RNA–Protein interactions for RNA: ENST00000504178.1

SYNPO2-205, Transcript of synaptopodin 2, humanhuman

TSL 1 (best)

Gene SYNPO2, Length 6,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-205ENST00000504178 PHLDA1Q8WV24 401 aaPredicted RBP5.93□□□□□ -1.46
SYNPO2-205ENST00000504178 PIKFYVEQ9Y2I7 2098 aa5.93□□□□□ -1.46
SYNPO2-205ENST00000504178 IGHV3-73A0A0B4J1V6 119 aa5.92□□□□□ -1.46
SYNPO2-205ENST00000504178 B4DSR2 109 aa5.92□□□□□ -1.46
SYNPO2-205ENST00000504178 LILRA1O75019 489 aa5.92□□□□□ -1.46
SYNPO2-205ENST00000504178 C1QTNF9P0C862 333 aa5.92□□□□□ -1.46
SYNPO2-205ENST00000504178 EFNB3Q15768 340 aa5.92□□□□□ -1.46
SYNPO2-205ENST00000504178 RNF126Q9BV68 326 aa5.92□□□□□ -1.46
SYNPO2-205ENST00000504178 PGPEP1LA6NFU8 196 aa5.92□□□□□ -1.46
SYNPO2-205ENST00000504178 J3QRE1 110 aa5.92□□□□□ -1.46
SYNPO2-205ENST00000504178 FOXG1P55316 489 aaPredicted RBP5.92□□□□□ -1.46
SYNPO2-205ENST00000504178 C15orf32Q32M92 178 aa5.92□□□□□ -1.46
SYNPO2-205ENST00000504178 BRD3OSQ6XYD6 125 aa5.92□□□□□ -1.46
SYNPO2-205ENST00000504178 RNF182Q8N6D2 247 aa5.92□□□□□ -1.46
SYNPO2-205ENST00000504178 LINC01356Q8N9X3 169 aa5.92□□□□□ -1.46
SYNPO2-205ENST00000504178 GAFA1Q96PS6 74 aa5.92□□□□□ -1.46
SYNPO2-205ENST00000504178 WFDC1Q9HC57 220 aa5.92□□□□□ -1.46
SYNPO2-205ENST00000504178 CYSLTR1Q9Y271 337 aa5.92□□□□□ -1.46
SYNPO2-205ENST00000504178 M0R1W7 72 aa5.92□□□□□ -1.46
SYNPO2-205ENST00000504178 TRBV7-1A0A0A6YYK4 115 aa5.92□□□□□ -1.46
SYNPO2-205ENST00000504178 FAM89BQ8N5H3 189 aa5.92□□□□□ -1.46
SYNPO2-205ENST00000504178 COQ2Q96H96 371 aa5.92□□□□□ -1.46
SYNPO2-205ENST00000504178 TRAV12-3A0A0B4J271 114 aa5.92□□□□□ -1.46
SYNPO2-205ENST00000504178 EFNA2O43921 213 aa5.92□□□□□ -1.46
SYNPO2-205ENST00000504178 DPM2O94777 84 aa5.92□□□□□ -1.46
SYNPO2-205ENST00000504178 SRSF6Q13247 344 aaKnown RBP5.92□□□□□ -1.46
SYNPO2-205ENST00000504178 ORMDL2Q53FV1 153 aa5.92□□□□□ -1.46
SYNPO2-205ENST00000504178 KIR3DL3Q8N743 410 aa5.92□□□□□ -1.46
SYNPO2-205ENST00000504178 TRAV2A0A0B4J234 112 aa5.91□□□□□ -1.46
SYNPO2-205ENST00000504178 HBDP02042 147 aa5.91□□□□□ -1.46
SYNPO2-205ENST00000504178 MDS2Q8NDY4 140 aa5.91□□□□□ -1.46
SYNPO2-205ENST00000504178 FBLN5Q9UBX5 448 aa5.91□□□□□ -1.46
SYNPO2-205ENST00000504178 F2Z2F3 143 aa5.91□□□□□ -1.46
SYNPO2-205ENST00000504178 BTCP35070 178 aa5.91□□□□□ -1.46
SYNPO2-205ENST00000504178 PAX2Q02962 417 aa5.91□□□□□ -1.46
SYNPO2-205ENST00000504178 TMEM95Q3KNT9 176 aa5.91□□□□□ -1.46
SYNPO2-205ENST00000504178 CRIPAKQ8N1N5 446 aa5.91□□□□□ -1.46
SYNPO2-205ENST00000504178 VSIRQ9H7M9 311 aa5.91□□□□□ -1.46
SYNPO2-205ENST00000504178 IGHV3-64A0A075B6Q5 118 aa5.91□□□□□ -1.46
SYNPO2-205ENST00000504178 A0A1B0GWB2 263 aa5.91□□□□□ -1.46
SYNPO2-205ENST00000504178 A0A1W2PRE2 83 aa5.91□□□□□ -1.46
SYNPO2-205ENST00000504178 SRRM5B3KS81 715 aa5.91□□□□□ -1.46
SYNPO2-205ENST00000504178 H3BUX3 64 aa5.91□□□□□ -1.46
SYNPO2-205ENST00000504178 GHRHP01286 108 aa5.91□□□□□ -1.46
SYNPO2-205ENST00000504178 SELLP14151 372 aa5.91□□□□□ -1.46
SYNPO2-205ENST00000504178 SLC25A48Q6ZT89 311 aaKnown RBP5.91□□□□□ -1.46
SYNPO2-205ENST00000504178 GFI1Q99684 422 aa5.91□□□□□ -1.46
SYNPO2-205ENST00000504178 OSTCQ9NRP0 149 aa5.91□□□□□ -1.46
SYNPO2-205ENST00000504178 MYO7AQ13402 2215 aa5.91□□□□□ -1.46
SYNPO2-205ENST00000504178 IGKCP01834 107 aa5.91□□□□□ -1.46
SYNPO2-205ENST00000504178 C1QL4Q86Z23 238 aa5.91□□□□□ -1.46
SYNPO2-205ENST00000504178 RPUSD1Q9UJJ7 312 aaKnown RBP5.91□□□□□ -1.46
SYNPO2-205ENST00000504178 SCN5AQ14524 2016 aa5.91□□□□□ -1.46
SYNPO2-205ENST00000504178 IGKV1-27A0A075B6S5 117 aa5.91□□□□□ -1.46
SYNPO2-205ENST00000504178 IGKV1D-8A0A087WSZ0 117 aa5.91□□□□□ -1.46
SYNPO2-205ENST00000504178 IGKV1-12A0A0C4DH73 117 aa5.91□□□□□ -1.46
SYNPO2-205ENST00000504178 FAM223BA6NKX1 122 aa5.91□□□□□ -1.46
SYNPO2-205ENST00000504178 SERF1AO75920 110 aa5.91□□□□□ -1.46
SYNPO2-205ENST00000504178 IGKV1D-12P01611 117 aa5.91□□□□□ -1.46
SYNPO2-205ENST00000504178 FAM223AQ8IWN6 122 aa5.91□□□□□ -1.46
SYNPO2-205ENST00000504178 SLC25A39Q9BZJ4 359 aaPredicted RBP5.91□□□□□ -1.46
SYNPO2-205ENST00000504178 DOCK4Q8N1I0 1966 aa5.91□□□□□ -1.46
SYNPO2-205ENST00000504178 CCDC88CQ9P219 2028 aa5.91□□□□□ -1.46
SYNPO2-205ENST00000504178 BUB1B-PAK6H3BSN5 160 aa5.91□□□□□ -1.46
SYNPO2-205ENST00000504178 TYMSP04818 313 aa5.91□□□□□ -1.46
SYNPO2-205ENST00000504178 TDGF1P3P51864 188 aa5.91□□□□□ -1.46
SYNPO2-205ENST00000504178 NDPQ00604 133 aa5.91□□□□□ -1.46
SYNPO2-205ENST00000504178 KLHL30-AS1Q8NEE0 82 aa5.91□□□□□ -1.46
SYNPO2-205ENST00000504178 H0YJW9 148 aa5.9□□□□□ -1.46
SYNPO2-205ENST00000504178 SLC25A16P16260 332 aa5.9□□□□□ -1.46
SYNPO2-205ENST00000504178 ACTL10Q5JWF8 245 aa5.9□□□□□ -1.46
SYNPO2-205ENST00000504178 NR2C2APQ86WQ0 139 aa5.9□□□□□ -1.46
SYNPO2-205ENST00000504178 TMEM170AQ8WVE7 144 aa5.9□□□□□ -1.46
SYNPO2-205ENST00000504178 SCRT1Q9BWW7 348 aa5.9□□□□□ -1.46
SYNPO2-205ENST00000504178 CRIM1Q9NZV1 1036 aa5.9□□□□□ -1.46
SYNPO2-205ENST00000504178 A0A1B0GV90 55 aa5.9□□□□□ -1.46
SYNPO2-205ENST00000504178 OOSP1A8MZH6 123 aa5.9□□□□□ -1.46
SYNPO2-205ENST00000504178 STAG3L3P0CL85 134 aa5.9□□□□□ -1.46
SYNPO2-205ENST00000504178 MPZP25189 248 aa5.9□□□□□ -1.46
SYNPO2-205ENST00000504178 SPATA31B1PQ5VZV4 182 aa5.9□□□□□ -1.46
SYNPO2-205ENST00000504178 DTX1Q86Y01 620 aa5.9□□□□□ -1.46
SYNPO2-205ENST00000504178 LINC00518Q8N0U6 118 aa5.9□□□□□ -1.46
SYNPO2-205ENST00000504178 SPCS1Q9Y6A9 102 aa5.9□□□□□ -1.46
SYNPO2-205ENST00000504178 DICER1Q9UPY3 1922 aaKnown RBP5.9□□□□□ -1.46
SYNPO2-205ENST00000504178 CD5P06127 495 aa5.9□□□□□ -1.46
SYNPO2-205ENST00000504178 LINC00158P58513 81 aa5.9□□□□□ -1.46
SYNPO2-205ENST00000504178 SRSF3P84103 164 aaKnown RBP5.9□□□□□ -1.46
SYNPO2-205ENST00000504178 LAGE3Q14657 143 aa5.9□□□□□ -1.46
SYNPO2-205ENST00000504178 C10orf55Q5SWW7 151 aa5.9□□□□□ -1.46
SYNPO2-205ENST00000504178 ZSWIM8A7E2V4 1837 aa5.9□□□□□ -1.47
SYNPO2-205ENST00000504178 TRGV1A0A0A0MS02 117 aa5.9□□□□□ -1.47
SYNPO2-205ENST00000504178 LINC00614P0C842 121 aa5.9□□□□□ -1.47
SYNPO2-205ENST00000504178 COL8A2P25067 703 aa5.9□□□□□ -1.47
SYNPO2-205ENST00000504178 CKS1BP61024 79 aa5.9□□□□□ -1.47
SYNPO2-205ENST00000504178 SPSB3Q6PJ21 355 aa5.9□□□□□ -1.47
SYNPO2-205ENST00000504178 HEPN1Q6WQI6 88 aa5.9□□□□□ -1.47
SYNPO2-205ENST00000504178 LCNL1Q6ZST4 164 aa5.9□□□□□ -1.47
SYNPO2-205ENST00000504178 RNF5Q99942 180 aa5.9□□□□□ -1.47
SYNPO2-205ENST00000504178 NRN1Q9NPD7 142 aa5.9□□□□□ -1.47
SYNPO2-205ENST00000504178 PSCAO43653 123 aa5.9□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms