RNA–Protein interactions for RNA: ENST00000558155.1

SPG11-208, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-208ENST00000558155 SCGNO76038 276 aa3.67□□□□□ -1.82
SPG11-208ENST00000558155 TMEM50AO95807 157 aa3.67□□□□□ -1.82
SPG11-208ENST00000558155 PPYP01298 95 aa3.67□□□□□ -1.82
SPG11-208ENST00000558155 IGHV3-48P01763 117 aa3.67□□□□□ -1.82
SPG11-208ENST00000558155 RAB4AP20338 218 aa3.67□□□□□ -1.82
SPG11-208ENST00000558155 F2RP25116 425 aa3.67□□□□□ -1.82
SPG11-208ENST00000558155 LPAR6P43657 344 aa3.67□□□□□ -1.82
SPG11-208ENST00000558155 P2RY1P47900 373 aa3.67□□□□□ -1.82
SPG11-208ENST00000558155 CCL18P55774 89 aa3.67□□□□□ -1.82
SPG11-208ENST00000558155 FXYD4P59646 89 aa3.67□□□□□ -1.82
SPG11-208ENST00000558155 RAB4BP61018 213 aa3.67□□□□□ -1.82
SPG11-208ENST00000558155 SNRPD3P62318 126 aaKnown RBP3.67□□□□□ -1.82
SPG11-208ENST00000558155 RPS25P62851 125 aaKnown RBP3.67□□□□□ -1.82
SPG11-208ENST00000558155 DHRS2Q13268 280 aa3.67□□□□□ -1.82
SPG11-208ENST00000558155 PSMG4Q5JS54 123 aa3.67□□□□□ -1.82
SPG11-208ENST00000558155 FAM222AQ5U5X8 452 aa3.67□□□□□ -1.82
SPG11-208ENST00000558155 LAIR2Q6ISS4 152 aa3.67□□□□□ -1.82
SPG11-208ENST00000558155 TMEM88Q6PEY1 159 aa3.67□□□□□ -1.82
SPG11-208ENST00000558155 ZNF705AQ6ZN79 300 aaPredicted RBP3.67□□□□□ -1.82
SPG11-208ENST00000558155 CROCCP3Q8IVE0 287 aa3.67□□□□□ -1.82
SPG11-208ENST00000558155 PACRGLQ8N7B6 248 aa3.67□□□□□ -1.82
SPG11-208ENST00000558155 BEST4Q8NFU0 473 aa3.67□□□□□ -1.82
SPG11-208ENST00000558155 OR13F1Q8NGS4 319 aa3.67□□□□□ -1.82
SPG11-208ENST00000558155 OR51H1Q8NH63 302 aa3.67□□□□□ -1.82
SPG11-208ENST00000558155 OR4A16Q8NH70 328 aa3.67□□□□□ -1.82
SPG11-208ENST00000558155 DCANP1Q8TF63 244 aa3.67□□□□□ -1.82
SPG11-208ENST00000558155 NUDCD2Q8WVJ2 157 aa3.67□□□□□ -1.82
SPG11-208ENST00000558155 TMEM230Q96A57 120 aa3.67□□□□□ -1.82
SPG11-208ENST00000558155 SPXQ9BT56 116 aa3.67□□□□□ -1.82
SPG11-208ENST00000558155 SEPSECSQ9HD40 501 aaKnown RBP3.67□□□□□ -1.82
SPG11-208ENST00000558155 SCN3BQ9NY72 215 aa3.67□□□□□ -1.82
SPG11-208ENST00000558155 NSG2Q9Y328 171 aa3.67□□□□□ -1.82
SPG11-208ENST00000558155 LSM2Q9Y333 95 aaKnown RBP3.67□□□□□ -1.82
SPG11-208ENST00000558155 DNAH17Q9UFH2 4485 aa3.67□□□□□ -1.82
SPG11-208ENST00000558155 DNAH11Q96DT5 4516 aa3.67□□□□□ -1.82
SPG11-208ENST00000558155 IGHV3OR16-12A0A075B7B8 117 aa3.66□□□□□ -1.82
SPG11-208ENST00000558155 LOC100506127A0A0U1RQW1 187 aa3.66□□□□□ -1.82
SPG11-208ENST00000558155 A0A1B0GU03 582 aa3.66□□□□□ -1.82
SPG11-208ENST00000558155 TMEM235A6NFC5 223 aa3.66□□□□□ -1.82
SPG11-208ENST00000558155 H3BMM0 161 aa3.66□□□□□ -1.82
SPG11-208ENST00000558155 RAB3BP20337 219 aa3.66□□□□□ -1.82
SPG11-208ENST00000558155 MYL9P24844 172 aa3.66□□□□□ -1.82
SPG11-208ENST00000558155 CRYBB3P26998 211 aa3.66□□□□□ -1.82
SPG11-208ENST00000558155 GNRHRP30968 328 aa3.66□□□□□ -1.82
SPG11-208ENST00000558155 G6PCP35575 357 aa3.66□□□□□ -1.82
SPG11-208ENST00000558155 SNCAP37840 140 aa3.66□□□□□ -1.82
SPG11-208ENST00000558155 SUB1P53999 127 aaKnown RBP eCLIP3.66□□□□□ -1.82
SPG11-208ENST00000558155 OR10A3P58181 314 aa3.66□□□□□ -1.82
SPG11-208ENST00000558155 DAD1P61803 113 aa3.66□□□□□ -1.82
SPG11-208ENST00000558155 FABP5Q01469 135 aa3.66□□□□□ -1.82
SPG11-208ENST00000558155 ODF1Q14990 250 aa3.66□□□□□ -1.82
SPG11-208ENST00000558155 SAPCD1Q5SSQ6 148 aa3.66□□□□□ -1.82
SPG11-208ENST00000558155 OGFRL1Q5TC84 451 aaPredicted RBP3.66□□□□□ -1.82
SPG11-208ENST00000558155 ZNF818PQ6ZRF7 136 aa3.66□□□□□ -1.82
SPG11-208ENST00000558155 ZNF114Q8NC26 417 aa3.66□□□□□ -1.82
SPG11-208ENST00000558155 ZNF680Q8NEM1 530 aa3.66□□□□□ -1.82
SPG11-208ENST00000558155 ZNRF2Q8NHG8 242 aa3.66□□□□□ -1.82
SPG11-208ENST00000558155 FCAMRQ8WWV6 532 aa3.66□□□□□ -1.82
SPG11-208ENST00000558155 FRZBQ92765 325 aa3.66□□□□□ -1.82
SPG11-208ENST00000558155 PTTG2Q9NZH5 202 aa3.66□□□□□ -1.82
SPG11-208ENST00000558155 DAPK2Q9UIK4 370 aa3.66□□□□□ -1.82
SPG11-208ENST00000558155 TPRKBQ9Y3C4 175 aa3.66□□□□□ -1.82
SPG11-208ENST00000558155 FAT2Q9NYQ8 4349 aa3.65□□□□□ -1.82
SPG11-208ENST00000558155 DNAH2Q9P225 4427 aa3.65□□□□□ -1.83
SPG11-208ENST00000558155 TRAV30A0A087WSZ9 112 aa3.65□□□□□ -1.83
SPG11-208ENST00000558155 RPS10-NUDT3A0A1W2PQS6 291 aa3.65□□□□□ -1.83
SPG11-208ENST00000558155 ZNF705FA8MVS1 300 aaPredicted RBP3.65□□□□□ -1.83
SPG11-208ENST00000558155 CORTO00230 105 aa3.65□□□□□ -1.83
SPG11-208ENST00000558155 PGLYRP1O75594 196 aaPredicted RBP3.65□□□□□ -1.83
SPG11-208ENST00000558155 NUDT3O95989 172 aa3.65□□□□□ -1.83
SPG11-208ENST00000558155 HBE1P02100 147 aa3.65□□□□□ -1.83
SPG11-208ENST00000558155 GNAO1P09471 354 aa3.65□□□□□ -1.83
SPG11-208ENST00000558155 ZNF705DP0CH99 300 aaPredicted RBP3.65□□□□□ -1.83
SPG11-208ENST00000558155 ZNF705BP0CI00 300 aaPredicted RBP3.65□□□□□ -1.83
SPG11-208ENST00000558155 PTHLHP12272 177 aa3.65□□□□□ -1.83
SPG11-208ENST00000558155 HLA-DRB4P13762 266 aa3.65□□□□□ -1.83
SPG11-208ENST00000558155 PPP5CP53041 499 aa3.65□□□□□ -1.83
SPG11-208ENST00000558155 HERV-K104P61576 105 aa3.65□□□□□ -1.83
SPG11-208ENST00000558155 HSPE1P61604 102 aaKnown RBP3.65□□□□□ -1.83
SPG11-208ENST00000558155 PRCDQ00LT1 54 aa3.65□□□□□ -1.83
SPG11-208ENST00000558155 MLLT11Q13015 90 aaPredicted RBP3.65□□□□□ -1.83
SPG11-208ENST00000558155 RRN3P1Q2M238 152 aa3.65□□□□□ -1.83
SPG11-208ENST00000558155 H2BFWTQ7Z2G1 175 aa3.65□□□□□ -1.83
SPG11-208ENST00000558155 TMEM17Q86X19 198 aa3.65□□□□□ -1.83
SPG11-208ENST00000558155 HOGA1Q86XE5 327 aa3.65□□□□□ -1.83
SPG11-208ENST00000558155 CMTM1Q8IZ96 169 aa3.65□□□□□ -1.83
SPG11-208ENST00000558155 LYPD1Q8N2G4 141 aa3.65□□□□□ -1.83
SPG11-208ENST00000558155 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.65□□□□□ -1.83
SPG11-208ENST00000558155 LGALS14Q8TCE9 139 aa3.65□□□□□ -1.83
SPG11-208ENST00000558155 Q8WTZ3 238 aa3.65□□□□□ -1.83
SPG11-208ENST00000558155 MGLLQ99685 303 aa3.65□□□□□ -1.83
SPG11-208ENST00000558155 C7orf50Q9BRJ6 194 aaKnown RBP3.65□□□□□ -1.83
SPG11-208ENST00000558155 Q9H8V8 135 aa3.65□□□□□ -1.83
SPG11-208ENST00000558155 GOLT1BQ9Y3E0 138 aa3.65□□□□□ -1.83
SPG11-208ENST00000558155 YTHDF2Q9Y5A9 579 aaKnown RBP3.65□□□□□ -1.83
SPG11-208ENST00000558155 U3KQE9 123 aa3.65□□□□□ -1.83
SPG11-208ENST00000558155 HLA-DRB4X5D2U9 266 aa3.65□□□□□ -1.83
SPG11-208ENST00000558155 PKHD1P08F94 4074 aa3.65□□□□□ -1.83
SPG11-208ENST00000558155 PKD1P98161 4303 aa3.64□□□□□ -1.83
SPG11-208ENST00000558155 TRAV18A0A075B6X5 111 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms