RNA–Protein interactions for RNA: ENST00000551391.1

SCAF11-215, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 3

Gene SCAF11, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-215ENST00000551391 CCDC42Q96M95 316 aa0.58□□□□□ -2.32
SCAF11-215ENST00000551391 CCDC90BQ9GZT6 254 aa0.58□□□□□ -2.32
SCAF11-215ENST00000551391 RASL12Q9NYN1 266 aa0.58□□□□□ -2.32
SCAF11-215ENST00000551391 CYSLTR1Q9Y271 337 aa0.58□□□□□ -2.32
SCAF11-215ENST00000551391 SLC35A3Q9Y2D2 325 aa0.58□□□□□ -2.32
SCAF11-215ENST00000551391 ECM29Q5VYK3 1845 aa0.58□□□□□ -2.32
SCAF11-215ENST00000551391 MED1Q15648 1581 aaPredicted RBP0.57□□□□□ -2.32
SCAF11-215ENST00000551391 PLB1Q6P1J6 1458 aa0.57□□□□□ -2.32
SCAF11-215ENST00000551391 ZNF682O95780 498 aa0.57□□□□□ -2.32
SCAF11-215ENST00000551391 OR4E1P0C645 316 aa0.57□□□□□ -2.32
SCAF11-215ENST00000551391 CEBPGP53567 150 aa0.57□□□□□ -2.32
SCAF11-215ENST00000551391 CNBPP62633 177 aaKnown RBP0.57□□□□□ -2.32
SCAF11-215ENST00000551391 TRAPPC5Q8IUR0 188 aa0.57□□□□□ -2.32
SCAF11-215ENST00000551391 C3orf56Q8N813 242 aa0.57□□□□□ -2.32
SCAF11-215ENST00000551391 GDPD1Q8N9F7 314 aa0.57□□□□□ -2.32
SCAF11-215ENST00000551391 CT55Q8WUE5 264 aa0.57□□□□□ -2.32
SCAF11-215ENST00000551391 C4orf3Q8WVX3 66 aa0.57□□□□□ -2.32
SCAF11-215ENST00000551391 ACER3Q9NUN7 267 aa0.57□□□□□ -2.32
SCAF11-215ENST00000551391 LAMA4Q16363 1823 aa0.57□□□□□ -2.32
SCAF11-215ENST00000551391 PIK3C2GO75747 1445 aa0.56□□□□□ -2.32
SCAF11-215ENST00000551391 EML6Q6ZMW3 1958 aa0.56□□□□□ -2.32
SCAF11-215ENST00000551391 A0A087WUJ7 227 aa0.56□□□□□ -2.32
SCAF11-215ENST00000551391 A0A087X0T9 212 aa0.56□□□□□ -2.32
SCAF11-215ENST00000551391 hADV38S2A0JD32 116 aa0.56□□□□□ -2.32
SCAF11-215ENST00000551391 CASP1P29466 404 aa0.56□□□□□ -2.32
SCAF11-215ENST00000551391 DEFA1P59665 94 aa0.56□□□□□ -2.32
SCAF11-215ENST00000551391 EDDM3AQ14507 147 aa0.56□□□□□ -2.32
SCAF11-215ENST00000551391 TSNQ15631 228 aaKnown RBP0.56□□□□□ -2.32
SCAF11-215ENST00000551391 RGS21Q2M5E4 152 aa0.56□□□□□ -2.32
SCAF11-215ENST00000551391 SOSTDC1Q6X4U4 206 aa0.56□□□□□ -2.32
SCAF11-215ENST00000551391 OR8J2Q8NGG1 315 aa0.56□□□□□ -2.32
SCAF11-215ENST00000551391 TEX47Q8TBZ9 253 aa0.56□□□□□ -2.32
SCAF11-215ENST00000551391 ITFG2Q969R8 447 aa0.56□□□□□ -2.32
SCAF11-215ENST00000551391 DENND4CQ5VZ89 1909 aa0.56□□□□□ -2.32
SCAF11-215ENST00000551391 ZNF736B4DX44 427 aaPredicted RBP0.55□□□□□ -2.32
SCAF11-215ENST00000551391 CLDN25C9JDP6 229 aa0.55□□□□□ -2.32
SCAF11-215ENST00000551391 J3QRK9 145 aa0.55□□□□□ -2.32
SCAF11-215ENST00000551391 RPP14O95059 124 aaKnown RBP0.55□□□□□ -2.32
SCAF11-215ENST00000551391 PPIBP23284 216 aaKnown RBP0.55□□□□□ -2.32
SCAF11-215ENST00000551391 AP3S2P59780 193 aa0.55□□□□□ -2.32
SCAF11-215ENST00000551391 RANP62826 216 aaKnown RBP0.55□□□□□ -2.32
SCAF11-215ENST00000551391 HIST1H3AP68431 136 aa0.55□□□□□ -2.32
SCAF11-215ENST00000551391 H3F3AP84243 136 aa0.55□□□□□ -2.32
SCAF11-215ENST00000551391 MPV17LQ2QL34 196 aa0.55□□□□□ -2.32
SCAF11-215ENST00000551391 DEFB113Q30KQ7 82 aa0.55□□□□□ -2.32
SCAF11-215ENST00000551391 OR51V1Q9H2C8 321 aa0.55□□□□□ -2.32
SCAF11-215ENST00000551391 CTNNBIP1Q9NSA3 81 aaPredicted RBP0.55□□□□□ -2.32
SCAF11-215ENST00000551391 V9GYY5 206 aaPredicted RBP0.55□□□□□ -2.32
SCAF11-215ENST00000551391 RTL1A6NKG5 1358 aa0.55□□□□□ -2.32
SCAF11-215ENST00000551391 PEAK1Q9H792 1746 aa0.55□□□□□ -2.32
SCAF11-215ENST00000551391 ZNF106Q9H2Y7 1883 aaKnown RBP0.54□□□□□ -2.32
SCAF11-215ENST00000551391 CEP192Q8TEP8 1941 aa0.54□□□□□ -2.32
SCAF11-215ENST00000551391 MCM3APO60318 1980 aa0.54□□□□□ -2.32
SCAF11-215ENST00000551391 RPS17P08708 135 aaKnown RBP0.54□□□□□ -2.32
SCAF11-215ENST00000551391 LSM6P62312 80 aaKnown RBP0.54□□□□□ -2.32
SCAF11-215ENST00000551391 ESRGQ1W209 222 aa0.54□□□□□ -2.32
SCAF11-215ENST00000551391 BRMS1LQ5PSV4 323 aa0.54□□□□□ -2.32
SCAF11-215ENST00000551391 LCA10Q71F78 164 aa0.54□□□□□ -2.32
SCAF11-215ENST00000551391 ADAT3Q96EY9 351 aaPredicted RBP0.54□□□□□ -2.32
SCAF11-215ENST00000551391 AMELYQ99218 206 aa0.54□□□□□ -2.32
SCAF11-215ENST00000551391 HIST1H2BLQ99880 126 aa0.54□□□□□ -2.32
SCAF11-215ENST00000551391 TRIM4Q9C037 500 aa0.54□□□□□ -2.32
SCAF11-215ENST00000551391 C14orf132Q9NPU4 83 aa0.54□□□□□ -2.32
SCAF11-215ENST00000551391 TNRC6AQ8NDV7 1962 aaKnown RBP0.54□□□□□ -2.32
SCAF11-215ENST00000551391 hCG_1818297A0A087WSY0 165 aa0.53□□□□□ -2.32
SCAF11-215ENST00000551391 TRAV3A0A0B4J244 114 aa0.53□□□□□ -2.32
SCAF11-215ENST00000551391 SMIM9A6NGZ8 99 aa0.53□□□□□ -2.32
SCAF11-215ENST00000551391 A8MT66 165 aa0.53□□□□□ -2.32
SCAF11-215ENST00000551391 LYPLA2O95372 231 aa0.53□□□□□ -2.32
SCAF11-215ENST00000551391 HAND1O96004 215 aa0.53□□□□□ -2.32
SCAF11-215ENST00000551391 TCRBP04435 133 aa0.53□□□□□ -2.32
SCAF11-215ENST00000551391 SERPINE1P05121 402 aa0.53□□□□□ -2.32
SCAF11-215ENST00000551391 C8GP07360 202 aa0.53□□□□□ -2.32
SCAF11-215ENST00000551391 ANP32AP39687 249 aaKnown RBP0.53□□□□□ -2.32
SCAF11-215ENST00000551391 AESQ08117 197 aa0.53□□□□□ -2.32
SCAF11-215ENST00000551391 TMEM97Q5BJF2 176 aa0.53□□□□□ -2.32
SCAF11-215ENST00000551391 Q6Q795 121 aa0.53□□□□□ -2.32
SCAF11-215ENST00000551391 KRTAP19-3Q7Z4W3 81 aa0.53□□□□□ -2.32
SCAF11-215ENST00000551391 LINC00301Q8NCQ3 95 aa0.53□□□□□ -2.32
SCAF11-215ENST00000551391 OR8D4Q8NGM9 314 aa0.53□□□□□ -2.32
SCAF11-215ENST00000551391 WFDC5Q8TCV5 224 aa0.53□□□□□ -2.32
SCAF11-215ENST00000551391 TMEM133Q9H2Q1 129 aa0.53□□□□□ -2.32
SCAF11-215ENST00000551391 CDC42SE1Q9NRR8 79 aa0.53□□□□□ -2.32
SCAF11-215ENST00000551391 TVP23BQ9NYZ1 205 aa0.53□□□□□ -2.32
SCAF11-215ENST00000551391 AHNAKQ09666 5890 aaKnown RBP0.53□□□□□ -2.32
SCAF11-215ENST00000551391 MYO3BQ8WXR4 1341 aa0.53□□□□□ -2.32
SCAF11-215ENST00000551391 TAF1LQ8IZX4 1826 aa0.52□□□□□ -2.33
SCAF11-215ENST00000551391 TEX261Q6UWH6 196 aa0.52□□□□□ -2.33
SCAF11-215ENST00000551391 Q8N6K4 173 aa0.52□□□□□ -2.33
SCAF11-215ENST00000551391 OR52L1Q8NGH7 329 aa0.52□□□□□ -2.33
SCAF11-215ENST00000551391 OR2T10Q8NGZ9 312 aa0.52□□□□□ -2.33
SCAF11-215ENST00000551391 C14orf105Q9NVL8 296 aa0.52□□□□□ -2.33
SCAF11-215ENST00000551391 UBAP1Q9NZ09 502 aa0.52□□□□□ -2.33
SCAF11-215ENST00000551391 IDI2-AS1Q9NZ38 188 aa0.52□□□□□ -2.33
SCAF11-215ENST00000551391 U3KQ87 197 aa0.52□□□□□ -2.33
SCAF11-215ENST00000551391 COL1A1P02452 1464 aaPredicted RBP0.52□□□□□ -2.33
SCAF11-215ENST00000551391 PLXND1Q9Y4D7 1925 aa0.52□□□□□ -2.33
SCAF11-215ENST00000551391 CCDC160A6NGH7 325 aa0.51□□□□□ -2.33
SCAF11-215ENST00000551391 RIMBP3CA6NJZ7 1639 aa0.51□□□□□ -2.33
SCAF11-215ENST00000551391 RIMBP3BA6NNM3 1639 aa0.51□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms