RNA–Protein interactions for RNA: ENST00000566612.5

CDH1-210, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 4,138 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-210ENST00000566612 PAFAH1B2P68402 229 aa9.46□□□□□ -0.9
CDH1-210ENST00000566612 SEM1Q6ZVN7 128 aa9.46□□□□□ -0.9
CDH1-210ENST00000566612 RNASEH2CQ8TDP1 164 aaKnown RBP9.46□□□□□ -0.9
CDH1-210ENST00000566612 SPTBN4Q9H254 2564 aa9.46□□□□□ -0.9
CDH1-210ENST00000566612 CHD8Q9HCK8 2581 aa9.46□□□□□ -0.9
CDH1-210ENST00000566612 CGB1A6NKQ9 187 aa9.46□□□□□ -0.9
CDH1-210ENST00000566612 E7EQL1 145 aa9.46□□□□□ -0.9
CDH1-210ENST00000566612 KLRB1Q12918 225 aa9.46□□□□□ -0.9
CDH1-210ENST00000566612 FAM162BQ5T6X4 162 aa9.46□□□□□ -0.9
CDH1-210ENST00000566612 IGFL3Q6UXB1 125 aa9.46□□□□□ -0.9
CDH1-210ENST00000566612 C5orf17Q8NAS9 161 aa9.46□□□□□ -0.9
CDH1-210ENST00000566612 C5orf30Q96GV9 206 aa9.46□□□□□ -0.9
CDH1-210ENST00000566612 LINC00479Q96M42 142 aa9.46□□□□□ -0.9
CDH1-210ENST00000566612 VKORC1Q9BQB6 163 aa9.46□□□□□ -0.9
CDH1-210ENST00000566612 AMBPP02760 352 aa9.45□□□□□ -0.9
CDH1-210ENST00000566612 AARDQ4LEZ3 155 aa9.45□□□□□ -0.9
CDH1-210ENST00000566612 FAM19A2Q8N3H0 131 aa9.45□□□□□ -0.9
CDH1-210ENST00000566612 SRRM4A7MD48 611 aaKnown RBP9.45□□□□□ -0.9
CDH1-210ENST00000566612 SERF1AO75920 110 aa9.45□□□□□ -0.9
CDH1-210ENST00000566612 COL8A2P25067 703 aa9.45□□□□□ -0.9
CDH1-210ENST00000566612 DIAPH2-AS1Q14236 149 aa9.45□□□□□ -0.9
CDH1-210ENST00000566612 C2orf83Q53S99 150 aa9.45□□□□□ -0.9
CDH1-210ENST00000566612 TMEM256Q8N2U0 113 aa9.45□□□□□ -0.9
CDH1-210ENST00000566612 PARD6GQ9BYG4 376 aaPredicted RBP9.45□□□□□ -0.9
CDH1-210ENST00000566612 TIMM23O14925 209 aa9.45□□□□□ -0.9
CDH1-210ENST00000566612 AMY1AP04745 511 aa9.45□□□□□ -0.9
CDH1-210ENST00000566612 CEACAM8P31997 349 aaPredicted RBP9.45□□□□□ -0.9
CDH1-210ENST00000566612 ZNF672Q499Z4 452 aaPredicted RBP9.45□□□□□ -0.9
CDH1-210ENST00000566612 NEU1Q99519 415 aa9.45□□□□□ -0.9
CDH1-210ENST00000566612 IGLV3-9A0A075B6K5 115 aa9.44□□□□□ -0.9
CDH1-210ENST00000566612 IGHV3-49A0A0A0MS15 119 aa9.44□□□□□ -0.9
CDH1-210ENST00000566612 TCRBV4S1A1TA0A5B7 111 aa9.44□□□□□ -0.9
CDH1-210ENST00000566612 OR2J3O76001 311 aa9.44□□□□□ -0.9
CDH1-210ENST00000566612 LY6DQ14210 128 aa9.44□□□□□ -0.9
CDH1-210ENST00000566612 KLF17Q5JT82 389 aaPredicted RBP9.44□□□□□ -0.9
CDH1-210ENST00000566612 UNQ5815/PRO19632Q6UWF5 114 aa9.44□□□□□ -0.9
CDH1-210ENST00000566612 IGFL2Q6UWQ7 119 aa9.44□□□□□ -0.9
CDH1-210ENST00000566612 NUP37Q8NFH4 326 aa9.44□□□□□ -0.9
CDH1-210ENST00000566612 A0A1B0GUS0 222 aa9.44□□□□□ -0.9
CDH1-210ENST00000566612 PFN1P07737 140 aaKnown RBP9.44□□□□□ -0.9
CDH1-210ENST00000566612 RNASE2P10153 161 aaKnown RBP9.44□□□□□ -0.9
CDH1-210ENST00000566612 ZNF114Q8NC26 417 aa9.44□□□□□ -0.9
CDH1-210ENST00000566612 SSBP4Q9BWG4 385 aaPredicted RBP9.44□□□□□ -0.9
CDH1-210ENST00000566612 TMEM14BQ9NUH8 114 aa9.44□□□□□ -0.9
CDH1-210ENST00000566612 RNF24Q9Y225 148 aa9.44□□□□□ -0.9
CDH1-210ENST00000566612 IGHV2-26A0A0B4J1V2 119 aa9.44□□□□□ -0.9
CDH1-210ENST00000566612 MUC21A0A0G2JKD1 596 aa9.44□□□□□ -0.9
CDH1-210ENST00000566612 MUC21A0A140T8X8 626 aa9.44□□□□□ -0.9
CDH1-210ENST00000566612 LOC389332A0A1B0GUA5 103 aa9.44□□□□□ -0.9
CDH1-210ENST00000566612 AREGP15514 252 aa9.44□□□□□ -0.9
CDH1-210ENST00000566612 CFHR2P36980 270 aa9.44□□□□□ -0.9
CDH1-210ENST00000566612 MUC21Q5SSG8 566 aa9.44□□□□□ -0.9
CDH1-210ENST00000566612 CSPG4Q6UVK1 2322 aa9.43□□□□□ -0.9
CDH1-210ENST00000566612 MFAP4P55083 255 aa9.43□□□□□ -0.9
CDH1-210ENST00000566612 TCTAP57738 103 aa9.43□□□□□ -0.9
CDH1-210ENST00000566612 ODF3L1Q8IXM7 274 aa9.43□□□□□ -0.9
CDH1-210ENST00000566612 S100A4P26447 101 aaKnown RBP9.43□□□□□ -0.9
CDH1-210ENST00000566612 MAS1LP35410 378 aa9.43□□□□□ -0.9
CDH1-210ENST00000566612 GATA4P43694 442 aa9.43□□□□□ -0.9
CDH1-210ENST00000566612 DAZAP2Q15038 168 aaPredicted RBP9.43□□□□□ -0.9
CDH1-210ENST00000566612 C11orf1Q9H5F2 150 aa9.43□□□□□ -0.9
CDH1-210ENST00000566612 A0A1W2PRE2 83 aa9.43□□□□□ -0.9
CDH1-210ENST00000566612 SCGB2A2Q13296 93 aa9.43□□□□□ -0.9
CDH1-210ENST00000566612 C19orf35Q6ZS72 473 aa9.43□□□□□ -0.9
CDH1-210ENST00000566612 TCF24Q7RTU0 167 aa9.43□□□□□ -0.9
CDH1-210ENST00000566612 A0A1B0GV90 55 aa9.42□□□□□ -0.9
CDH1-210ENST00000566612 CD99P14209 185 aa9.42□□□□□ -0.9
CDH1-210ENST00000566612 KLRD1Q13241 179 aa9.42□□□□□ -0.9
CDH1-210ENST00000566612 RIGQ13278 110 aa9.42□□□□□ -0.9
CDH1-210ENST00000566612 KHDC1LQ5JSQ8 128 aa9.42□□□□□ -0.9
CDH1-210ENST00000566612 HIGD1CA8MV81 97 aa9.42□□□□□ -0.9
CDH1-210ENST00000566612 FAM106CPP0CH98 169 aa9.42□□□□□ -0.9
CDH1-210ENST00000566612 PRSS8Q16651 343 aa9.42□□□□□ -0.9
CDH1-210ENST00000566612 TMEM167AQ8TBQ9 72 aa9.42□□□□□ -0.9
CDH1-210ENST00000566612 IGHV3-66A0A0C4DH42 116 aa9.42□□□□□ -0.9
CDH1-210ENST00000566612 IGHV2-5P01817 119 aa9.42□□□□□ -0.9
CDH1-210ENST00000566612 OR5AL1P0C617 328 aa9.42□□□□□ -0.9
CDH1-210ENST00000566612 CA7P43166 264 aa9.42□□□□□ -0.9
CDH1-210ENST00000566612 ASPHD1Q5U4P2 390 aa9.42□□□□□ -0.9
CDH1-210ENST00000566612 Q9H3A6 140 aa9.42□□□□□ -0.9
CDH1-210ENST00000566612 GOSR1O95249 250 aa9.41□□□□□ -0.9
CDH1-210ENST00000566612 CNTFRP26992 372 aa9.41□□□□□ -0.9
CDH1-210ENST00000566612 UTF1Q5T230 341 aa9.41□□□□□ -0.9
CDH1-210ENST00000566612 TBL2Q9Y4P3 447 aaKnown RBP9.41□□□□□ -0.9
CDH1-210ENST00000566612 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP9.41□□□□□ -0.9
CDH1-210ENST00000566612 TCAPO15273 167 aa9.41□□□□□ -0.9
CDH1-210ENST00000566612 ZMAT5Q9UDW3 170 aaKnown RBP9.41□□□□□ -0.9
CDH1-210ENST00000566612 IGHV1-3A0A0C4DH29 117 aa9.41□□□□□ -0.9
CDH1-210ENST00000566612 COMPP49747 757 aaPredicted RBP9.41□□□□□ -0.9
CDH1-210ENST00000566612 NHLH1Q02575 133 aa9.41□□□□□ -0.9
CDH1-210ENST00000566612 JOSD1Q15040 202 aaPredicted RBP9.41□□□□□ -0.9
CDH1-210ENST00000566612 TPSG1Q9NRR2 321 aa9.41□□□□□ -0.9
CDH1-210ENST00000566612 NOTCH2Q04721 2471 aa9.41□□□□□ -0.9
CDH1-210ENST00000566612 ATG2AQ2TAZ0 1938 aa9.41□□□□□ -0.9
CDH1-210ENST00000566612 ZNF207O43670 478 aaKnown RBP9.41□□□□□ -0.9
CDH1-210ENST00000566612 FOXL1Q12952 345 aa9.41□□□□□ -0.9
CDH1-210ENST00000566612 ZNF295-AS1Q8N0V1 137 aa9.41□□□□□ -0.9
CDH1-210ENST00000566612 TEX45Q8NA69 505 aa9.41□□□□□ -0.9
CDH1-210ENST00000566612 EPDR1Q9UM22 224 aa9.41□□□□□ -0.9
CDH1-210ENST00000566612 UFC1Q9Y3C8 167 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms