RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 C5orf63A6NC05 138 aa2.15□□□□□ -2.07
VPS13B-207ENST00000518569 LINC00862A6NCI5 91 aa2.15□□□□□ -2.07
VPS13B-207ENST00000518569 C9JQL5 133 aa2.15□□□□□ -2.07
VPS13B-207ENST00000518569 OVOL1O14753 267 aa2.15□□□□□ -2.07
VPS13B-207ENST00000518569 ZNF207O43670 478 aaKnown RBP2.15□□□□□ -2.07
VPS13B-207ENST00000518569 SNAPC5O75971 98 aa2.15□□□□□ -2.07
VPS13B-207ENST00000518569 CXorf1O96002 111 aa2.15□□□□□ -2.07
VPS13B-207ENST00000518569 CISD3P0C7P0 127 aa2.15□□□□□ -2.07
VPS13B-207ENST00000518569 ZNF823P16415 610 aa2.15□□□□□ -2.07
VPS13B-207ENST00000518569 NTF3P20783 257 aa2.15□□□□□ -2.07
VPS13B-207ENST00000518569 KDELR1P24390 212 aa2.15□□□□□ -2.07
VPS13B-207ENST00000518569 CASP1P29466 404 aa2.15□□□□□ -2.07
VPS13B-207ENST00000518569 ATP5G3P48201 142 aa2.15□□□□□ -2.07
VPS13B-207ENST00000518569 NUDT2P50583 147 aa2.15□□□□□ -2.07
VPS13B-207ENST00000518569 AQP4P55087 323 aa2.15□□□□□ -2.07
VPS13B-207ENST00000518569 GABARAPL2P60520 117 aa2.15□□□□□ -2.07
VPS13B-207ENST00000518569 HOXC5Q00444 222 aa2.15□□□□□ -2.07
VPS13B-207ENST00000518569 ERCC8Q13216 396 aa2.15□□□□□ -2.07
VPS13B-207ENST00000518569 EIF3IQ13347 325 aaKnown RBP2.15□□□□□ -2.07
VPS13B-207ENST00000518569 MSMO1Q15800 293 aa2.15□□□□□ -2.07
VPS13B-207ENST00000518569 CST6Q15828 149 aa2.15□□□□□ -2.07
VPS13B-207ENST00000518569 RTL8BQ17RB0 113 aa2.15□□□□□ -2.07
VPS13B-207ENST00000518569 C6orf99Q4VX62 202 aa2.15□□□□□ -2.07
VPS13B-207ENST00000518569 MESTQ5EB52 335 aa2.15□□□□□ -2.07
VPS13B-207ENST00000518569 PABPC1L2AQ5JQF8 200 aa2.15□□□□□ -2.07
VPS13B-207ENST00000518569 LDLRAD2Q5SZI1 272 aa2.15□□□□□ -2.07
VPS13B-207ENST00000518569 ZNF773Q6PK81 442 aa2.15□□□□□ -2.07
VPS13B-207ENST00000518569 Q6Q795 121 aa2.15□□□□□ -2.07
VPS13B-207ENST00000518569 FBXW12Q6X9E4 464 aa2.15□□□□□ -2.07
VPS13B-207ENST00000518569 ZNF493Q6ZR52 646 aa2.15□□□□□ -2.07
VPS13B-207ENST00000518569 Q6ZRU5 148 aa2.15□□□□□ -2.07
VPS13B-207ENST00000518569 Q6ZS49 121 aa2.15□□□□□ -2.07
VPS13B-207ENST00000518569 CLEC20AQ6ZU45 233 aa2.15□□□□□ -2.07
VPS13B-207ENST00000518569 LINC00173Q6ZV60 143 aa2.15□□□□□ -2.07
VPS13B-207ENST00000518569 DAZ4Q86SG3 579 aaKnown RBP2.15□□□□□ -2.07
VPS13B-207ENST00000518569 LINC00596Q86U02 117 aa2.15□□□□□ -2.07
VPS13B-207ENST00000518569 CYB561D1Q8N8Q1 229 aa2.15□□□□□ -2.07
VPS13B-207ENST00000518569 C15orf56Q8N910 161 aa2.15□□□□□ -2.07
VPS13B-207ENST00000518569 OR10G2Q8NGC3 310 aa2.15□□□□□ -2.07
VPS13B-207ENST00000518569 OR51A4Q8NGJ6 313 aa2.15□□□□□ -2.07
VPS13B-207ENST00000518569 UBALD1Q8TB05 177 aa2.15□□□□□ -2.07
VPS13B-207ENST00000518569 RPS4Y2Q8TD47 263 aa2.15□□□□□ -2.07
VPS13B-207ENST00000518569 RTN4IP1Q8WWV3 396 aaPredicted RBP2.15□□□□□ -2.07
VPS13B-207ENST00000518569 COPS9Q8WXC6 57 aa2.15□□□□□ -2.07
VPS13B-207ENST00000518569 HIST1H2BAQ96A08 127 aa2.15□□□□□ -2.07
VPS13B-207ENST00000518569 SPACA5Q96QH8 159 aa2.15□□□□□ -2.07
VPS13B-207ENST00000518569 LINC01587Q99440 93 aa2.15□□□□□ -2.07
VPS13B-207ENST00000518569 SLC25A21Q9BQT8 299 aaPredicted RBP2.15□□□□□ -2.07
VPS13B-207ENST00000518569 TMEM191AQ9H0A3 160 aa2.15□□□□□ -2.07
VPS13B-207ENST00000518569 DAZ1Q9NQZ3 744 aaKnown RBP2.15□□□□□ -2.07
VPS13B-207ENST00000518569 SCN3BQ9NY72 215 aa2.15□□□□□ -2.07
VPS13B-207ENST00000518569 OR5AC2Q9NZP5 309 aa2.15□□□□□ -2.07
VPS13B-207ENST00000518569 CKLFQ9UBR5 152 aa2.15□□□□□ -2.07
VPS13B-207ENST00000518569 NAT8Q9UHE5 227 aa2.15□□□□□ -2.07
VPS13B-207ENST00000518569 ANAPC10Q9UM13 185 aa2.15□□□□□ -2.07
VPS13B-207ENST00000518569 KDM6AO15550 1401 aaPredicted RBP2.15□□□□□ -2.07
VPS13B-207ENST00000518569 SCN2AQ99250 2005 aa2.15□□□□□ -2.07
VPS13B-207ENST00000518569 KIF20BQ96Q89 1820 aa2.14□□□□□ -2.07
VPS13B-207ENST00000518569 YLPM1P49750 1951 aaKnown RBP2.14□□□□□ -2.07
VPS13B-207ENST00000518569 KTN1Q86UP2 1357 aaKnown RBP2.14□□□□□ -2.07
VPS13B-207ENST00000518569 ARID1AO14497 2285 aa2.14□□□□□ -2.07
VPS13B-207ENST00000518569 SMIM26A0A096LP01 95 aa2.14□□□□□ -2.07
VPS13B-207ENST00000518569 IGHV6-1A0A0B4J1U7 121 aa2.14□□□□□ -2.07
VPS13B-207ENST00000518569 IGHV5-51A0A0C4DH38 117 aa2.14□□□□□ -2.07
VPS13B-207ENST00000518569 SPRR5A0A1B0GTR4 108 aa2.14□□□□□ -2.07
VPS13B-207ENST00000518569 TRDV1A0A1B0GX56 115 aa2.14□□□□□ -2.07
VPS13B-207ENST00000518569 DHRS12A0PJE2 317 aa2.14□□□□□ -2.07
VPS13B-207ENST00000518569 IRGMA1A4Y4 181 aa2.14□□□□□ -2.07
VPS13B-207ENST00000518569 A8MWP6 167 aa2.14□□□□□ -2.07
VPS13B-207ENST00000518569 C1orf196B1AJZ1 125 aa2.14□□□□□ -2.07
VPS13B-207ENST00000518569 TMEM250H0YL14 139 aa2.14□□□□□ -2.07
VPS13B-207ENST00000518569 TLX1NBP0CAT3 122 aa2.14□□□□□ -2.07
VPS13B-207ENST00000518569 SMIM10L2AP0DMW4 78 aa2.14□□□□□ -2.07
VPS13B-207ENST00000518569 SMIM10L2BP0DMW5 78 aa2.14□□□□□ -2.07
VPS13B-207ENST00000518569 HLA-EP13747 358 aa2.14□□□□□ -2.07
VPS13B-207ENST00000518569 CD70P32970 193 aa2.14□□□□□ -2.07
VPS13B-207ENST00000518569 PSMB3P49720 205 aa2.14□□□□□ -2.07
VPS13B-207ENST00000518569 HERVK_113P63121 156 aa2.14□□□□□ -2.07
VPS13B-207ENST00000518569 MYL5Q02045 173 aa2.14□□□□□ -2.07
VPS13B-207ENST00000518569 TMEM241Q24JQ0 296 aa2.14□□□□□ -2.07
VPS13B-207ENST00000518569 VMA21Q3ZAQ7 101 aa2.14□□□□□ -2.07
VPS13B-207ENST00000518569 CLLU1OSQ5K130 101 aa2.14□□□□□ -2.07
VPS13B-207ENST00000518569 BCL2L15Q5TBC7 163 aa2.14□□□□□ -2.07
VPS13B-207ENST00000518569 FKBP1CQ5VVH2 108 aa2.14□□□□□ -2.07
VPS13B-207ENST00000518569 WDR59Q6PJI9 974 aa2.14□□□□□ -2.07
VPS13B-207ENST00000518569 ZCCHC24Q8N2G6 241 aaKnown RBP2.14□□□□□ -2.07
VPS13B-207ENST00000518569 C9orf62Q8N4C0 152 aa2.14□□□□□ -2.07
VPS13B-207ENST00000518569 SLC22A24Q8N4F4 322 aa2.14□□□□□ -2.07
VPS13B-207ENST00000518569 C10orf126Q8N4M7 172 aa2.14□□□□□ -2.07
VPS13B-207ENST00000518569 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.14□□□□□ -2.07
VPS13B-207ENST00000518569 OR2T4Q8NH00 348 aa2.14□□□□□ -2.07
VPS13B-207ENST00000518569 SLC25A40Q8TBP6 338 aa2.14□□□□□ -2.07
VPS13B-207ENST00000518569 MRPL30Q8TCC3 161 aaKnown RBP2.14□□□□□ -2.07
VPS13B-207ENST00000518569 C15orf40Q8WUR7 153 aa2.14□□□□□ -2.07
VPS13B-207ENST00000518569 PP6455Q8WZ26 134 aa2.14□□□□□ -2.07
VPS13B-207ENST00000518569 BORCS8Q96FH0 119 aa2.14□□□□□ -2.07
VPS13B-207ENST00000518569 ABHD14BQ96IU4 210 aa2.14□□□□□ -2.07
VPS13B-207ENST00000518569 IP6K3Q96PC2 410 aa2.14□□□□□ -2.07
VPS13B-207ENST00000518569 HSD17B10Q99714 261 aaKnown RBP2.14□□□□□ -2.07
VPS13B-207ENST00000518569 SPIN2AQ99865 258 aa2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms