RNA–Protein interactions for RNA: ENST00000558500.5

LRRC28-207, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-207ENST00000558500 SPHARQ15513 63 aa4.69□□□□□ -1.66
LRRC28-207ENST00000558500 Q6ZSN1 163 aa4.69□□□□□ -1.66
LRRC28-207ENST00000558500 TPRA1Q86W33 373 aa4.69□□□□□ -1.66
LRRC28-207ENST00000558500 C1orf158Q8N1D5 194 aa4.69□□□□□ -1.66
LRRC28-207ENST00000558500 BPIFB6Q8NFQ5 453 aa4.69□□□□□ -1.66
LRRC28-207ENST00000558500 GLMPQ8WWB7 406 aa4.69□□□□□ -1.66
LRRC28-207ENST00000558500 CYGBQ8WWM9 190 aa4.69□□□□□ -1.66
LRRC28-207ENST00000558500 UFD1Q92890 307 aa4.69□□□□□ -1.66
LRRC28-207ENST00000558500 TSC22D3Q99576 134 aa4.69□□□□□ -1.66
LRRC28-207ENST00000558500 ATG5Q9H1Y0 275 aa4.69□□□□□ -1.66
LRRC28-207ENST00000558500 SEPSECSQ9HD40 501 aaKnown RBP4.69□□□□□ -1.66
LRRC28-207ENST00000558500 FKBP14Q9NWM8 211 aa4.69□□□□□ -1.66
LRRC28-207ENST00000558500 FKBP11Q9NYL4 201 aa4.69□□□□□ -1.66
LRRC28-207ENST00000558500 TMEM235A6NFC5 223 aa4.68□□□□□ -1.66
LRRC28-207ENST00000558500 IFITM5A6NNB3 132 aa4.68□□□□□ -1.66
LRRC28-207ENST00000558500 F5H768 121 aa4.68□□□□□ -1.66
LRRC28-207ENST00000558500 F2RP25116 425 aa4.68□□□□□ -1.66
LRRC28-207ENST00000558500 PSMA1P25786 263 aaKnown RBP4.68□□□□□ -1.66
LRRC28-207ENST00000558500 G6PCP35575 357 aa4.68□□□□□ -1.66
LRRC28-207ENST00000558500 NKX2-1P43699 371 aaPredicted RBP4.68□□□□□ -1.66
LRRC28-207ENST00000558500 OR10A3P58181 314 aa4.68□□□□□ -1.66
LRRC28-207ENST00000558500 FXYD4P59646 89 aa4.68□□□□□ -1.66
LRRC28-207ENST00000558500 GNG2P59768 71 aa4.68□□□□□ -1.66
LRRC28-207ENST00000558500 CLINT1Q14677 625 aa4.68□□□□□ -1.66
LRRC28-207ENST00000558500 ICAM4Q14773 271 aa4.68□□□□□ -1.66
LRRC28-207ENST00000558500 TRAM1Q15629 374 aa4.68□□□□□ -1.66
LRRC28-207ENST00000558500 USF2Q15853 346 aaPredicted RBP4.68□□□□□ -1.66
LRRC28-207ENST00000558500 RRN3P1Q2M238 152 aa4.68□□□□□ -1.66
LRRC28-207ENST00000558500 GDF5OSQ5U4N7 250 aa4.68□□□□□ -1.66
LRRC28-207ENST00000558500 C16orf54Q6UWD8 224 aa4.68□□□□□ -1.66
LRRC28-207ENST00000558500 ZNF709Q8N972 641 aa4.68□□□□□ -1.66
LRRC28-207ENST00000558500 SYT8Q8NBV8 401 aa4.68□□□□□ -1.66
LRRC28-207ENST00000558500 BEST4Q8NFU0 473 aa4.68□□□□□ -1.66
LRRC28-207ENST00000558500 FCAMRQ8WWV6 532 aa4.68□□□□□ -1.66
LRRC28-207ENST00000558500 TMEM230Q96A57 120 aa4.68□□□□□ -1.66
LRRC28-207ENST00000558500 SLC45A2Q9UMX9 530 aa4.68□□□□□ -1.66
LRRC28-207ENST00000558500 GOLT1BQ9Y3E0 138 aa4.68□□□□□ -1.66
LRRC28-207ENST00000558500 LYRM9A8MSI8 78 aa4.67□□□□□ -1.66
LRRC28-207ENST00000558500 PDCD5O14737 125 aa4.67□□□□□ -1.66
LRRC28-207ENST00000558500 CLN5O75503 358 aa4.67□□□□□ -1.66
LRRC28-207ENST00000558500 ATP5HO75947 161 aa4.67□□□□□ -1.66
LRRC28-207ENST00000558500 IFNA5P01569 189 aa4.67□□□□□ -1.66
LRRC28-207ENST00000558500 RLN1P04808 185 aa4.67□□□□□ -1.66
LRRC28-207ENST00000558500 DEFB130BP0DP73 79 aa4.67□□□□□ -1.66
LRRC28-207ENST00000558500 DEFB130AP0DP74 79 aa4.67□□□□□ -1.66
LRRC28-207ENST00000558500 DEFB1P60022 68 aa4.67□□□□□ -1.66
LRRC28-207ENST00000558500 ERHP84090 104 aaKnown RBP4.67□□□□□ -1.66
LRRC28-207ENST00000558500 PRCDQ00LT1 54 aa4.67□□□□□ -1.66
LRRC28-207ENST00000558500 FABP5Q01469 135 aa4.67□□□□□ -1.66
LRRC28-207ENST00000558500 Q6ZRN7 208 aaPredicted RBP4.67□□□□□ -1.66
LRRC28-207ENST00000558500 TMEM17Q86X19 198 aa4.67□□□□□ -1.66
LRRC28-207ENST00000558500 LGALS14Q8TCE9 139 aa4.67□□□□□ -1.66
LRRC28-207ENST00000558500 C7orf50Q9BRJ6 194 aaKnown RBP4.67□□□□□ -1.66
LRRC28-207ENST00000558500 UPK3BQ9BT76 320 aa4.67□□□□□ -1.66
LRRC28-207ENST00000558500 SLC35B3Q9H1N7 401 aa4.67□□□□□ -1.66
LRRC28-207ENST00000558500 SAV1Q9H4B6 383 aaPredicted RBP4.67□□□□□ -1.66
LRRC28-207ENST00000558500 NRN1Q9NPD7 142 aa4.67□□□□□ -1.66
LRRC28-207ENST00000558500 RNF213Q63HN8 5207 aa4.66□□□□□ -1.66
LRRC28-207ENST00000558500 TRAV1-2A0A0B4J238 106 aa4.66□□□□□ -1.66
LRRC28-207ENST00000558500 C9orf118A6NHY6 69 aa4.66□□□□□ -1.66
LRRC28-207ENST00000558500 B5MCH6 92 aa4.66□□□□□ -1.66
LRRC28-207ENST00000558500 CASQ2O14958 399 aaPredicted RBP4.66□□□□□ -1.66
LRRC28-207ENST00000558500 SCGB2A1O75556 95 aa4.66□□□□□ -1.66
LRRC28-207ENST00000558500 PGLYRP1O75594 196 aaPredicted RBP4.66□□□□□ -1.66
LRRC28-207ENST00000558500 TNFRSF6BO95407 300 aa4.66□□□□□ -1.66
LRRC28-207ENST00000558500 IGKV1-17P01599 117 aa4.66□□□□□ -1.66
LRRC28-207ENST00000558500 ATP5G1P05496 136 aa4.66□□□□□ -1.66
LRRC28-207ENST00000558500 HNRNPCP07910 306 aaKnown RBP eCLIP4.66□□□□□ -1.66
LRRC28-207ENST00000558500 GNAO1P09471 354 aa4.66□□□□□ -1.66
LRRC28-207ENST00000558500 HSMCR30P0CW71 290 aa4.66□□□□□ -1.66
LRRC28-207ENST00000558500 ATP5G3P48201 142 aa4.66□□□□□ -1.66
LRRC28-207ENST00000558500 PTTG1IPP53801 180 aa4.66□□□□□ -1.66
LRRC28-207ENST00000558500 LINC00315P59091 139 aa4.66□□□□□ -1.66
LRRC28-207ENST00000558500 ERVFC1-1P60608 527 aa4.66□□□□□ -1.66
LRRC28-207ENST00000558500 HSPE1P61604 102 aaKnown RBP4.66□□□□□ -1.66
LRRC28-207ENST00000558500 ZNF79Q15937 498 aa4.66□□□□□ -1.66
LRRC28-207ENST00000558500 TIGITQ495A1 244 aa4.66□□□□□ -1.66
LRRC28-207ENST00000558500 FOXI2Q6ZQN5 318 aa4.66□□□□□ -1.66
LRRC28-207ENST00000558500 HOGA1Q86XE5 327 aa4.66□□□□□ -1.66
LRRC28-207ENST00000558500 C10orf67Q8IYJ2 551 aa4.66□□□□□ -1.66
LRRC28-207ENST00000558500 C8orf59Q8N0T1 100 aaPredicted RBP4.66□□□□□ -1.66
LRRC28-207ENST00000558500 DHRSXQ8N5I4 330 aa4.66□□□□□ -1.66
LRRC28-207ENST00000558500 TSPAN14Q8NG11 270 aa4.66□□□□□ -1.66
LRRC28-207ENST00000558500 OR4B1Q8NGF8 309 aa4.66□□□□□ -1.66
LRRC28-207ENST00000558500 OR4X1Q8NH49 305 aa4.66□□□□□ -1.66
LRRC28-207ENST00000558500 BORCS5Q969J3 196 aa4.66□□□□□ -1.66
LRRC28-207ENST00000558500 UHRF2Q96PU4 802 aa4.66□□□□□ -1.66
LRRC28-207ENST00000558500 CCDC90BQ9GZT6 254 aa4.66□□□□□ -1.66
LRRC28-207ENST00000558500 S100A14Q9HCY8 104 aa4.66□□□□□ -1.66
LRRC28-207ENST00000558500 ACOT13Q9NPJ3 140 aa4.66□□□□□ -1.66
LRRC28-207ENST00000558500 ZNF586Q9NXT0 402 aa4.66□□□□□ -1.66
LRRC28-207ENST00000558500 MRPL36Q9P0J6 103 aaKnown RBP4.66□□□□□ -1.66
LRRC28-207ENST00000558500 CBY3A6NI87 242 aa4.65□□□□□ -1.67
LRRC28-207ENST00000558500 PTGES3LE9PB15 166 aa4.65□□□□□ -1.67
LRRC28-207ENST00000558500 BUB3O43684 328 aa4.65□□□□□ -1.67
LRRC28-207ENST00000558500 SCGNO76038 276 aa4.65□□□□□ -1.67
LRRC28-207ENST00000558500 SNCAP37840 140 aa4.65□□□□□ -1.67
LRRC28-207ENST00000558500 HAMPP81172 84 aa4.65□□□□□ -1.67
LRRC28-207ENST00000558500 PSG9Q00887 426 aa4.65□□□□□ -1.67
LRRC28-207ENST00000558500 TMEM69Q5SWH9 247 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms