RNA–Protein interactions for RNA: ENST00000498678.5

HOXB3-212, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HOXB3, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-212ENST00000498678 HOXA5P20719 270 aa20.63■□□□□ 0.89
HOXB3-212ENST00000498678 NDPQ00604 133 aa20.63■□□□□ 0.89
HOXB3-212ENST00000498678 KRTAP1-3Q8IUG1 177 aa20.63■□□□□ 0.89
HOXB3-212ENST00000498678 SVIPQ8NHG7 77 aa20.63■□□□□ 0.89
HOXB3-212ENST00000498678 RAB24Q969Q5 203 aa20.63■□□□□ 0.89
HOXB3-212ENST00000498678 SOX21Q9Y651 276 aaPredicted RBP20.63■□□□□ 0.89
HOXB3-212ENST00000498678 HELZ2Q9BYK8 2649 aaKnown RBP20.62■□□□□ 0.89
HOXB3-212ENST00000498678 SEC14L6B5MCN3 397 aa20.62■□□□□ 0.89
HOXB3-212ENST00000498678 TSTD3H0UI37 97 aa20.62■□□□□ 0.89
HOXB3-212ENST00000498678 OR10J1P30954 320 aa20.62■□□□□ 0.89
HOXB3-212ENST00000498678 PYY3Q5JQD4 70 aa20.62■□□□□ 0.89
HOXB3-212ENST00000498678 PRSS57Q6UWY2 283 aa20.62■□□□□ 0.89
HOXB3-212ENST00000498678 ARPC1AQ92747 370 aa20.62■□□□□ 0.89
HOXB3-212ENST00000498678 WNT10AQ9GZT5 417 aa20.62■□□□□ 0.89
HOXB3-212ENST00000498678 CORTO00230 105 aa20.62■□□□□ 0.89
HOXB3-212ENST00000498678 HMGB3O15347 200 aaKnown RBP20.62■□□□□ 0.89
HOXB3-212ENST00000498678 ETFRF1Q6IPR1 90 aa20.62■□□□□ 0.89
HOXB3-212ENST00000498678 C1QL4Q86Z23 238 aa20.62■□□□□ 0.89
HOXB3-212ENST00000498678 PIFOQ8TCI5 191 aa20.62■□□□□ 0.89
HOXB3-212ENST00000498678 NPIPB3Q92617 1050 aa20.62■□□□□ 0.89
HOXB3-212ENST00000498678 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP20.62■□□□□ 0.89
HOXB3-212ENST00000498678 APCP25054 2843 aa20.62■□□□□ 0.89
HOXB3-212ENST00000498678 TGFAP01135 160 aa20.61■□□□□ 0.89
HOXB3-212ENST00000498678 S100A2P29034 98 aa20.61■□□□□ 0.89
HOXB3-212ENST00000498678 CDC34P49427 236 aaPredicted RBP20.61■□□□□ 0.89
HOXB3-212ENST00000498678 SLC25A33Q9BSK2 321 aa20.61■□□□□ 0.89
HOXB3-212ENST00000498678 IGHV7-81A0A0B4J1V7 117 aa20.61■□□□□ 0.89
HOXB3-212ENST00000498678 SFTA3P0C7M3 94 aa20.61■□□□□ 0.89
HOXB3-212ENST00000498678 HAGHQ16775 308 aa20.61■□□□□ 0.89
HOXB3-212ENST00000498678 Q96MF0 132 aa20.61■□□□□ 0.89
HOXB3-212ENST00000498678 RASL11BQ9BPW5 248 aa20.61■□□□□ 0.89
HOXB3-212ENST00000498678 HLA-DRB1P01911 266 aa20.6■□□□□ 0.89
HOXB3-212ENST00000498678 CDX1P47902 265 aaPredicted RBP20.6■□□□□ 0.89
HOXB3-212ENST00000498678 ASPHD1Q5U4P2 390 aa20.6■□□□□ 0.89
HOXB3-212ENST00000498678 GPR61Q9BZJ8 451 aa20.6■□□□□ 0.89
HOXB3-212ENST00000498678 J3QLI3 93 aa20.59■□□□□ 0.89
HOXB3-212ENST00000498678 IGHV4-31P0DP07 118 aa20.59■□□□□ 0.89
HOXB3-212ENST00000498678 GNG13Q9P2W3 67 aa20.59■□□□□ 0.89
HOXB3-212ENST00000498678 RND2P52198 227 aa20.59■□□□□ 0.89
HOXB3-212ENST00000498678 THAP8Q8NA92 274 aa20.59■□□□□ 0.89
HOXB3-212ENST00000498678 MT-CO2P00403 227 aa20.58■□□□□ 0.89
HOXB3-212ENST00000498678 EGR2P11161 476 aaPredicted RBP20.58■□□□□ 0.89
HOXB3-212ENST00000498678 GATA2P23769 480 aaPredicted RBP20.58■□□□□ 0.89
HOXB3-212ENST00000498678 TMEM249Q2WGJ8 235 aa20.58■□□□□ 0.89
HOXB3-212ENST00000498678 SMDT1Q9H4I9 107 aa20.58■□□□□ 0.89
HOXB3-212ENST00000498678 IGKV1D-37A0A075B6S9 117 aa20.58■□□□□ 0.88
HOXB3-212ENST00000498678 ZNF506Q5JVG8 444 aa20.58■□□□□ 0.88
HOXB3-212ENST00000498678 IGHV3-21A0A0B4J1V1 117 aa20.57■□□□□ 0.88
HOXB3-212ENST00000498678 A0A1W2PPV4 95 aa20.57■□□□□ 0.88
HOXB3-212ENST00000498678 ICAM4Q14773 271 aa20.57■□□□□ 0.88
HOXB3-212ENST00000498678 CYP2G1PQ6ZSU1 146 aa20.57■□□□□ 0.88
HOXB3-212ENST00000498678 TMEM116Q8NCL8 245 aa20.57■□□□□ 0.88
HOXB3-212ENST00000498678 HSPB9Q9BQS6 159 aa20.57■□□□□ 0.88
HOXB3-212ENST00000498678 NPIPB5A8MRT5 1133 aa20.56■□□□□ 0.88
HOXB3-212ENST00000498678 PMS2P11Q13670 270 aa20.56■□□□□ 0.88
HOXB3-212ENST00000498678 GAR1Q9NY12 217 aaKnown RBP20.56■□□□□ 0.88
HOXB3-212ENST00000498678 NBPF19A0A087WUL8 3843 aa20.56■□□□□ 0.88
HOXB3-212ENST00000498678 I3L2K1 104 aa20.56■□□□□ 0.88
HOXB3-212ENST00000498678 TMEM219Q86XT9 240 aa20.56■□□□□ 0.88
HOXB3-212ENST00000498678 TTC9CQ8N5M4 171 aa20.56■□□□□ 0.88
HOXB3-212ENST00000498678 OR1L6Q8NGR2 347 aa20.56■□□□□ 0.88
HOXB3-212ENST00000498678 CR1P17927 2039 aa20.55■□□□□ 0.88
HOXB3-212ENST00000498678 LOC102723971A0A1B0GUV8 181 aa20.55■□□□□ 0.88
HOXB3-212ENST00000498678 ZFP92A6NM28 416 aa20.55■□□□□ 0.88
HOXB3-212ENST00000498678 RAB5AP20339 215 aa20.55■□□□□ 0.88
HOXB3-212ENST00000498678 C5orf56Q8N8D9 126 aa20.55■□□□□ 0.88
HOXB3-212ENST00000498678 SLC35B3Q9H1N7 401 aa20.55■□□□□ 0.88
HOXB3-212ENST00000498678 CELSR1Q9NYQ6 3014 aa20.55■□□□□ 0.88
HOXB3-212ENST00000498678 TCRBV4S1A1TA0A5B7 111 aa20.55■□□□□ 0.88
HOXB3-212ENST00000498678 SEPSECSQ9HD40 501 aaKnown RBP20.55■□□□□ 0.88
HOXB3-212ENST00000498678 ABCA1O95477 2261 aa20.54■□□□□ 0.88
HOXB3-212ENST00000498678 BCL2P10415 239 aa20.54■□□□□ 0.88
HOXB3-212ENST00000498678 KHDC3LQ587J8 217 aa20.54■□□□□ 0.88
HOXB3-212ENST00000498678 ZNF90Q03938 601 aa20.53■□□□□ 0.88
HOXB3-212ENST00000498678 C22orf15Q8WYQ4 148 aa20.53■□□□□ 0.88
HOXB3-212ENST00000498678 MOB4Q9Y3A3 225 aa20.53■□□□□ 0.88
HOXB3-212ENST00000498678 K7EIM0 57 aa20.52■□□□□ 0.88
HOXB3-212ENST00000498678 RHOBP62745 196 aa20.52■□□□□ 0.88
HOXB3-212ENST00000498678 FANCD2OSQ96PS1 177 aa20.52■□□□□ 0.88
HOXB3-212ENST00000498678 CSMD1Q96PZ7 3565 aa20.52■□□□□ 0.88
HOXB3-212ENST00000498678 HSPB1P04792 205 aaKnown RBP20.52■□□□□ 0.88
HOXB3-212ENST00000498678 SRP19P09132 144 aaKnown RBP20.52■□□□□ 0.88
HOXB3-212ENST00000498678 STAG3L2P0CL84 134 aa20.52■□□□□ 0.88
HOXB3-212ENST00000498678 STAG3L3P0CL85 134 aa20.52■□□□□ 0.88
HOXB3-212ENST00000498678 SPATA31B1PQ5VZV4 182 aa20.52■□□□□ 0.88
HOXB3-212ENST00000498678 SLC35E3Q7Z769 313 aa20.52■□□□□ 0.88
HOXB3-212ENST00000498678 SGMS2Q8NHU3 365 aa20.52■□□□□ 0.88
HOXB3-212ENST00000498678 TNFRSF19Q9NS68 423 aa20.52■□□□□ 0.88
HOXB3-212ENST00000498678 SH2D7A6NKC9 451 aaPredicted RBP20.51■□□□□ 0.87
HOXB3-212ENST00000498678 TRGV9Q99603 122 aa20.51■□□□□ 0.87
HOXB3-212ENST00000498678 IGLV11-55A0A075B6I3 123 aa20.51■□□□□ 0.87
HOXB3-212ENST00000498678 CXorf65A6NEN9 183 aa20.51■□□□□ 0.87
HOXB3-212ENST00000498678 H3BUX3 64 aa20.51■□□□□ 0.87
HOXB3-212ENST00000498678 IFNA1P01562 189 aa20.51■□□□□ 0.87
HOXB3-212ENST00000498678 AMY1AP04745 511 aa20.51■□□□□ 0.87
HOXB3-212ENST00000498678 SELENOTP62341 195 aa20.51■□□□□ 0.87
HOXB3-212ENST00000498678 AKIRIN2Q53H80 203 aa20.51■□□□□ 0.87
HOXB3-212ENST00000498678 SAPCD1Q5SSQ6 148 aa20.51■□□□□ 0.87
HOXB3-212ENST00000498678 FAM78BQ5VT40 261 aa20.5■□□□□ 0.87
HOXB3-212ENST00000498678 OR5T1Q8NG75 326 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms