RNA–Protein interactions for RNA: ENST00000596365.5

LINC00649-208, long intergenic non-protein coding RNA 649, humanhuman

TSL 5

Gene LINC00649, Length 682 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-208ENST00000596365 TGFBR1P36897 503 aa5.89□□□□□ -1.47
LINC00649-208ENST00000596365 P2RY1P47900 373 aa5.89□□□□□ -1.47
LINC00649-208ENST00000596365 HOXA1P49639 335 aaPredicted RBP5.89□□□□□ -1.47
LINC00649-208ENST00000596365 KRTAP10-1P60331 282 aa5.89□□□□□ -1.47
LINC00649-208ENST00000596365 ERVFC1-1P60608 527 aa5.89□□□□□ -1.47
LINC00649-208ENST00000596365 SNRPD3P62318 126 aaKnown RBP5.89□□□□□ -1.47
LINC00649-208ENST00000596365 IFITM3Q01628 133 aa5.89□□□□□ -1.47
LINC00649-208ENST00000596365 ST3GAL4Q11206 333 aa5.89□□□□□ -1.47
LINC00649-208ENST00000596365 INSL4Q14641 139 aa5.89□□□□□ -1.47
LINC00649-208ENST00000596365 RAB11BQ15907 218 aa5.89□□□□□ -1.47
LINC00649-208ENST00000596365 HSD17B12Q53GQ0 312 aa5.89□□□□□ -1.47
LINC00649-208ENST00000596365 ZNF600Q6ZNG1 722 aa5.89□□□□□ -1.47
LINC00649-208ENST00000596365 MS4A15Q8N5U1 240 aa5.89□□□□□ -1.47
LINC00649-208ENST00000596365 MOB3AQ96BX8 217 aa5.89□□□□□ -1.47
LINC00649-208ENST00000596365 NARS2Q96I59 477 aaKnown RBP5.89□□□□□ -1.47
LINC00649-208ENST00000596365 GPHA2Q96T91 129 aa5.89□□□□□ -1.47
LINC00649-208ENST00000596365 A0A075B6Q4 140 aa5.88□□□□□ -1.47
LINC00649-208ENST00000596365 LOC100506127A0A0U1RQW1 187 aa5.88□□□□□ -1.47
LINC00649-208ENST00000596365 HLA-DRB4P13762 266 aa5.88□□□□□ -1.47
LINC00649-208ENST00000596365 S100A5P33763 92 aa5.88□□□□□ -1.47
LINC00649-208ENST00000596365 C2orf76Q3KRA6 126 aa5.88□□□□□ -1.47
LINC00649-208ENST00000596365 SNX29P2Q8IUI4 249 aa5.88□□□□□ -1.47
LINC00649-208ENST00000596365 LYSMD2Q8IV50 215 aa5.88□□□□□ -1.47
LINC00649-208ENST00000596365 NUDT10Q8NFP7 164 aa5.88□□□□□ -1.47
LINC00649-208ENST00000596365 OR10R2Q8NGX6 335 aa5.88□□□□□ -1.47
LINC00649-208ENST00000596365 FAM3DQ96BQ1 224 aa5.88□□□□□ -1.47
LINC00649-208ENST00000596365 NUDT11Q96G61 164 aa5.88□□□□□ -1.47
LINC00649-208ENST00000596365 TMEM56Q96MV1 263 aa5.88□□□□□ -1.47
LINC00649-208ENST00000596365 METTL26Q96S19 204 aa5.88□□□□□ -1.47
LINC00649-208ENST00000596365 RAB22AQ9UL26 194 aa5.88□□□□□ -1.47
LINC00649-208ENST00000596365 PAIP2BQ9ULR5 123 aaKnown RBP5.88□□□□□ -1.47
LINC00649-208ENST00000596365 GOLT1BQ9Y3E0 138 aa5.88□□□□□ -1.47
LINC00649-208ENST00000596365 HLA-DRB4X5D2U9 266 aa5.88□□□□□ -1.47
LINC00649-208ENST00000596365 F5H768 121 aa5.87□□□□□ -1.47
LINC00649-208ENST00000596365 SULT1C2O00338 296 aa5.87□□□□□ -1.47
LINC00649-208ENST00000596365 MFNGO00587 321 aa5.87□□□□□ -1.47
LINC00649-208ENST00000596365 TNFSF12O43508 249 aa5.87□□□□□ -1.47
LINC00649-208ENST00000596365 ATP6V1G1O75348 118 aa5.87□□□□□ -1.47
LINC00649-208ENST00000596365 PTTG1O95997 202 aa5.87□□□□□ -1.47
LINC00649-208ENST00000596365 MT-CO2P00403 227 aa5.87□□□□□ -1.47
LINC00649-208ENST00000596365 IGHV3-48P01763 117 aa5.87□□□□□ -1.47
LINC00649-208ENST00000596365 HIST1H1DP16402 221 aaKnown RBP5.87□□□□□ -1.47
LINC00649-208ENST00000596365 DTYMKP23919 212 aa5.87□□□□□ -1.47
LINC00649-208ENST00000596365 CRYBB3P26998 211 aa5.87□□□□□ -1.47
LINC00649-208ENST00000596365 ETV6P41212 452 aa5.87□□□□□ -1.47
LINC00649-208ENST00000596365 NPBWR1P48145 328 aa5.87□□□□□ -1.47
LINC00649-208ENST00000596365 WNT4P56705 351 aa5.87□□□□□ -1.47
LINC00649-208ENST00000596365 FXYD7P58549 80 aa5.87□□□□□ -1.47
LINC00649-208ENST00000596365 ERVK-16P61578 105 aa5.87□□□□□ -1.47
LINC00649-208ENST00000596365 CATR1Q13166 79 aa5.87□□□□□ -1.47
LINC00649-208ENST00000596365 MSMO1Q15800 293 aa5.87□□□□□ -1.47
LINC00649-208ENST00000596365 RRN3P1Q2M238 152 aa5.87□□□□□ -1.47
LINC00649-208ENST00000596365 CADM3Q8N126 398 aa5.87□□□□□ -1.47
LINC00649-208ENST00000596365 MGLLQ99685 303 aa5.87□□□□□ -1.47
LINC00649-208ENST00000596365 C7orf50Q9BRJ6 194 aaKnown RBP5.87□□□□□ -1.47
LINC00649-208ENST00000596365 PLEKHA2Q9HB19 425 aa5.87□□□□□ -1.47
LINC00649-208ENST00000596365 SEPSECSQ9HD40 501 aaKnown RBP5.87□□□□□ -1.47
LINC00649-208ENST00000596365 ZNF586Q9NXT0 402 aa5.87□□□□□ -1.47
LINC00649-208ENST00000596365 OR51B2Q9Y5P1 312 aa5.87□□□□□ -1.47
LINC00649-208ENST00000596365 TMEM272A0A1B0GTI8 110 aa5.86□□□□□ -1.47
LINC00649-208ENST00000596365 A0A1B0GU03 582 aa5.86□□□□□ -1.47
LINC00649-208ENST00000596365 LYRM9A8MSI8 78 aa5.86□□□□□ -1.47
LINC00649-208ENST00000596365 MYL12BO14950 172 aa5.86□□□□□ -1.47
LINC00649-208ENST00000596365 UCHL1P09936 223 aa5.86□□□□□ -1.47
LINC00649-208ENST00000596365 HSMCR30P0CW71 290 aa5.86□□□□□ -1.47
LINC00649-208ENST00000596365 NAT1P18440 290 aa5.86□□□□□ -1.47
LINC00649-208ENST00000596365 AP2S1P53680 142 aaPredicted RBP5.86□□□□□ -1.47
LINC00649-208ENST00000596365 CLDN12P56749 244 aa5.86□□□□□ -1.47
LINC00649-208ENST00000596365 LINC00315P59091 139 aa5.86□□□□□ -1.47
LINC00649-208ENST00000596365 RNASE12Q5GAN4 147 aaKnown RBP5.86□□□□□ -1.47
LINC00649-208ENST00000596365 CNIH2Q6PI25 160 aa5.86□□□□□ -1.47
LINC00649-208ENST00000596365 Q6ZRN7 208 aaPredicted RBP5.86□□□□□ -1.47
LINC00649-208ENST00000596365 ZBTB34Q8NCN2 500 aa5.86□□□□□ -1.47
LINC00649-208ENST00000596365 DEFB104AQ8WTQ1 72 aa5.86□□□□□ -1.47
LINC00649-208ENST00000596365 PINX1Q96BK5 328 aaKnown RBP5.86□□□□□ -1.47
LINC00649-208ENST00000596365 GFI1Q99684 422 aa5.86□□□□□ -1.47
LINC00649-208ENST00000596365 UPK3BQ9BT76 320 aa5.86□□□□□ -1.47
LINC00649-208ENST00000596365 CCDC32Q9BV29 185 aa5.86□□□□□ -1.47
LINC00649-208ENST00000596365 MND1Q9BWT6 205 aa5.86□□□□□ -1.47
LINC00649-208ENST00000596365 FKBP11Q9NYL4 201 aa5.86□□□□□ -1.47
LINC00649-208ENST00000596365 COMMD9Q9P000 198 aa5.86□□□□□ -1.47
LINC00649-208ENST00000596365 LSM2Q9Y333 95 aaKnown RBP5.86□□□□□ -1.47
LINC00649-208ENST00000596365 LRP1Q07954 4544 aaKnown RBP5.86□□□□□ -1.47
LINC00649-208ENST00000596365 MARCH11A6NNE9 402 aa5.85□□□□□ -1.47
LINC00649-208ENST00000596365 FAM90A26D6RGX4 464 aa5.85□□□□□ -1.47
LINC00649-208ENST00000596365 SNAPC5O75971 98 aa5.85□□□□□ -1.47
LINC00649-208ENST00000596365 IGKV3-20P01619 116 aa5.85□□□□□ -1.47
LINC00649-208ENST00000596365 ATP5G1P05496 136 aa5.85□□□□□ -1.47
LINC00649-208ENST00000596365 GCSHP23434 173 aa5.85□□□□□ -1.47
LINC00649-208ENST00000596365 NKX2-1P43699 371 aaPredicted RBP5.85□□□□□ -1.47
LINC00649-208ENST00000596365 ATP5G3P48201 142 aa5.85□□□□□ -1.47
LINC00649-208ENST00000596365 DEFA1P59665 94 aa5.85□□□□□ -1.47
LINC00649-208ENST00000596365 DEFA3P59666 94 aa5.85□□□□□ -1.47
LINC00649-208ENST00000596365 CD300CQ08708 224 aa5.85□□□□□ -1.47
LINC00649-208ENST00000596365 MLLT11Q13015 90 aaPredicted RBP5.85□□□□□ -1.47
LINC00649-208ENST00000596365 ARL6IP1Q15041 203 aa5.85□□□□□ -1.47
LINC00649-208ENST00000596365 SPANXN2Q5MJ10 180 aa5.85□□□□□ -1.47
LINC00649-208ENST00000596365 CCDC190Q86UF4 302 aa5.85□□□□□ -1.47
LINC00649-208ENST00000596365 TPRA1Q86W33 373 aa5.85□□□□□ -1.47
LINC00649-208ENST00000596365 SECTM1Q8WVN6 248 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms