RNA–Protein interactions for RNA: ENST00000505615.1

VCAN-206, Transcript of versican, humanhuman

TSL 5

Gene VCAN, Length 810 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-206ENST00000505615 C1QTNF4Q9BXJ3 329 aa4.83□□□□□ -1.64
VCAN-206ENST00000505615 QTRT1Q9BXR0 403 aaKnown RBP4.83□□□□□ -1.64
VCAN-206ENST00000505615 NXF2Q9GZY0 626 aaKnown RBP4.83□□□□□ -1.64
VCAN-206ENST00000505615 Q9H8V8 135 aa4.83□□□□□ -1.64
VCAN-206ENST00000505615 PTTG2Q9NZH5 202 aa4.83□□□□□ -1.64
VCAN-206ENST00000505615 CLEC2DQ9UHP7 191 aa4.83□□□□□ -1.64
VCAN-206ENST00000505615 RFNGQ9Y644 331 aa4.83□□□□□ -1.64
VCAN-206ENST00000505615 IGKV1D-8A0A087WSZ0 117 aa4.82□□□□□ -1.64
VCAN-206ENST00000505615 A0A0A0MQY5 61 aa4.82□□□□□ -1.64
VCAN-206ENST00000505615 PNMA8CA0A1B0GUJ8 204 aa4.82□□□□□ -1.64
VCAN-206ENST00000505615 J3QRK9 145 aa4.82□□□□□ -1.64
VCAN-206ENST00000505615 UPK2O00526 184 aa4.82□□□□□ -1.64
VCAN-206ENST00000505615 PRAF2O60831 178 aa4.82□□□□□ -1.64
VCAN-206ENST00000505615 HRASP01112 189 aa4.82□□□□□ -1.64
VCAN-206ENST00000505615 HLA-DQB1P01920 261 aa4.82□□□□□ -1.64
VCAN-206ENST00000505615 EIF4EP06730 217 aaKnown RBP4.82□□□□□ -1.64
VCAN-206ENST00000505615 CD36P16671 472 aa4.82□□□□□ -1.64
VCAN-206ENST00000505615 INSL4Q14641 139 aa4.82□□□□□ -1.64
VCAN-206ENST00000505615 SSX1Q16384 188 aa4.82□□□□□ -1.64
VCAN-206ENST00000505615 POU2AF1Q16633 256 aa4.82□□□□□ -1.64
VCAN-206ENST00000505615 TOMM20LQ6UXN7 152 aa4.82□□□□□ -1.64
VCAN-206ENST00000505615 STXBP6Q8NFX7 210 aa4.82□□□□□ -1.64
VCAN-206ENST00000505615 TCTEX1D2Q8WW35 142 aa4.82□□□□□ -1.64
VCAN-206ENST00000505615 HSD17B10Q99714 261 aaKnown RBP4.82□□□□□ -1.64
VCAN-206ENST00000505615 URM1Q9BTM9 101 aaKnown RBP4.82□□□□□ -1.64
VCAN-206ENST00000505615 PUS1Q9Y606 427 aaKnown RBP eCLIP4.82□□□□□ -1.64
VCAN-206ENST00000505615 RPS10-NUDT3A0A1W2PQS6 291 aa4.81□□□□□ -1.64
VCAN-206ENST00000505615 H3BMM0 161 aa4.81□□□□□ -1.64
VCAN-206ENST00000505615 I3L2K1 104 aa4.81□□□□□ -1.64
VCAN-206ENST00000505615 CYB5BO43169 146 aa4.81□□□□□ -1.64
VCAN-206ENST00000505615 NUDT3O95989 172 aa4.81□□□□□ -1.64
VCAN-206ENST00000505615 FGF2P09038 288 aa4.81□□□□□ -1.64
VCAN-206ENST00000505615 DCKP27707 260 aa4.81□□□□□ -1.64
VCAN-206ENST00000505615 ALDH3B2P48448 385 aa4.81□□□□□ -1.64
VCAN-206ENST00000505615 CCL18P55774 89 aa4.81□□□□□ -1.64
VCAN-206ENST00000505615 LINC00315P59091 139 aa4.81□□□□□ -1.64
VCAN-206ENST00000505615 DAD1P61803 113 aa4.81□□□□□ -1.64
VCAN-206ENST00000505615 USF2Q15853 346 aaPredicted RBP4.81□□□□□ -1.64
VCAN-206ENST00000505615 ANXA2RQ3ZCQ2 193 aa4.81□□□□□ -1.64
VCAN-206ENST00000505615 THOC7Q6I9Y2 204 aaKnown RBP4.81□□□□□ -1.64
VCAN-206ENST00000505615 FAM159AQ6UWV7 190 aa4.81□□□□□ -1.64
VCAN-206ENST00000505615 Q6ZS49 121 aa4.81□□□□□ -1.64
VCAN-206ENST00000505615 SSX7Q7RTT5 188 aa4.81□□□□□ -1.64
VCAN-206ENST00000505615 MITD1Q8WV92 249 aa4.81□□□□□ -1.64
VCAN-206ENST00000505615 GFI1Q99684 422 aa4.81□□□□□ -1.64
VCAN-206ENST00000505615 GINS3Q9BRX5 216 aa4.81□□□□□ -1.64
VCAN-206ENST00000505615 COMMD5Q9GZQ3 224 aa4.81□□□□□ -1.64
VCAN-206ENST00000505615 HRASLSQ9HDD0 168 aa4.81□□□□□ -1.64
VCAN-206ENST00000505615 ZNF586Q9NXT0 402 aa4.81□□□□□ -1.64
VCAN-206ENST00000505615 SPATA2Q9UM82 520 aa4.81□□□□□ -1.64
VCAN-206ENST00000505615 OR2W1Q9Y3N9 320 aa4.81□□□□□ -1.64
VCAN-206ENST00000505615 YTHDF2Q9Y5A9 579 aaKnown RBP4.81□□□□□ -1.64
VCAN-206ENST00000505615 IGHV3OR16-12A0A075B7B8 117 aa4.8□□□□□ -1.64
VCAN-206ENST00000505615 MFNGO00587 321 aa4.8□□□□□ -1.64
VCAN-206ENST00000505615 EI24O14681 340 aa4.8□□□□□ -1.64
VCAN-206ENST00000505615 IGHV3-48P01763 117 aa4.8□□□□□ -1.64
VCAN-206ENST00000505615 DNAH10OSP0CZ25 163 aa4.8□□□□□ -1.64
VCAN-206ENST00000505615 HLA-DRB4P13762 266 aa4.8□□□□□ -1.64
VCAN-206ENST00000505615 GNB3P16520 340 aa4.8□□□□□ -1.64
VCAN-206ENST00000505615 GNRHRP30968 328 aa4.8□□□□□ -1.64
VCAN-206ENST00000505615 RPS19P39019 145 aaKnown RBP4.8□□□□□ -1.64
VCAN-206ENST00000505615 NUTF2P61970 127 aaKnown RBP4.8□□□□□ -1.64
VCAN-206ENST00000505615 NHLH2Q02577 135 aa4.8□□□□□ -1.64
VCAN-206ENST00000505615 P2RY14Q15391 338 aa4.8□□□□□ -1.64
VCAN-206ENST00000505615 PSMG4Q5JS54 123 aa4.8□□□□□ -1.64
VCAN-206ENST00000505615 CD164L2Q6UWJ8 174 aa4.8□□□□□ -1.64
VCAN-206ENST00000505615 GSG1LQ6UXU4 331 aa4.8□□□□□ -1.64
VCAN-206ENST00000505615 HSD17B13Q7Z5P4 300 aaPredicted RBP4.8□□□□□ -1.64
VCAN-206ENST00000505615 TPRA1Q86W33 373 aa4.8□□□□□ -1.64
VCAN-206ENST00000505615 PHYHIPQ92561 330 aa4.8□□□□□ -1.64
VCAN-206ENST00000505615 CENPNQ96H22 339 aaPredicted RBP4.8□□□□□ -1.64
VCAN-206ENST00000505615 Q96MT0 163 aa4.8□□□□□ -1.64
VCAN-206ENST00000505615 ALKBH7Q9BT30 221 aaPredicted RBP4.8□□□□□ -1.64
VCAN-206ENST00000505615 UPK3BQ9BT76 320 aa4.8□□□□□ -1.64
VCAN-206ENST00000505615 DCSTAMPQ9H295 470 aa4.8□□□□□ -1.64
VCAN-206ENST00000505615 AUNIPQ9H7T9 357 aa4.8□□□□□ -1.64
VCAN-206ENST00000505615 NDUFA4L2Q9NRX3 87 aa4.8□□□□□ -1.64
VCAN-206ENST00000505615 NUDT15Q9NV35 164 aa4.8□□□□□ -1.64
VCAN-206ENST00000505615 TAS2R8Q9NYW2 309 aa4.8□□□□□ -1.64
VCAN-206ENST00000505615 DIMT1Q9UNQ2 313 aaKnown RBP4.8□□□□□ -1.64
VCAN-206ENST00000505615 AP4S1Q9Y587 144 aa4.8□□□□□ -1.64
VCAN-206ENST00000505615 HLA-DRB4X5D2U9 266 aa4.8□□□□□ -1.64
VCAN-206ENST00000505615 TEX50A0A1B0GTY4 177 aa4.79□□□□□ -1.64
VCAN-206ENST00000505615 A0A1B0GU03 582 aa4.79□□□□□ -1.64
VCAN-206ENST00000505615 SLC17A2O00624 439 aa4.79□□□□□ -1.64
VCAN-206ENST00000505615 RBFOX2O43251 390 aaKnown RBP eCLIP4.79□□□□□ -1.64
VCAN-206ENST00000505615 SLC22A5O76082 557 aa4.79□□□□□ -1.64
VCAN-206ENST00000505615 APOA1P02647 267 aa4.79□□□□□ -1.64
VCAN-206ENST00000505615 TRAPPC2P0DI81 140 aa4.79□□□□□ -1.64
VCAN-206ENST00000505615 TRAPPC2BP0DI82 140 aa4.79□□□□□ -1.64
VCAN-206ENST00000505615 FCGR1AP12314 374 aa4.79□□□□□ -1.64
VCAN-206ENST00000505615 NFYAP23511 347 aaPredicted RBP4.79□□□□□ -1.64
VCAN-206ENST00000505615 S100A5P33763 92 aa4.79□□□□□ -1.64
VCAN-206ENST00000505615 P2RY1P47900 373 aa4.79□□□□□ -1.64
VCAN-206ENST00000505615 FXYD7P58549 80 aa4.79□□□□□ -1.64
VCAN-206ENST00000505615 RBM48Q5RL73 367 aaKnown RBP4.79□□□□□ -1.64
VCAN-206ENST00000505615 TMEM69Q5SWH9 247 aa4.79□□□□□ -1.64
VCAN-206ENST00000505615 OGFRL1Q5TC84 451 aaPredicted RBP4.79□□□□□ -1.64
VCAN-206ENST00000505615 SIGLEC15Q6ZMC9 328 aa4.79□□□□□ -1.64
VCAN-206ENST00000505615 C1orf158Q8N1D5 194 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms