RNA–Protein interactions for RNA: ENST00000549580.1

SNRPF-202, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 757 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-202ENST00000549580 ZNF106Q9H2Y7 1883 aaKnown RBP1.77□□□□□ -2.13
SNRPF-202ENST00000549580 CST8O60676 142 aa1.77□□□□□ -2.13
SNRPF-202ENST00000549580 PMP2P02689 132 aa1.77□□□□□ -2.13
SNRPF-202ENST00000549580 COX6A1P12074 109 aa1.77□□□□□ -2.13
SNRPF-202ENST00000549580 SNCBQ16143 134 aa1.77□□□□□ -2.13
SNRPF-202ENST00000549580 TMEM155Q4W5P6 130 aa1.77□□□□□ -2.13
SNRPF-202ENST00000549580 LCN15Q6UWW0 184 aa1.77□□□□□ -2.13
SNRPF-202ENST00000549580 DEFB128Q7Z7B8 93 aa1.77□□□□□ -2.13
SNRPF-202ENST00000549580 OR4E2Q8NGC2 313 aa1.77□□□□□ -2.13
SNRPF-202ENST00000549580 MALSU1Q96EH3 234 aa1.77□□□□□ -2.13
SNRPF-202ENST00000549580 HIST1H2BLQ99880 126 aa1.77□□□□□ -2.13
SNRPF-202ENST00000549580 EPDR1Q9UM22 224 aa1.77□□□□□ -2.13
SNRPF-202ENST00000549580 PLXNA3P51805 1871 aa1.77□□□□□ -2.13
SNRPF-202ENST00000549580 CCDC88AQ3V6T2 1871 aa1.77□□□□□ -2.13
SNRPF-202ENST00000549580 ECM29Q5VYK3 1845 aa1.77□□□□□ -2.13
SNRPF-202ENST00000549580 SYNMO15061 1565 aa1.76□□□□□ -2.13
SNRPF-202ENST00000549580 VWDEQ8N2E2 1590 aa1.76□□□□□ -2.13
SNRPF-202ENST00000549580 MPDZO75970 2070 aa1.76□□□□□ -2.13
SNRPF-202ENST00000549580 PXDNLA1KZ92 1463 aa1.76□□□□□ -2.13
SNRPF-202ENST00000549580 RIC1Q4ADV7 1423 aa1.76□□□□□ -2.13
SNRPF-202ENST00000549580 KIF24Q5T7B8 1368 aa1.76□□□□□ -2.13
SNRPF-202ENST00000549580 TONSLQ96HA7 1378 aa1.76□□□□□ -2.13
SNRPF-202ENST00000549580 PLXND1Q9Y4D7 1925 aa1.76□□□□□ -2.13
SNRPF-202ENST00000549580 A0A1B0GV72 72 aa1.76□□□□□ -2.13
SNRPF-202ENST00000549580 DUXBA0A1W2PPF3 345 aa1.76□□□□□ -2.13
SNRPF-202ENST00000549580 MFSD11O43934 449 aa1.76□□□□□ -2.13
SNRPF-202ENST00000549580 APOA2P02652 100 aa1.76□□□□□ -2.13
SNRPF-202ENST00000549580 C1QCP02747 245 aa1.76□□□□□ -2.13
SNRPF-202ENST00000549580 ZNF345Q14585 488 aa1.76□□□□□ -2.13
SNRPF-202ENST00000549580 BCL2L15Q5TBC7 163 aa1.76□□□□□ -2.13
SNRPF-202ENST00000549580 RNASE11Q8TAA1 199 aaKnown RBP1.76□□□□□ -2.13
SNRPF-202ENST00000549580 WFDC5Q8TCV5 224 aa1.76□□□□□ -2.13
SNRPF-202ENST00000549580 SPACA4Q8TDM5 124 aa1.76□□□□□ -2.13
SNRPF-202ENST00000549580 LYSMD1Q96S90 227 aa1.76□□□□□ -2.13
SNRPF-202ENST00000549580 HSPB9Q9BQS6 159 aa1.76□□□□□ -2.13
SNRPF-202ENST00000549580 PBOV1Q9GZY1 135 aa1.76□□□□□ -2.13
SNRPF-202ENST00000549580 TMEM133Q9H2Q1 129 aa1.76□□□□□ -2.13
SNRPF-202ENST00000549580 MIXL1Q9H2W2 232 aa1.76□□□□□ -2.13
SNRPF-202ENST00000549580 CST9LQ9H4G1 147 aa1.76□□□□□ -2.13
SNRPF-202ENST00000549580 MRPL40Q9NQ50 206 aaKnown RBP1.76□□□□□ -2.13
SNRPF-202ENST00000549580 STRCP1A6NGW2 1772 aa1.76□□□□□ -2.13
SNRPF-202ENST00000549580 HEATR5AQ86XA9 2040 aa1.76□□□□□ -2.13
SNRPF-202ENST00000549580 PTPRBP23467 1997 aa1.76□□□□□ -2.13
SNRPF-202ENST00000549580 MEIKINA0A087WXM9 373 aa1.75□□□□□ -2.13
SNRPF-202ENST00000549580 C7orf71A4D174 169 aa1.75□□□□□ -2.13
SNRPF-202ENST00000549580 TMEM212A6NML5 194 aa1.75□□□□□ -2.13
SNRPF-202ENST00000549580 RIIAD1A6NNX1 92 aa1.75□□□□□ -2.13
SNRPF-202ENST00000549580 TAX1BP3O14907 124 aa1.75□□□□□ -2.13
SNRPF-202ENST00000549580 CLPSP04118 112 aa1.75□□□□□ -2.13
SNRPF-202ENST00000549580 CRYGAP11844 174 aa1.75□□□□□ -2.13
SNRPF-202ENST00000549580 Q6ZQT0 140 aa1.75□□□□□ -2.13
SNRPF-202ENST00000549580 C7orf65Q6ZTY9 151 aa1.75□□□□□ -2.13
SNRPF-202ENST00000549580 EXOC3-AS1Q8N2X6 119 aa1.75□□□□□ -2.13
SNRPF-202ENST00000549580 LINC00471Q8N535 108 aa1.75□□□□□ -2.13
SNRPF-202ENST00000549580 OR4D11Q8NGI4 311 aa1.75□□□□□ -2.13
SNRPF-202ENST00000549580 SLAMF6Q96DU3 332 aa1.75□□□□□ -2.13
SNRPF-202ENST00000549580 ADAT3Q96EY9 351 aaPredicted RBP1.75□□□□□ -2.13
SNRPF-202ENST00000549580 YPEL2Q96QA6 119 aa1.75□□□□□ -2.13
SNRPF-202ENST00000549580 NHP2Q9NX24 153 aaKnown RBP1.75□□□□□ -2.13
SNRPF-202ENST00000549580 SMPXQ9UHP9 88 aa1.75□□□□□ -2.13
SNRPF-202ENST00000549580 KIAA2026Q5HYC2 2103 aa1.75□□□□□ -2.13
SNRPF-202ENST00000549580 YTHDC2Q9H6S0 1430 aaKnown RBP1.74□□□□□ -2.13
SNRPF-202ENST00000549580 BAHCC1Q9P281 2608 aa1.74□□□□□ -2.13
SNRPF-202ENST00000549580 PBRM1Q86U86 1689 aa1.74□□□□□ -2.13
SNRPF-202ENST00000549580 NCKAP5O14513 1909 aa1.74□□□□□ -2.13
SNRPF-202ENST00000549580 MED1Q15648 1581 aaPredicted RBP1.74□□□□□ -2.13
SNRPF-202ENST00000549580 IGKV1-9A0A0C4DH69 117 aa1.74□□□□□ -2.13
SNRPF-202ENST00000549580 IBA57-AS1B1ANH7 110 aa1.74□□□□□ -2.13
SNRPF-202ENST00000549580 H0YJX3 145 aa1.74□□□□□ -2.13
SNRPF-202ENST00000549580 GPR31O00270 319 aa1.74□□□□□ -2.13
SNRPF-202ENST00000549580 PFDN1O60925 122 aa1.74□□□□□ -2.13
SNRPF-202ENST00000549580 ZNF737O75373 536 aa1.74□□□□□ -2.13
SNRPF-202ENST00000549580 CRHP06850 196 aa1.74□□□□□ -2.13
SNRPF-202ENST00000549580 DEFB103AP81534 67 aa1.74□□□□□ -2.13
SNRPF-202ENST00000549580 TFAMQ00059 246 aaKnown RBP1.74□□□□□ -2.13
SNRPF-202ENST00000549580 NNATQ16517 81 aa1.74□□□□□ -2.13
SNRPF-202ENST00000549580 FAM24BQ8N5W8 94 aa1.74□□□□□ -2.13
SNRPF-202ENST00000549580 OR13D1Q8NGV5 346 aa1.74□□□□□ -2.13
SNRPF-202ENST00000549580 STAG3L4Q8TBR4 150 aa1.74□□□□□ -2.13
SNRPF-202ENST00000549580 CANT1Q8WVQ1 401 aa1.74□□□□□ -2.13
SNRPF-202ENST00000549580 YIPF3Q9GZM5 350 aa1.74□□□□□ -2.13
SNRPF-202ENST00000549580 CUL9Q8IWT3 2517 aa1.73□□□□□ -2.13
SNRPF-202ENST00000549580 TRGV10A0A0A0MS01 117 aa1.73□□□□□ -2.13
SNRPF-202ENST00000549580 GGCTO75223 188 aaKnown RBP1.73□□□□□ -2.13
SNRPF-202ENST00000549580 IFNA21P01568 189 aa1.73□□□□□ -2.13
SNRPF-202ENST00000549580 UBBP0CG47 229 aa1.73□□□□□ -2.13
SNRPF-202ENST00000549580 GLRXP35754 106 aa1.73□□□□□ -2.13
SNRPF-202ENST00000549580 ELOBQ15370 118 aa1.73□□□□□ -2.13
SNRPF-202ENST00000549580 SPANXN5Q5MJ07 72 aa1.73□□□□□ -2.13
SNRPF-202ENST00000549580 DCUN1D2Q6PH85 259 aa1.73□□□□□ -2.13
SNRPF-202ENST00000549580 AQP3Q92482 292 aa1.73□□□□□ -2.13
SNRPF-202ENST00000549580 OR2J1Q9GZK6 312 aa1.73□□□□□ -2.13
SNRPF-202ENST00000549580 PCTPQ9UKL6 214 aa1.73□□□□□ -2.13
SNRPF-202ENST00000549580 SLC35A3Q9Y2D2 325 aa1.73□□□□□ -2.13
SNRPF-202ENST00000549580 LHFPL6Q9Y693 200 aa1.73□□□□□ -2.13
SNRPF-202ENST00000549580 UHRF1BP1Q6BDS2 1440 aa1.73□□□□□ -2.13
SNRPF-202ENST00000549580 DISP1Q96F81 1524 aa1.72□□□□□ -2.13
SNRPF-202ENST00000549580 FUOMA2VDF0 154 aa1.72□□□□□ -2.13
SNRPF-202ENST00000549580 MAP1LC3B2A6NCE7 125 aa1.72□□□□□ -2.13
SNRPF-202ENST00000549580 SHBGP04278 402 aa1.72□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms