RNA–Protein interactions for RNA: ENST00000548313.5

DEPDC4-205, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 389 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-205ENST00000548313 TMEM70Q9BUB7 260 aa0.52□□□□□ -2.33
DEPDC4-205ENST00000548313 CDC42SE1Q9NRR8 79 aa0.52□□□□□ -2.33
DEPDC4-205ENST00000548313 HECW1Q76N89 1606 aa0.52□□□□□ -2.33
DEPDC4-205ENST00000548313 TAF1LQ8IZX4 1826 aa0.52□□□□□ -2.33
DEPDC4-205ENST00000548313 SCN3AQ9NY46 2000 aa0.52□□□□□ -2.33
DEPDC4-205ENST00000548313 A0A1W2PPM0 123 aa0.51□□□□□ -2.33
DEPDC4-205ENST00000548313 E9PCH4 1651 aa0.51□□□□□ -2.33
DEPDC4-205ENST00000548313 OR4E1P0C645 316 aa0.51□□□□□ -2.33
DEPDC4-205ENST00000548313 MED1Q15648 1581 aaPredicted RBP0.51□□□□□ -2.33
DEPDC4-205ENST00000548313 TEX261Q6UWH6 196 aa0.51□□□□□ -2.33
DEPDC4-205ENST00000548313 CCDC90BQ9GZT6 254 aa0.51□□□□□ -2.33
DEPDC4-205ENST00000548313 ZNF106Q9H2Y7 1883 aaKnown RBP0.51□□□□□ -2.33
DEPDC4-205ENST00000548313 MUC5BQ9HC84 5762 aaPredicted RBP0.51□□□□□ -2.33
DEPDC4-205ENST00000548313 CYSLTR1Q9Y271 337 aa0.51□□□□□ -2.33
DEPDC4-205ENST00000548313 U3KQ87 197 aa0.51□□□□□ -2.33
DEPDC4-205ENST00000548313 ROBO3Q96MS0 1386 aa0.5□□□□□ -2.33
DEPDC4-205ENST00000548313 CCDC160A6NGH7 325 aa0.5□□□□□ -2.33
DEPDC4-205ENST00000548313 CLDN24A6NM45 220 aa0.5□□□□□ -2.33
DEPDC4-205ENST00000548313 ZNF25P17030 456 aaPredicted RBP0.5□□□□□ -2.33
DEPDC4-205ENST00000548313 DEFB113Q30KQ7 82 aa0.5□□□□□ -2.33
DEPDC4-205ENST00000548313 OR6V1Q8N148 313 aa0.5□□□□□ -2.33
DEPDC4-205ENST00000548313 CLDN22Q8N7P3 220 aa0.5□□□□□ -2.33
DEPDC4-205ENST00000548313 BORCS7Q96B45 105 aa0.5□□□□□ -2.33
DEPDC4-205ENST00000548313 CMSS1Q9BQ75 279 aaKnown RBP0.5□□□□□ -2.33
DEPDC4-205ENST00000548313 OR51V1Q9H2C8 321 aa0.5□□□□□ -2.33
DEPDC4-205ENST00000548313 V9GYY5 206 aaPredicted RBP0.5□□□□□ -2.33
DEPDC4-205ENST00000548313 ZFC3H1O60293 1989 aaKnown RBP0.5□□□□□ -2.33
DEPDC4-205ENST00000548313 PLXND1Q9Y4D7 1925 aa0.5□□□□□ -2.33
DEPDC4-205ENST00000548313 MYO3BQ8WXR4 1341 aa0.49□□□□□ -2.33
DEPDC4-205ENST00000548313 A0A087X0T9 212 aa0.49□□□□□ -2.33
DEPDC4-205ENST00000548313 NCR3O14931 201 aa0.49□□□□□ -2.33
DEPDC4-205ENST00000548313 CASP1P29466 404 aa0.49□□□□□ -2.33
DEPDC4-205ENST00000548313 OMPP47874 163 aa0.49□□□□□ -2.33
DEPDC4-205ENST00000548313 TSNQ15631 228 aaKnown RBP0.49□□□□□ -2.33
DEPDC4-205ENST00000548313 ESRGQ1W209 222 aa0.49□□□□□ -2.33
DEPDC4-205ENST00000548313 BRMS1LQ5PSV4 323 aa0.49□□□□□ -2.33
DEPDC4-205ENST00000548313 LINC00301Q8NCQ3 95 aa0.49□□□□□ -2.33
DEPDC4-205ENST00000548313 OR52R1Q8NGF1 315 aa0.49□□□□□ -2.33
DEPDC4-205ENST00000548313 C8orf76Q96K31 380 aa0.49□□□□□ -2.33
DEPDC4-205ENST00000548313 C2orf50Q96LR7 162 aa0.49□□□□□ -2.33
DEPDC4-205ENST00000548313 RNF122Q9H9V4 155 aa0.49□□□□□ -2.33
DEPDC4-205ENST00000548313 C14orf132Q9NPU4 83 aa0.49□□□□□ -2.33
DEPDC4-205ENST00000548313 NOSIPQ9Y314 301 aaKnown RBP0.49□□□□□ -2.33
DEPDC4-205ENST00000548313 COL1A1P02452 1464 aaPredicted RBP0.48□□□□□ -2.33
DEPDC4-205ENST00000548313 TRAV3A0A0B4J244 114 aa0.48□□□□□ -2.33
DEPDC4-205ENST00000548313 J3QRK9 145 aa0.48□□□□□ -2.33
DEPDC4-205ENST00000548313 SNRNP200O75643 2136 aaKnown RBP0.48□□□□□ -2.33
DEPDC4-205ENST00000548313 DEFA1P59665 94 aa0.48□□□□□ -2.33
DEPDC4-205ENST00000548313 AP3S2P59780 193 aa0.48□□□□□ -2.33
DEPDC4-205ENST00000548313 SRSF6Q13247 344 aaKnown RBP0.48□□□□□ -2.33
DEPDC4-205ENST00000548313 IAH1Q2TAA2 248 aaPredicted RBP0.48□□□□□ -2.33
DEPDC4-205ENST00000548313 LCA10Q71F78 164 aa0.48□□□□□ -2.33
DEPDC4-205ENST00000548313 C12orf45Q8N5I9 185 aaPredicted RBP0.48□□□□□ -2.33
DEPDC4-205ENST00000548313 CT55Q8WUE5 264 aa0.48□□□□□ -2.33
DEPDC4-205ENST00000548313 HIST1H2BLQ99880 126 aa0.48□□□□□ -2.33
DEPDC4-205ENST00000548313 DOCK3Q8IZD9 2030 aa0.47□□□□□ -2.33
DEPDC4-205ENST00000548313 FAM236DA0A1B0GTK5 79 aa0.47□□□□□ -2.33
DEPDC4-205ENST00000548313 FAM236CP0DP71 79 aa0.47□□□□□ -2.33
DEPDC4-205ENST00000548313 ANP32AP39687 249 aaKnown RBP0.47□□□□□ -2.33
DEPDC4-205ENST00000548313 PSG9Q00887 426 aa0.47□□□□□ -2.33
DEPDC4-205ENST00000548313 C12orf74Q32Q52 190 aa0.47□□□□□ -2.33
DEPDC4-205ENST00000548313 FAM74A1Q5RGS3 127 aa0.47□□□□□ -2.33
DEPDC4-205ENST00000548313 SPATA8Q6RVD6 105 aa0.47□□□□□ -2.33
DEPDC4-205ENST00000548313 GDPD1Q8N9F7 314 aa0.47□□□□□ -2.33
DEPDC4-205ENST00000548313 OR2T10Q8NGZ9 312 aa0.47□□□□□ -2.33
DEPDC4-205ENST00000548313 PATE1Q8WXA2 126 aa0.47□□□□□ -2.33
DEPDC4-205ENST00000548313 NCOA1Q15788 1441 aa0.47□□□□□ -2.33
DEPDC4-205ENST00000548313 CNIH1O95406 144 aa0.46□□□□□ -2.34
DEPDC4-205ENST00000548313 PPIBP23284 216 aaKnown RBP0.46□□□□□ -2.34
DEPDC4-205ENST00000548313 KRTAP21-1Q3LI58 79 aa0.46□□□□□ -2.34
DEPDC4-205ENST00000548313 PTRHD1Q6GMV3 140 aaKnown RBP0.46□□□□□ -2.34
DEPDC4-205ENST00000548313 CLECL1Q8IZS7 167 aa0.46□□□□□ -2.34
DEPDC4-205ENST00000548313 C6orf62Q9GZU0 229 aaPredicted RBP0.46□□□□□ -2.34
DEPDC4-205ENST00000548313 KIAA1549Q9HCM3 1950 aa0.45□□□□□ -2.34
DEPDC4-205ENST00000548313 hADV38S2A0JD32 116 aa0.45□□□□□ -2.34
DEPDC4-205ENST00000548313 KPNA3O00505 521 aaPredicted RBP0.45□□□□□ -2.34
DEPDC4-205ENST00000548313 CCL25O15444 150 aa0.45□□□□□ -2.34
DEPDC4-205ENST00000548313 ZNF682O95780 498 aa0.45□□□□□ -2.34
DEPDC4-205ENST00000548313 LINC00322Q6ZN03 302 aaPredicted RBP0.45□□□□□ -2.34
DEPDC4-205ENST00000548313 OR8D4Q8NGM9 314 aa0.45□□□□□ -2.34
DEPDC4-205ENST00000548313 ADAT3Q96EY9 351 aaPredicted RBP0.45□□□□□ -2.34
DEPDC4-205ENST00000548313 TNS3Q68CZ2 1445 aa0.45□□□□□ -2.34
DEPDC4-205ENST00000548313 SCN10AQ9Y5Y9 1956 aa0.45□□□□□ -2.34
DEPDC4-205ENST00000548313 RTL1A6NKG5 1358 aa0.45□□□□□ -2.34
DEPDC4-205ENST00000548313 TRBV6-4A0A1B0GX49 114 aa0.44□□□□□ -2.34
DEPDC4-205ENST00000548313 CCL16O15467 120 aa0.44□□□□□ -2.34
DEPDC4-205ENST00000548313 DNAL4O96015 105 aa0.44□□□□□ -2.34
DEPDC4-205ENST00000548313 DHFRP00374 187 aa0.44□□□□□ -2.34
DEPDC4-205ENST00000548313 EFNA4P52798 201 aa0.44□□□□□ -2.34
DEPDC4-205ENST00000548313 GKN2Q86XP6 184 aa0.44□□□□□ -2.34
DEPDC4-205ENST00000548313 TRAPPC5Q8IUR0 188 aa0.44□□□□□ -2.34
DEPDC4-205ENST00000548313 TMEM254Q8TBM7 123 aa0.44□□□□□ -2.34
DEPDC4-205ENST00000548313 WFDC5Q8TCV5 224 aa0.44□□□□□ -2.34
DEPDC4-205ENST00000548313 CCDC42Q96M95 316 aa0.44□□□□□ -2.34
DEPDC4-205ENST00000548313 BCL2L10Q9HD36 194 aa0.44□□□□□ -2.34
DEPDC4-205ENST00000548313 TVP23BQ9NYZ1 205 aa0.44□□□□□ -2.34
DEPDC4-205ENST00000548313 UBAP1Q9NZ09 502 aa0.44□□□□□ -2.34
DEPDC4-205ENST00000548313 UTP11Q9Y3A2 253 aaKnown RBP0.44□□□□□ -2.34
DEPDC4-205ENST00000548313 KDM6AO15550 1401 aaPredicted RBP0.44□□□□□ -2.34
DEPDC4-205ENST00000548313 MED12Q93074 2177 aa0.43□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms