RNA–Protein interactions for RNA: ENST00000619564.3

FGFR1-241, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 5 BASIC

Gene FGFR1, Length 5,482 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-241ENST00000619564 MBD3L2Q8NHZ7 208 aaPredicted RBP16.7■□□□□ 0.26
FGFR1-241ENST00000619564 INTS1Q8N201 2190 aaKnown RBP16.7■□□□□ 0.26
FGFR1-241ENST00000619564 ESPL1Q14674 2120 aa16.7■□□□□ 0.26
FGFR1-241ENST00000619564 A0A087WWC5 75 aa16.7■□□□□ 0.26
FGFR1-241ENST00000619564 NUDT10Q8NFP7 164 aa16.7■□□□□ 0.26
FGFR1-241ENST00000619564 RNF5Q99942 180 aa16.7■□□□□ 0.26
FGFR1-241ENST00000619564 J3QRE1 110 aa16.69■□□□□ 0.26
FGFR1-241ENST00000619564 ID3Q02535 119 aa16.69■□□□□ 0.26
FGFR1-241ENST00000619564 PARD6GQ9BYG4 376 aaPredicted RBP16.69■□□□□ 0.26
FGFR1-241ENST00000619564 RPL23P62829 140 aaKnown RBP16.69■□□□□ 0.26
FGFR1-241ENST00000619564 H3BUX3 64 aa16.69■□□□□ 0.26
FGFR1-241ENST00000619564 Q6ZS92 163 aa16.69■□□□□ 0.26
FGFR1-241ENST00000619564 MSRB2Q9Y3D2 182 aa16.69■□□□□ 0.26
FGFR1-241ENST00000619564 M0R1W7 72 aa16.69■□□□□ 0.26
FGFR1-241ENST00000619564 RNF126Q9BV68 326 aa16.69■□□□□ 0.26
FGFR1-241ENST00000619564 CHD5Q8TDI0 1954 aa16.69■□□□□ 0.26
FGFR1-241ENST00000619564 EFNB3Q15768 340 aa16.69■□□□□ 0.26
FGFR1-241ENST00000619564 IGKV3D-20A0A0C4DH25 116 aa16.68■□□□□ 0.26
FGFR1-241ENST00000619564 CD5P06127 495 aa16.68■□□□□ 0.26
FGFR1-241ENST00000619564 SLC25A16P16260 332 aa16.68■□□□□ 0.26
FGFR1-241ENST00000619564 SRSF1Q07955 248 aaKnown RBP eCLIP16.68■□□□□ 0.26
FGFR1-241ENST00000619564 MPZP25189 248 aa16.68■□□□□ 0.26
FGFR1-241ENST00000619564 WDR83OSQ9Y284 106 aa16.68■□□□□ 0.26
FGFR1-241ENST00000619564 DOCK4Q8N1I0 1966 aa16.68■□□□□ 0.26
FGFR1-241ENST00000619564 TRPM7Q96QT4 1865 aa16.67■□□□□ 0.26
FGFR1-241ENST00000619564 BRD3OSQ6XYD6 125 aa16.67■□□□□ 0.26
FGFR1-241ENST00000619564 IGKV1D-8A0A087WSZ0 117 aa16.67■□□□□ 0.26
FGFR1-241ENST00000619564 UBE2DNLQ8IWF7 75 aa16.67■□□□□ 0.26
FGFR1-241ENST00000619564 CD177Q8N6Q3 437 aa16.67■□□□□ 0.26
FGFR1-241ENST00000619564 NUDT11Q96G61 164 aa16.67■□□□□ 0.26
FGFR1-241ENST00000619564 NEUROG3Q9Y4Z2 214 aa16.67■□□□□ 0.26
FGFR1-241ENST00000619564 GHRHP01286 108 aa16.67■□□□□ 0.26
FGFR1-241ENST00000619564 SPSB3Q6PJ21 355 aa16.67■□□□□ 0.26
FGFR1-241ENST00000619564 CYSLTR1Q9Y271 337 aa16.67■□□□□ 0.26
FGFR1-241ENST00000619564 CEP250Q9BV73 2442 aa16.67■□□□□ 0.26
FGFR1-241ENST00000619564 ERVK11-1P61568 191 aa16.66■□□□□ 0.26
FGFR1-241ENST00000619564 TTC32Q5I0X7 151 aa16.66■□□□□ 0.26
FGFR1-241ENST00000619564 WFDC12Q8WWY7 111 aa16.66■□□□□ 0.26
FGFR1-241ENST00000619564 CHCHD5Q9BSY4 110 aa16.66■□□□□ 0.26
FGFR1-241ENST00000619564 OSTCQ9NRP0 149 aa16.66■□□□□ 0.26
FGFR1-241ENST00000619564 PEF1Q9UBV8 284 aaKnown RBP16.66■□□□□ 0.26
FGFR1-241ENST00000619564 C10orf55Q5SWW7 151 aa16.66■□□□□ 0.26
FGFR1-241ENST00000619564 ALPK2Q86TB3 2170 aa16.66■□□□□ 0.26
FGFR1-241ENST00000619564 PPBPP02775 128 aa16.66■□□□□ 0.26
FGFR1-241ENST00000619564 OR9G4Q8NGQ1 327 aa16.66■□□□□ 0.26
FGFR1-241ENST00000619564 LCTP09848 1927 aa16.66■□□□□ 0.26
FGFR1-241ENST00000619564 ZNF415Q09FC8 603 aa16.66■□□□□ 0.26
FGFR1-241ENST00000619564 SEPSECSQ9HD40 501 aaKnown RBP16.66■□□□□ 0.26
FGFR1-241ENST00000619564 PGPEP1Q9NXJ5 209 aa16.66■□□□□ 0.26
FGFR1-241ENST00000619564 RALGAPA1Q6GYQ0 2036 aa16.66■□□□□ 0.26
FGFR1-241ENST00000619564 PPIFP30405 207 aaKnown RBP16.65■□□□□ 0.26
FGFR1-241ENST00000619564 F2Z2F3 143 aa16.65■□□□□ 0.26
FGFR1-241ENST00000619564 PSPNO60542 156 aa16.65■□□□□ 0.26
FGFR1-241ENST00000619564 IGHG3P01860 377 aa16.65■□□□□ 0.26
FGFR1-241ENST00000619564 BMPERQ8N8U9 685 aa16.65■□□□□ 0.26
FGFR1-241ENST00000619564 PDCD11Q14690 1871 aaKnown RBP16.65■□□□□ 0.26
FGFR1-241ENST00000619564 SLC25A20O43772 301 aa16.65■□□□□ 0.26
FGFR1-241ENST00000619564 CLPSP04118 112 aa16.65■□□□□ 0.26
FGFR1-241ENST00000619564 SRSF6Q13247 344 aaKnown RBP16.65■□□□□ 0.26
FGFR1-241ENST00000619564 SLC25A48Q6ZT89 311 aaKnown RBP16.65■□□□□ 0.26
FGFR1-241ENST00000619564 EP300Q09472 2414 aaPredicted RBP16.65■□□□□ 0.26
FGFR1-241ENST00000619564 TSPAN13O95857 204 aa16.65■□□□□ 0.26
FGFR1-241ENST00000619564 FAM19A2Q8N3H0 131 aa16.65■□□□□ 0.26
FGFR1-241ENST00000619564 NXT2Q9NPJ8 142 aaKnown RBP16.65■□□□□ 0.26
FGFR1-241ENST00000619564 DMRT1Q9Y5R6 373 aa16.65■□□□□ 0.26
FGFR1-241ENST00000619564 THADAQ6YHU6 1953 aa16.65■□□□□ 0.26
FGFR1-241ENST00000619564 SNAI2O43623 268 aa16.64■□□□□ 0.25
FGFR1-241ENST00000619564 SDK2Q58EX2 2172 aa16.64■□□□□ 0.25
FGFR1-241ENST00000619564 C1QTNF9P0C862 333 aa16.64■□□□□ 0.25
FGFR1-241ENST00000619564 ORMDL2Q53FV1 153 aa16.64■□□□□ 0.25
FGFR1-241ENST00000619564 KIR3DL3Q8N743 410 aa16.64■□□□□ 0.25
FGFR1-241ENST00000619564 C14orf144Q96I85 54 aa16.64■□□□□ 0.25
FGFR1-241ENST00000619564 PRADC1Q9BSG0 188 aa16.64■□□□□ 0.25
FGFR1-241ENST00000619564 SCN8AQ9UQD0 1980 aa16.64■□□□□ 0.25
FGFR1-241ENST00000619564 DOCK6Q96HP0 2047 aa16.64■□□□□ 0.25
FGFR1-241ENST00000619564 CD28P10747 220 aa16.64■□□□□ 0.25
FGFR1-241ENST00000619564 LINC00518Q8N0U6 118 aa16.64■□□□□ 0.25
FGFR1-241ENST00000619564 TMEM8BA6NDV4 472 aa16.64■□□□□ 0.25
FGFR1-241ENST00000619564 LINC01356Q8N9X3 169 aa16.64■□□□□ 0.25
FGFR1-241ENST00000619564 TMEM190Q8WZ59 177 aa16.64■□□□□ 0.25
FGFR1-241ENST00000619564 SSBP4Q9BWG4 385 aaPredicted RBP16.64■□□□□ 0.25
FGFR1-241ENST00000619564 IGKV1-27A0A075B6S5 117 aa16.63■□□□□ 0.25
FGFR1-241ENST00000619564 APOMO95445 188 aa16.63■□□□□ 0.25
FGFR1-241ENST00000619564 BTCP35070 178 aa16.63■□□□□ 0.25
FGFR1-241ENST00000619564 CNOT1A5YKK6 2376 aaKnown RBP16.63■□□□□ 0.25
FGFR1-241ENST00000619564 A0A1B0GWJ7 208 aa16.63■□□□□ 0.25
FGFR1-241ENST00000619564 CTAG1AP78358 180 aa16.63■□□□□ 0.25
FGFR1-241ENST00000619564 DEFB121Q5J5C9 76 aa16.63■□□□□ 0.25
FGFR1-241ENST00000619564 ADARB2-AS1A8MUL3 147 aa16.63■□□□□ 0.25
FGFR1-241ENST00000619564 TRBV7-1A0A0A6YYK4 115 aa16.63■□□□□ 0.25
FGFR1-241ENST00000619564 LILRA1O75019 489 aa16.63■□□□□ 0.25
FGFR1-241ENST00000619564 GAS1P54826 345 aa16.63■□□□□ 0.25
FGFR1-241ENST00000619564 C5orf64Q2M2E5 130 aa16.63■□□□□ 0.25
FGFR1-241ENST00000619564 TEX38Q6PEX7 206 aa16.63■□□□□ 0.25
FGFR1-241ENST00000619564 TREML4Q6UXN2 200 aa16.63■□□□□ 0.25
FGFR1-241ENST00000619564 GAFA1Q96PS6 74 aa16.63■□□□□ 0.25
FGFR1-241ENST00000619564 GFI1BQ5VTD9 330 aa16.62■□□□□ 0.25
FGFR1-241ENST00000619564 SSC4DQ8WTU2 575 aa16.62■□□□□ 0.25
FGFR1-241ENST00000619564 HBDP02042 147 aa16.62■□□□□ 0.25
FGFR1-241ENST00000619564 RPL15P61313 204 aaKnown RBP16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms