RNA–Protein interactions for RNA: ENST00000539449.2

RTN4IP1-204, Transcript of reticulon 4 interacting protein 1, humanhuman

TSL 2 BASIC

Gene RTN4IP1, Length 814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1-204ENST00000539449 FAM181BA6NEQ2 426 aa7.13□□□□□ -1.27
RTN4IP1-204ENST00000539449 TEX46H3BTG2 121 aa7.13□□□□□ -1.27
RTN4IP1-204ENST00000539449 AP4M1O00189 453 aa7.13□□□□□ -1.27
RTN4IP1-204ENST00000539449 AGPAT2O15120 278 aa7.13□□□□□ -1.27
RTN4IP1-204ENST00000539449 SMCPP49901 116 aaPredicted RBP7.13□□□□□ -1.27
RTN4IP1-204ENST00000539449 ELLP55199 621 aaPredicted RBP7.13□□□□□ -1.27
RTN4IP1-204ENST00000539449 RHOGP84095 191 aa7.13□□□□□ -1.27
RTN4IP1-204ENST00000539449 ZNF90Q03938 601 aa7.13□□□□□ -1.27
RTN4IP1-204ENST00000539449 TIGITQ495A1 244 aa7.13□□□□□ -1.27
RTN4IP1-204ENST00000539449 GCSAMLQ5JQS6 135 aa7.13□□□□□ -1.27
RTN4IP1-204ENST00000539449 RBMS3Q6XE24 437 aaKnown RBP7.13□□□□□ -1.27
RTN4IP1-204ENST00000539449 Q6ZSV7 163 aa7.13□□□□□ -1.27
RTN4IP1-204ENST00000539449 SSX7Q7RTT5 188 aa7.13□□□□□ -1.27
RTN4IP1-204ENST00000539449 ZNF329Q86UD4 541 aa7.13□□□□□ -1.27
RTN4IP1-204ENST00000539449 GNPNAT1Q96EK6 184 aaPredicted RBP7.13□□□□□ -1.27
RTN4IP1-204ENST00000539449 ZNF414Q96IQ9 312 aa7.13□□□□□ -1.27
RTN4IP1-204ENST00000539449 CXorf58Q96LI9 332 aa7.13□□□□□ -1.27
RTN4IP1-204ENST00000539449 TMEM68Q96MH6 324 aa7.13□□□□□ -1.27
RTN4IP1-204ENST00000539449 PSMG3Q9BT73 122 aaPredicted RBP7.13□□□□□ -1.27
RTN4IP1-204ENST00000539449 TIMM9Q9Y5J7 89 aa7.13□□□□□ -1.27
RTN4IP1-204ENST00000539449 TRIM77I1YAP6 450 aa7.12□□□□□ -1.27
RTN4IP1-204ENST00000539449 CORTO00230 105 aa7.12□□□□□ -1.27
RTN4IP1-204ENST00000539449 IGLV1-40P01703 118 aa7.12□□□□□ -1.27
RTN4IP1-204ENST00000539449 CAMLGP49069 296 aa7.12□□□□□ -1.27
RTN4IP1-204ENST00000539449 RAB2AP61019 212 aa7.12□□□□□ -1.27
RTN4IP1-204ENST00000539449 ZNF726P1Q15940 193 aa7.12□□□□□ -1.27
RTN4IP1-204ENST00000539449 CLLU1Q5K131 121 aa7.12□□□□□ -1.27
RTN4IP1-204ENST00000539449 FFAR4Q5NUL3 377 aa7.12□□□□□ -1.27
RTN4IP1-204ENST00000539449 TEPPQ6URK8 271 aa7.12□□□□□ -1.27
RTN4IP1-204ENST00000539449 CYP2G1PQ6ZSU1 146 aa7.12□□□□□ -1.27
RTN4IP1-204ENST00000539449 Q8N2B8 174 aa7.12□□□□□ -1.27
RTN4IP1-204ENST00000539449 TMEM116Q8NCL8 245 aa7.12□□□□□ -1.27
RTN4IP1-204ENST00000539449 BPIFCQ8NFQ6 507 aa7.12□□□□□ -1.27
RTN4IP1-204ENST00000539449 OR1L6Q8NGR2 347 aa7.12□□□□□ -1.27
RTN4IP1-204ENST00000539449 OR4X1Q8NH49 305 aa7.12□□□□□ -1.27
RTN4IP1-204ENST00000539449 NPFFR1Q9GZQ6 430 aa7.12□□□□□ -1.27
RTN4IP1-204ENST00000539449 RPRMQ9NS64 109 aa7.12□□□□□ -1.27
RTN4IP1-204ENST00000539449 SERTAD4Q9NUC0 356 aa7.12□□□□□ -1.27
RTN4IP1-204ENST00000539449 PXMP4Q9Y6I8 212 aa7.12□□□□□ -1.27
RTN4IP1-204ENST00000539449 TCRBV4S1A1TA0A5B7 111 aa7.11□□□□□ -1.27
RTN4IP1-204ENST00000539449 CLN5O75503 358 aa7.11□□□□□ -1.27
RTN4IP1-204ENST00000539449 IGKV1-17P01599 117 aa7.11□□□□□ -1.27
RTN4IP1-204ENST00000539449 TRGV3P03979 118 aa7.11□□□□□ -1.27
RTN4IP1-204ENST00000539449 RNASE1P07998 156 aaKnown RBP7.11□□□□□ -1.27
RTN4IP1-204ENST00000539449 IGLC1P0CG04 106 aa7.11□□□□□ -1.27
RTN4IP1-204ENST00000539449 PF4V1P10720 104 aa7.11□□□□□ -1.27
RTN4IP1-204ENST00000539449 HIST1H1BP16401 226 aaKnown RBP7.11□□□□□ -1.27
RTN4IP1-204ENST00000539449 RPL29P47914 159 aaKnown RBP7.11□□□□□ -1.27
RTN4IP1-204ENST00000539449 MFAP4P55083 255 aa7.11□□□□□ -1.27
RTN4IP1-204ENST00000539449 HILS1P60008 231 aa7.11□□□□□ -1.27
RTN4IP1-204ENST00000539449 KIAA0141Q14154 515 aaPredicted RBP7.11□□□□□ -1.27
RTN4IP1-204ENST00000539449 SPATA31B1PQ5VZV4 182 aa7.11□□□□□ -1.27
RTN4IP1-204ENST00000539449 ETFRF1Q6IPR1 90 aa7.11□□□□□ -1.27
RTN4IP1-204ENST00000539449 SLC7A5P1Q8MH63 180 aa7.11□□□□□ -1.27
RTN4IP1-204ENST00000539449 STPG3Q8N7X2 389 aa7.11□□□□□ -1.27
RTN4IP1-204ENST00000539449 ZNF502Q8TBZ5 544 aa7.11□□□□□ -1.27
RTN4IP1-204ENST00000539449 ZNF418Q8TF45 676 aaPredicted RBP7.11□□□□□ -1.27
RTN4IP1-204ENST00000539449 CCDC140Q96MF4 163 aa7.11□□□□□ -1.27
RTN4IP1-204ENST00000539449 C21orf62Q9NYP8 219 aa7.11□□□□□ -1.27
RTN4IP1-204ENST00000539449 ZNF580Q9UK33 172 aa7.11□□□□□ -1.27
RTN4IP1-204ENST00000539449 ZFP92A6NM28 416 aa7.1□□□□□ -1.27
RTN4IP1-204ENST00000539449 ZNF705EA8MWA4 302 aaPredicted RBP7.1□□□□□ -1.27
RTN4IP1-204ENST00000539449 CLDN34H7C241 214 aa7.1□□□□□ -1.27
RTN4IP1-204ENST00000539449 MPDU1O75352 247 aa7.1□□□□□ -1.27
RTN4IP1-204ENST00000539449 ADMP35318 185 aa7.1□□□□□ -1.27
RTN4IP1-204ENST00000539449 TPPP2P59282 170 aa7.1□□□□□ -1.27
RTN4IP1-204ENST00000539449 CCL20P78556 96 aa7.1□□□□□ -1.27
RTN4IP1-204ENST00000539449 ATP5G2Q06055 141 aa7.1□□□□□ -1.27
RTN4IP1-204ENST00000539449 C15orf32Q32M92 178 aa7.1□□□□□ -1.27
RTN4IP1-204ENST00000539449 Q56UQ5 140 aa7.1□□□□□ -1.27
RTN4IP1-204ENST00000539449 AKR1C8PQ5T2L2 129 aa7.1□□□□□ -1.27
RTN4IP1-204ENST00000539449 EIF5AL1Q6IS14 154 aaKnown RBP7.1□□□□□ -1.27
RTN4IP1-204ENST00000539449 FAM122CQ6P4D5 195 aa7.1□□□□□ -1.27
RTN4IP1-204ENST00000539449 SPSB3Q6PJ21 355 aa7.1□□□□□ -1.27
RTN4IP1-204ENST00000539449 SHISA2Q6UWI4 295 aa7.1□□□□□ -1.27
RTN4IP1-204ENST00000539449 PATE2Q6UY27 113 aa7.1□□□□□ -1.27
RTN4IP1-204ENST00000539449 Q6ZRG5 221 aa7.1□□□□□ -1.27
RTN4IP1-204ENST00000539449 RPP25LQ8N5L8 163 aaKnown RBP7.1□□□□□ -1.27
RTN4IP1-204ENST00000539449 ZNF709Q8N972 641 aa7.1□□□□□ -1.27
RTN4IP1-204ENST00000539449 NECAP1Q8NC96 275 aa7.1□□□□□ -1.27
RTN4IP1-204ENST00000539449 FAM213BQ8TBF2 198 aa7.1□□□□□ -1.27
RTN4IP1-204ENST00000539449 VN1R17PQ8TDU5 208 aa7.1□□□□□ -1.27
RTN4IP1-204ENST00000539449 RNF141Q8WVD5 230 aa7.1□□□□□ -1.27
RTN4IP1-204ENST00000539449 TRGV9Q99603 122 aa7.1□□□□□ -1.27
RTN4IP1-204ENST00000539449 CHRDL1Q9BU40 450 aa7.1□□□□□ -1.27
RTN4IP1-204ENST00000539449 SLC39A9Q9NUM3 307 aa7.1□□□□□ -1.27
RTN4IP1-204ENST00000539449 A0A1B0GV50 99 aa7.09□□□□□ -1.27
RTN4IP1-204ENST00000539449 PSMB11A5LHX3 300 aa7.09□□□□□ -1.27
RTN4IP1-204ENST00000539449 OR2T8A6NH00 312 aa7.09□□□□□ -1.27
RTN4IP1-204ENST00000539449 C17orf112F2Z3M2 114 aa7.09□□□□□ -1.27
RTN4IP1-204ENST00000539449 HMGB3O15347 200 aaKnown RBP7.09□□□□□ -1.27
RTN4IP1-204ENST00000539449 TSPAN9O75954 239 aa7.09□□□□□ -1.27
RTN4IP1-204ENST00000539449 BRI3O95415 125 aa7.09□□□□□ -1.27
RTN4IP1-204ENST00000539449 TSPAN15O95858 294 aa7.09□□□□□ -1.27
RTN4IP1-204ENST00000539449 TRBV12-3P01733 135 aa7.09□□□□□ -1.27
RTN4IP1-204ENST00000539449 IGHV3-11P01762 117 aa7.09□□□□□ -1.27
RTN4IP1-204ENST00000539449 IGHG4P01861 327 aa7.09□□□□□ -1.27
RTN4IP1-204ENST00000539449 CTSGP08311 255 aa7.09□□□□□ -1.27
RTN4IP1-204ENST00000539449 RAB9AP51151 201 aa7.09□□□□□ -1.27
RTN4IP1-204ENST00000539449 B2MP61769 119 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms