CACNB4-215	ENST00000635835	FAM9A	Q8IZU1	332 aa	Predicted RBP	12.82	□□□□□ -0.36
CACNB4-215	ENST00000635835	AEBP2	Q6ZN18	517 aa	Predicted RBP	12.7	□□□□□ -0.38
CACNB4-215	ENST00000635835	CENPB	P07199	599 aa	Predicted RBP	12.65	□□□□□ -0.38
CACNB4-215	ENST00000635835	EIF5B	O60841	1220 aa	Known RBP	12.49	□□□□□ -0.41
CACNB4-215	ENST00000635835	PPARGC1B	Q86YN6	1023 aa	Known RBP	12.48	□□□□□ -0.41
CACNB4-215	ENST00000635835	NISCH	Q9Y2I1	1504 aa		12.41	□□□□□ -0.42
CACNB4-215	ENST00000635835	ACIN1	Q9UKV3	1341 aa	Known RBP	12.39	□□□□□ -0.43
CACNB4-215	ENST00000635835	ANP32E	Q9BTT0	268 aa		12.36	□□□□□ -0.43
CACNB4-215	ENST00000635835	UBE2Q2	Q8WVN8	375 aa		12.25	□□□□□ -0.45
CACNB4-215	ENST00000635835	CHIC1	Q5VXU3	224 aa		12.21	□□□□□ -0.46
CACNB4-215	ENST00000635835	GTF3C3	Q9Y5Q9	886 aa		12.21	□□□□□ -0.46
CACNB4-215	ENST00000635835	ZEB1	P37275	1124 aa	Predicted RBP	12.2	□□□□□ -0.46
CACNB4-215	ENST00000635835	NEUROD1	Q13562	356 aa		12.15	□□□□□ -0.46
CACNB4-215	ENST00000635835	CSRNP3	Q8WYN3	585 aa		12.11	□□□□□ -0.47
CACNB4-215	ENST00000635835	PCGF6	Q9BYE7	350 aa		12.07	□□□□□ -0.48
CACNB4-215	ENST00000635835	PLEKHG5	O94827	1062 aa		12.05	□□□□□ -0.48
CACNB4-215	ENST00000635835	ANO8	Q9HCE9	1232 aa	Predicted RBP	11.97	□□□□□ -0.49
CACNB4-215	ENST00000635835	PODXL2	Q9NZ53	605 aa		11.97	□□□□□ -0.49
CACNB4-215	ENST00000635835	NCBP3	Q53F19	620 aa	Known RBP	11.96	□□□□□ -0.49
CACNB4-215	ENST00000635835	PKNOX2	Q96KN3	472 aa		11.9	□□□□□ -0.5
CACNB4-215	ENST00000635835	ERICH6B	Q5W0A0	696 aa		11.87	□□□□□ -0.51
CACNB4-215	ENST00000635835	ARX	Q96QS3	562 aa		11.82	□□□□□ -0.52
CACNB4-215	ENST00000635835	MYT1L	Q9UL68	1186 aa		11.81	□□□□□ -0.52
CACNB4-215	ENST00000635835	RANGAP1	P46060	587 aa	Predicted RBP	11.79	□□□□□ -0.52
CACNB4-215	ENST00000635835	CCDC180	Q9P1Z9	1646 aa		11.76	□□□□□ -0.53
CACNB4-215	ENST00000635835	DCAF1	Q9Y4B6	1507 aa		11.75	□□□□□ -0.53
CACNB4-215	ENST00000635835	CLSPN	Q9HAW4	1339 aa		11.74	□□□□□ -0.53
CACNB4-215	ENST00000635835	MYO15B	Q96JP2	1530 aa		11.71	□□□□□ -0.53
CACNB4-215	ENST00000635835	NEFL	P07196	543 aa		11.7	□□□□□ -0.54
CACNB4-215	ENST00000635835	TSHZ2	Q9NRE2	1034 aa		11.7	□□□□□ -0.54
CACNB4-215	ENST00000635835	SALL2	Q9Y467	1007 aa	Predicted RBP	11.69	□□□□□ -0.54
CACNB4-215	ENST00000635835	TRIM26	Q12899	539 aa	Predicted RBP	11.65	□□□□□ -0.55
CACNB4-215	ENST00000635835	PDIA4	P13667	645 aa	Known RBP	11.59	□□□□□ -0.55
CACNB4-215	ENST00000635835	KLHL34	Q8N239	644 aa		11.59	□□□□□ -0.55
CACNB4-215	ENST00000635835	PDE4C	Q08493	712 aa		11.56	□□□□□ -0.56
CACNB4-215	ENST00000635835	CCDC136	Q96JN2	1154 aa		11.53	□□□□□ -0.56
CACNB4-215	ENST00000635835	DIEXF	Q68CQ4	756 aa	Known RBP	11.48	□□□□□ -0.57
CACNB4-215	ENST00000635835	DEK	P35659	375 aa	Known RBP	11.46	□□□□□ -0.58
CACNB4-215	ENST00000635835	FGD1	P98174	961 aa		11.46	□□□□□ -0.58
CACNB4-215	ENST00000635835	TIMELESS	Q9UNS1	1208 aa		11.42	□□□□□ -0.58
CACNB4-215	ENST00000635835	SUPT16H	Q9Y5B9	1047 aa	Known RBP	11.42	□□□□□ -0.58
CACNB4-215	ENST00000635835	GLIPR1L2	Q4G1C9	344 aa		11.42	□□□□□ -0.58
CACNB4-215	ENST00000635835	TAF7L	Q5H9L4	462 aa		11.38	□□□□□ -0.59
CACNB4-215	ENST00000635835	HOMEZ	Q8IX15	550 aa		11.36	□□□□□ -0.59
CACNB4-215	ENST00000635835	AAMP	Q13685	434 aa		11.33	□□□□□ -0.6
CACNB4-215	ENST00000635835	RTN4	Q9NQC3	1192 aa	Known RBP	11.33	□□□□□ -0.6
CACNB4-215	ENST00000635835	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	11.32	□□□□□ -0.6
CACNB4-215	ENST00000635835	BCL11B	Q9C0K0	894 aa	Predicted RBP	11.31	□□□□□ -0.6
CACNB4-215	ENST00000635835	ZMYND15	Q9H091	742 aa		11.31	□□□□□ -0.6
CACNB4-215	ENST00000635835	RBM19	Q9Y4C8	960 aa	Known RBP	11.29	□□□□□ -0.6
CACNB4-215	ENST00000635835	FANCI	Q9NVI1	1328 aa		11.29	□□□□□ -0.6
CACNB4-215	ENST00000635835	MSH5	O43196	834 aa		11.28	□□□□□ -0.6
CACNB4-215	ENST00000635835	TRIM41	Q8WV44	630 aa		11.28	□□□□□ -0.6
CACNB4-215	ENST00000635835	PLPPR3	Q6T4P5	718 aa		11.25	□□□□□ -0.61
CACNB4-215	ENST00000635835	POTED	Q86YR6	584 aa		11.25	□□□□□ -0.61
CACNB4-215	ENST00000635835	RSPH6A	Q9H0K4	717 aa		11.24	□□□□□ -0.61
CACNB4-215	ENST00000635835	RBM10	P98175	930 aa	Known RBP	11.23	□□□□□ -0.61
CACNB4-215	ENST00000635835		A0A0U1RQG5	324 aa	Predicted RBP	11.19	□□□□□ -0.62
CACNB4-215	ENST00000635835	YTHDC1	Q96MU7	727 aa	Known RBP	11.17	□□□□□ -0.62
CACNB4-215	ENST00000635835	TULP1	O00294	542 aa	Predicted RBP	11.16	□□□□□ -0.62
CACNB4-215	ENST00000635835	ZNF326	Q5BKZ1	582 aa	Known RBP	11.16	□□□□□ -0.62
CACNB4-215	ENST00000635835	VSIG10	Q8N0Z9	540 aa		11.16	□□□□□ -0.62
CACNB4-215	ENST00000635835	RSPH4A	Q5TD94	716 aa		11.15	□□□□□ -0.62
CACNB4-215	ENST00000635835	BRD2	P25440	801 aa	Known RBP	11.14	□□□□□ -0.63
CACNB4-215	ENST00000635835	IL27	Q8NEV9	243 aa		11.14	□□□□□ -0.63
CACNB4-215	ENST00000635835	C11orf95	C9JLR9	678 aa	Predicted RBP	11.11	□□□□□ -0.63
CACNB4-215	ENST00000635835	CCER1	Q8TC90	406 aa	Predicted RBP	11.09	□□□□□ -0.63
CACNB4-215	ENST00000635835	ZNF316	A6NFI3	1004 aa	Predicted RBP	11.08	□□□□□ -0.64
CACNB4-215	ENST00000635835	CHMP4A	Q9BY43	222 aa		11.07	□□□□□ -0.64
CACNB4-215	ENST00000635835	NPM2	Q86SE8	214 aa	Known RBP	11.06	□□□□□ -0.64
CACNB4-215	ENST00000635835	AMER1	Q5JTC6	1135 aa	Predicted RBP	11.02	□□□□□ -0.65
CACNB4-215	ENST00000635835	MIER1	Q8N108	512 aa		11.02	□□□□□ -0.65
CACNB4-215	ENST00000635835	EHMT2	Q96KQ7	1210 aa		11.02	□□□□□ -0.65
CACNB4-215	ENST00000635835	SAMD1	Q6SPF0	538 aa	Predicted RBP	10.98	□□□□□ -0.65
CACNB4-215	ENST00000635835	NAP1L5	Q96NT1	182 aa	Predicted RBP	10.97	□□□□□ -0.65
CACNB4-215	ENST00000635835	DHX37	Q8IY37	1157 aa	Known RBP	10.96	□□□□□ -0.65
CACNB4-215	ENST00000635835	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	10.95	□□□□□ -0.66
CACNB4-215	ENST00000635835	RRP9	O43818	475 aa	Known RBP	10.93	□□□□□ -0.66
CACNB4-215	ENST00000635835	SENP3	Q9H4L4	574 aa	Predicted RBP	10.93	□□□□□ -0.66
CACNB4-215	ENST00000635835	NAP1L2	Q9ULW6	460 aa	Predicted RBP	10.93	□□□□□ -0.66
CACNB4-215	ENST00000635835	CDK11A	Q9UQ88	783 aa	Predicted RBP	10.93	□□□□□ -0.66
CACNB4-215	ENST00000635835	CNKSR2	Q8WXI2	1034 aa		10.93	□□□□□ -0.66
CACNB4-215	ENST00000635835	FBXO3	Q9UK99	471 aa		10.93	□□□□□ -0.66
CACNB4-215	ENST00000635835	WASHC2C	Q9Y4E1	1318 aa		10.92	□□□□□ -0.66
CACNB4-215	ENST00000635835	RTL5	Q5HYW3	569 aa	Predicted RBP	10.92	□□□□□ -0.66
CACNB4-215	ENST00000635835	BCCIP	Q9P287	314 aa	Known RBP eCLIP	10.91	□□□□□ -0.66
CACNB4-215	ENST00000635835	IPO4	Q8TEX9	1081 aa	Known RBP	10.9	□□□□□ -0.66
CACNB4-215	ENST00000635835	C14orf37	Q86TY3	774 aa		10.89	□□□□□ -0.67
CACNB4-215	ENST00000635835	WASHC2A	Q641Q2	1341 aa		10.88	□□□□□ -0.67

Retrieved 100 of 20,778 RNA–protein pairs in 123.4 ms