RNA–Protein interactions for RNA: ENST00000567320.1

CDH1-211, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-211ENST00000567320 CDKL4Q5MAI5 379 aa-0.21□□□□□ -2.44
CDH1-211ENST00000567320 SPANXN5Q5MJ07 72 aa-0.21□□□□□ -2.44
CDH1-211ENST00000567320 FAM74A1Q5RGS3 127 aa-0.21□□□□□ -2.44
CDH1-211ENST00000567320 AADACL4Q5VUY2 407 aa-0.21□□□□□ -2.44
CDH1-211ENST00000567320 CST9Q5W186 159 aa-0.21□□□□□ -2.44
CDH1-211ENST00000567320 GLT8D1Q68CQ7 371 aa-0.21□□□□□ -2.44
CDH1-211ENST00000567320 CLEC6AQ6EIG7 209 aa-0.21□□□□□ -2.44
CDH1-211ENST00000567320 C10orf99Q6UWK7 81 aa-0.21□□□□□ -2.44
CDH1-211ENST00000567320 TMEM14EPQ6UXP3 125 aa-0.21□□□□□ -2.44
CDH1-211ENST00000567320 PATE2Q6UY27 113 aa-0.21□□□□□ -2.44
CDH1-211ENST00000567320 Q6ZS92 163 aa-0.21□□□□□ -2.44
CDH1-211ENST00000567320 ZCCHC23Q6ZST2 131 aa-0.21□□□□□ -2.44
CDH1-211ENST00000567320 HIST2H3AQ71DI3 136 aa-0.21□□□□□ -2.44
CDH1-211ENST00000567320 CRLF3Q8IUI8 442 aa-0.21□□□□□ -2.44
CDH1-211ENST00000567320 PRR15Q8IV56 129 aa-0.21□□□□□ -2.44
CDH1-211ENST00000567320 IQCF2Q8IXL9 164 aa-0.21□□□□□ -2.44
CDH1-211ENST00000567320 ATOH7Q8N100 152 aa-0.21□□□□□ -2.44
CDH1-211ENST00000567320 HIST3H2BBQ8N257 126 aa-0.21□□□□□ -2.44
CDH1-211ENST00000567320 ST6GALNAC3Q8NDV1 305 aa-0.21□□□□□ -2.44
CDH1-211ENST00000567320 ATP6V1C2Q8NEY4 427 aa-0.21□□□□□ -2.44
CDH1-211ENST00000567320 GPR32P1Q8NGA4 272 aa-0.21□□□□□ -2.44
CDH1-211ENST00000567320 JOSD2Q8TAC2 188 aa-0.21□□□□□ -2.44
CDH1-211ENST00000567320 PSMF1Q92530 271 aa-0.21□□□□□ -2.44
CDH1-211ENST00000567320 ROPN1LQ96C74 230 aa-0.21□□□□□ -2.44
CDH1-211ENST00000567320 OPTNQ96CV9 577 aa-0.21□□□□□ -2.44
CDH1-211ENST00000567320 SLAMF6Q96DU3 332 aa-0.21□□□□□ -2.44
CDH1-211ENST00000567320 KCTD7Q96MP8 289 aa-0.21□□□□□ -2.44
CDH1-211ENST00000567320 PPP1R2P1Q96PQ5 205 aa-0.21□□□□□ -2.44
CDH1-211ENST00000567320 DHRS9Q9BPW9 319 aa-0.21□□□□□ -2.44
CDH1-211ENST00000567320 GINS4Q9BRT9 223 aa-0.21□□□□□ -2.44
CDH1-211ENST00000567320 MAP1LC3AQ9H492 121 aa-0.21□□□□□ -2.44
CDH1-211ENST00000567320 ACER3Q9NUN7 267 aa-0.21□□□□□ -2.44
CDH1-211ENST00000567320 PLEKHJ1Q9NW61 149 aa-0.21□□□□□ -2.44
CDH1-211ENST00000567320 FBXL12Q9NXK8 326 aa-0.21□□□□□ -2.44
CDH1-211ENST00000567320 ORMDL1Q9P0S3 153 aa-0.21□□□□□ -2.44
CDH1-211ENST00000567320 TMEM14CQ9P0S9 112 aa-0.21□□□□□ -2.44
CDH1-211ENST00000567320 AK3Q9UIJ7 227 aa-0.21□□□□□ -2.44
CDH1-211ENST00000567320 PCTPQ9UKL6 214 aa-0.21□□□□□ -2.44
CDH1-211ENST00000567320 CFAP45Q9UL16 551 aa-0.21□□□□□ -2.44
CDH1-211ENST00000567320 TNFSF18Q9UNG2 199 aa-0.21□□□□□ -2.44
CDH1-211ENST00000567320 CYSLTR1Q9Y271 337 aa-0.21□□□□□ -2.44
CDH1-211ENST00000567320 HS3ST2Q9Y278 367 aa-0.21□□□□□ -2.44
CDH1-211ENST00000567320 POLR1DQ9Y2S0 133 aa-0.21□□□□□ -2.44
CDH1-211ENST00000567320 HIVEP3Q5T1R4 2406 aa-0.21□□□□□ -2.44
CDH1-211ENST00000567320 LAMC3Q9Y6N6 1575 aa-0.21□□□□□ -2.44
CDH1-211ENST00000567320 ALPK2Q86TB3 2170 aa-0.21□□□□□ -2.44
CDH1-211ENST00000567320 MUC4Q99102 2169 aa-0.21□□□□□ -2.44
CDH1-211ENST00000567320 EVC2Q86UK5 1308 aa-0.21□□□□□ -2.44
CDH1-211ENST00000567320 MYH7BA7E2Y1 1941 aa-0.21□□□□□ -2.44
CDH1-211ENST00000567320 USP54Q70EL1 1684 aa-0.21□□□□□ -2.44
CDH1-211ENST00000567320 CACNA1EQ15878 2313 aa-0.21□□□□□ -2.44
CDH1-211ENST00000567320 TNS1Q9HBL0 1735 aaKnown RBP-0.21□□□□□ -2.44
CDH1-211ENST00000567320 PIK3C2GO75747 1445 aa-0.21□□□□□ -2.44
CDH1-211ENST00000567320 NCOA1Q15788 1441 aa-0.21□□□□□ -2.44
CDH1-211ENST00000567320 LAMB1P07942 1786 aa-0.22□□□□□ -2.44
CDH1-211ENST00000567320 CEP164Q9UPV0 1460 aa-0.22□□□□□ -2.44
CDH1-211ENST00000567320 TTC28Q96AY4 2481 aa-0.22□□□□□ -2.44
CDH1-211ENST00000567320 MAP2P11137 1827 aaKnown RBP-0.22□□□□□ -2.44
CDH1-211ENST00000567320 NUP98P52948 1817 aa-0.22□□□□□ -2.44
CDH1-211ENST00000567320 CACNA1AO00555 2505 aa-0.22□□□□□ -2.44
CDH1-211ENST00000567320 NUP210LQ5VU65 1888 aa-0.22□□□□□ -2.44
CDH1-211ENST00000567320 DOCK5Q9H7D0 1870 aa-0.22□□□□□ -2.44
CDH1-211ENST00000567320 PCF11O94913 1555 aaKnown RBP-0.22□□□□□ -2.44
CDH1-211ENST00000567320 PTPRDP23468 1912 aa-0.22□□□□□ -2.44
CDH1-211ENST00000567320 MYLKQ15746 1914 aa-0.22□□□□□ -2.44
CDH1-211ENST00000567320 TRAV10A0A0B4J240 114 aa-0.22□□□□□ -2.44
CDH1-211ENST00000567320 TRAV26-2A0A0B4J265 109 aa-0.22□□□□□ -2.44
CDH1-211ENST00000567320 NBDYA0A0U1RRE5 68 aa-0.22□□□□□ -2.44
CDH1-211ENST00000567320 A0A1B0GW54 56 aa-0.22□□□□□ -2.44
CDH1-211ENST00000567320 TCRBV4S1A1TA0A5B7 111 aa-0.22□□□□□ -2.44
CDH1-211ENST00000567320 ZNF727A8MUV8 499 aa-0.22□□□□□ -2.44
CDH1-211ENST00000567320 ZNF879B4DU55 563 aa-0.22□□□□□ -2.44
CDH1-211ENST00000567320 EEF1E1-BLOC1S5C9J1V9 151 aa-0.22□□□□□ -2.44
CDH1-211ENST00000567320 CLDN25C9JDP6 229 aa-0.22□□□□□ -2.44
CDH1-211ENST00000567320 GOLGA8KD6RF30 607 aa-0.22□□□□□ -2.44
CDH1-211ENST00000567320 GOLGA6L19H0YKK7 550 aa-0.22□□□□□ -2.44
CDH1-211ENST00000567320 GOLGA8MH3BSY2 632 aa-0.22□□□□□ -2.44
CDH1-211ENST00000567320 GPR31O00270 319 aa-0.22□□□□□ -2.44
CDH1-211ENST00000567320 CHP2O43745 196 aa-0.22□□□□□ -2.44
CDH1-211ENST00000567320 STX10O60499 249 aa-0.22□□□□□ -2.44
CDH1-211ENST00000567320 TIMM17BO60830 172 aa-0.22□□□□□ -2.44
CDH1-211ENST00000567320 HMMRO75330 724 aa-0.22□□□□□ -2.44
CDH1-211ENST00000567320 SPINK1P00995 79 aa-0.22□□□□□ -2.44
CDH1-211ENST00000567320 HLA-DRB1P01911 266 aa-0.22□□□□□ -2.44
CDH1-211ENST00000567320 IL3P08700 152 aa-0.22□□□□□ -2.44
CDH1-211ENST00000567320 OR4E1P0C645 316 aa-0.22□□□□□ -2.44
CDH1-211ENST00000567320 BAALC-AS2P0C853 105 aa-0.22□□□□□ -2.44
CDH1-211ENST00000567320 PET100P0DJ07 73 aa-0.22□□□□□ -2.44
CDH1-211ENST00000567320 KCNE1P15382 129 aa-0.22□□□□□ -2.44
CDH1-211ENST00000567320 HIST1H1TP22492 207 aaPredicted RBP-0.22□□□□□ -2.44
CDH1-211ENST00000567320 PPIBP23284 216 aaKnown RBP-0.22□□□□□ -2.44
CDH1-211ENST00000567320 CASP1P29466 404 aa-0.22□□□□□ -2.44
CDH1-211ENST00000567320 DDTP30046 118 aa-0.22□□□□□ -2.44
CDH1-211ENST00000567320 SERPINB9P50453 376 aa-0.22□□□□□ -2.44
CDH1-211ENST00000567320 NKX2-5P52952 324 aaPredicted RBP-0.22□□□□□ -2.44
CDH1-211ENST00000567320 FXYD4P59646 89 aa-0.22□□□□□ -2.44
CDH1-211ENST00000567320 RAB5BP61020 215 aa-0.22□□□□□ -2.44
CDH1-211ENST00000567320 RPL37P61927 97 aaKnown RBP-0.22□□□□□ -2.44
CDH1-211ENST00000567320 POLR2GP62487 172 aaKnown RBP eCLIP-0.22□□□□□ -2.44
CDH1-211ENST00000567320 PMAIP1Q13794 54 aa-0.22□□□□□ -2.44
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms