RNA–Protein interactions for RNA: ENST00000613642.4

CCL16-206, Transcript of C-C motif chemokine ligand 16, humanhuman

TSL 3

Gene CCL16, Length 687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL16-206ENST00000613642 PIANPQ8IYJ0 282 aa4.47□□□□□ -1.69
CCL16-206ENST00000613642 ZNF645Q8N7E2 425 aa4.47□□□□□ -1.69
CCL16-206ENST00000613642 TMEM99Q8N816 258 aa4.47□□□□□ -1.69
CCL16-206ENST00000613642 TSKUQ8WUA8 353 aa4.47□□□□□ -1.69
CCL16-206ENST00000613642 DLX4Q92988 240 aaPredicted RBP4.47□□□□□ -1.69
CCL16-206ENST00000613642 GNB4Q9HAV0 340 aa4.47□□□□□ -1.69
CCL16-206ENST00000613642 PDFQ9HBH1 243 aa4.47□□□□□ -1.69
CCL16-206ENST00000613642 PHPT1Q9NRX4 125 aaPredicted RBP4.47□□□□□ -1.69
CCL16-206ENST00000613642 TNFRSF19Q9NS68 423 aa4.47□□□□□ -1.69
CCL16-206ENST00000613642 RNF181Q9P0P0 153 aa4.47□□□□□ -1.69
CCL16-206ENST00000613642 RNF7Q9UBF6 113 aa4.47□□□□□ -1.69
CCL16-206ENST00000613642 LSM4Q9Y4Z0 139 aaKnown RBP4.47□□□□□ -1.69
CCL16-206ENST00000613642 KCNE3Q9Y6H6 103 aa4.47□□□□□ -1.69
CCL16-206ENST00000613642 V9GY05 133 aa4.47□□□□□ -1.69
CCL16-206ENST00000613642 BRCA1P38398 1863 aaKnown RBP4.46□□□□□ -1.7
CCL16-206ENST00000613642 DLEC1Q9Y238 1755 aa4.46□□□□□ -1.7
CCL16-206ENST00000613642 IGHV1-24A0A0C4DH33 117 aa4.46□□□□□ -1.7
CCL16-206ENST00000613642 M0QZQ0 153 aa4.46□□□□□ -1.7
CCL16-206ENST00000613642 EFNA2O43921 213 aa4.46□□□□□ -1.7
CCL16-206ENST00000613642 INSL3P51460 131 aa4.46□□□□□ -1.7
CCL16-206ENST00000613642 SP4Q02446 784 aa4.46□□□□□ -1.7
CCL16-206ENST00000613642 C22orf39Q6P5X5 142 aa4.46□□□□□ -1.7
CCL16-206ENST00000613642 SBSPONQ8IVN8 264 aa4.46□□□□□ -1.7
CCL16-206ENST00000613642 KLHDC9Q8NEP7 349 aa4.46□□□□□ -1.7
CCL16-206ENST00000613642 ZPLD1Q8TCW7 415 aa4.46□□□□□ -1.7
CCL16-206ENST00000613642 FGF13Q92913 245 aa4.46□□□□□ -1.7
CCL16-206ENST00000613642 DNAJA3Q96EY1 480 aa4.46□□□□□ -1.7
CCL16-206ENST00000613642 FMC1Q96HJ9 113 aa4.46□□□□□ -1.7
CCL16-206ENST00000613642 TMEM204Q9BSN7 226 aa4.46□□□□□ -1.7
CCL16-206ENST00000613642 RPP25Q9BUL9 199 aaKnown RBP4.46□□□□□ -1.7
CCL16-206ENST00000613642 PARP12Q9H0J9 701 aaKnown RBP4.46□□□□□ -1.7
CCL16-206ENST00000613642 TDRD15B5MCY1 1934 aaKnown RBP4.46□□□□□ -1.7
CCL16-206ENST00000613642 MYLKQ15746 1914 aa4.46□□□□□ -1.7
CCL16-206ENST00000613642 MCM3APO60318 1980 aa4.45□□□□□ -1.7
CCL16-206ENST00000613642 PLXNA4Q9HCM2 1894 aa4.45□□□□□ -1.7
CCL16-206ENST00000613642 ARFGEF1Q9Y6D6 1849 aa4.45□□□□□ -1.7
CCL16-206ENST00000613642 TRBV19A0A075B6N1 114 aa4.45□□□□□ -1.7
CCL16-206ENST00000613642 TCRBV5S1A1TA0A578 114 aa4.45□□□□□ -1.7
CCL16-206ENST00000613642 RBAKDNA6NC62 111 aa4.45□□□□□ -1.7
CCL16-206ENST00000613642 IZUMO1RA6ND01 250 aa4.45□□□□□ -1.7
CCL16-206ENST00000613642 C2orf70A6NJV1 201 aa4.45□□□□□ -1.7
CCL16-206ENST00000613642 A8MWV9 139 aa4.45□□□□□ -1.7
CCL16-206ENST00000613642 IGLL5B9A064 214 aa4.45□□□□□ -1.7
CCL16-206ENST00000613642 ATOX1O00244 68 aa4.45□□□□□ -1.7
CCL16-206ENST00000613642 PDCD6O75340 191 aa4.45□□□□□ -1.7
CCL16-206ENST00000613642 GASTP01350 101 aa4.45□□□□□ -1.7
CCL16-206ENST00000613642 ZNF20P17024 532 aa4.45□□□□□ -1.7
CCL16-206ENST00000613642 S100A3P33764 101 aa4.45□□□□□ -1.7
CCL16-206ENST00000613642 CSN1S1P47710 185 aa4.45□□□□□ -1.7
CCL16-206ENST00000613642 CLDN17P56750 224 aa4.45□□□□□ -1.7
CCL16-206ENST00000613642 HERV-K104P61576 105 aa4.45□□□□□ -1.7
CCL16-206ENST00000613642 CCL20P78556 96 aa4.45□□□□□ -1.7
CCL16-206ENST00000613642 TMEM187Q14656 261 aa4.45□□□□□ -1.7
CCL16-206ENST00000613642 LINC01545Q5VT33 79 aa4.45□□□□□ -1.7
CCL16-206ENST00000613642 TRNP1Q6NT89 227 aa4.45□□□□□ -1.7
CCL16-206ENST00000613642 IGFL2Q6UWQ7 119 aa4.45□□□□□ -1.7
CCL16-206ENST00000613642 PRR15Q8IV56 129 aa4.45□□□□□ -1.7
CCL16-206ENST00000613642 AMN1Q8IY45 258 aa4.45□□□□□ -1.7
CCL16-206ENST00000613642 CEND1Q8N111 149 aa4.45□□□□□ -1.7
CCL16-206ENST00000613642 DRAM1Q8N682 238 aa4.45□□□□□ -1.7
CCL16-206ENST00000613642 ATXN7L3BQ96GX2 97 aa4.45□□□□□ -1.7
CCL16-206ENST00000613642 ZC2HC1AQ96GY0 325 aa4.45□□□□□ -1.7
CCL16-206ENST00000613642 KXD1Q9BQD3 176 aa4.45□□□□□ -1.7
CCL16-206ENST00000613642 SHANK2-AS3Q9BTD1 123 aa4.45□□□□□ -1.7
CCL16-206ENST00000613642 PRRG4Q9BZD6 226 aa4.45□□□□□ -1.7
CCL16-206ENST00000613642 GNG13Q9P2W3 67 aa4.45□□□□□ -1.7
CCL16-206ENST00000613642 RPUSD1Q9UJJ7 312 aaKnown RBP4.45□□□□□ -1.7
CCL16-206ENST00000613642 ZNF256Q9Y2P7 627 aaPredicted RBP4.45□□□□□ -1.7
CCL16-206ENST00000613642 SERP1Q9Y6X1 66 aa4.45□□□□□ -1.7
CCL16-206ENST00000613642 UBR3Q6ZT12 1888 aa4.45□□□□□ -1.7
CCL16-206ENST00000613642 MAST2Q6P0Q8 1798 aa4.45□□□□□ -1.7
CCL16-206ENST00000613642 TICRRQ7Z2Z1 1910 aa4.44□□□□□ -1.7
CCL16-206ENST00000613642 MDFIC2A0A1B0GVS7 189 aa4.44□□□□□ -1.7
CCL16-206ENST00000613642 NCBP2LA6PVI3 153 aaKnown RBP4.44□□□□□ -1.7
CCL16-206ENST00000613642 KNCNA6PVL3 124 aa4.44□□□□□ -1.7
CCL16-206ENST00000613642 CPSF4O95639 269 aaKnown RBP4.44□□□□□ -1.7
CCL16-206ENST00000613642 GYPBP06028 91 aa4.44□□□□□ -1.7
CCL16-206ENST00000613642 SCGB1C2P0DMR2 95 aa4.44□□□□□ -1.7
CCL16-206ENST00000613642 COX6A1P12074 109 aa4.44□□□□□ -1.7
CCL16-206ENST00000613642 HLA-DRB4P13762 266 aa4.44□□□□□ -1.7
CCL16-206ENST00000613642 UBE2E1P51965 193 aa4.44□□□□□ -1.7
CCL16-206ENST00000613642 FBXW4P57775 412 aa4.44□□□□□ -1.7
CCL16-206ENST00000613642 HBG1P69891 147 aa4.44□□□□□ -1.7
CCL16-206ENST00000613642 HBG2P69892 147 aa4.44□□□□□ -1.7
CCL16-206ENST00000613642 ZNF117Q03924 483 aa4.44□□□□□ -1.7
CCL16-206ENST00000613642 FOXF2Q12947 444 aa4.44□□□□□ -1.7
CCL16-206ENST00000613642 TRIP6Q15654 476 aaKnown RBP4.44□□□□□ -1.7
CCL16-206ENST00000613642 RTL8BQ17RB0 113 aa4.44□□□□□ -1.7
CCL16-206ENST00000613642 PQLC2Q6ZP29 291 aa4.44□□□□□ -1.7
CCL16-206ENST00000613642 GTSCR1Q86UQ5 136 aa4.44□□□□□ -1.7
CCL16-206ENST00000613642 MMD2Q8IY49 270 aa4.44□□□□□ -1.7
CCL16-206ENST00000613642 OR2A1Q8NGT9 310 aa4.44□□□□□ -1.7
CCL16-206ENST00000613642 PHLDA1Q8WV24 401 aaPredicted RBP4.44□□□□□ -1.7
CCL16-206ENST00000613642 SRSF12Q8WXF0 261 aaKnown RBP4.44□□□□□ -1.7
CCL16-206ENST00000613642 NABP1Q96AH0 204 aa4.44□□□□□ -1.7
CCL16-206ENST00000613642 CHCHD1Q96BP2 118 aaKnown RBP4.44□□□□□ -1.7
CCL16-206ENST00000613642 ZNF689Q96CS4 500 aaPredicted RBP4.44□□□□□ -1.7
CCL16-206ENST00000613642 ABHD14BQ96IU4 210 aa4.44□□□□□ -1.7
CCL16-206ENST00000613642 UBE2E2Q96LR5 201 aa4.44□□□□□ -1.7
CCL16-206ENST00000613642 C8orf49Q96NF6 230 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms