RNA–Protein interactions for RNA: ENST00000483338.1

COL4A5-205, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 3,622 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-205ENST00000483338 PCSK4Q6UW60 755 aa6.4□□□□□ -1.39
COL4A5-205ENST00000483338 Q6ZS52 159 aa6.4□□□□□ -1.39
COL4A5-205ENST00000483338 ARHGEF17Q96PE2 2063 aaPredicted RBP6.39□□□□□ -1.39
COL4A5-205ENST00000483338 HIGD1CA8MV81 97 aa6.39□□□□□ -1.39
COL4A5-205ENST00000483338 GP1BBP13224 206 aa6.39□□□□□ -1.39
COL4A5-205ENST00000483338 RBM11P57052 281 aaKnown RBP6.39□□□□□ -1.39
COL4A5-205ENST00000483338 HHEXQ03014 270 aa6.39□□□□□ -1.39
COL4A5-205ENST00000483338 MIC13Q5XKP0 118 aa6.39□□□□□ -1.39
COL4A5-205ENST00000483338 PIP4P1Q86T03 277 aa6.39□□□□□ -1.39
COL4A5-205ENST00000483338 SNRNP40Q96DI7 357 aaKnown RBP6.39□□□□□ -1.39
COL4A5-205ENST00000483338 SIT1Q9Y3P8 196 aa6.39□□□□□ -1.39
COL4A5-205ENST00000483338 DNAJC13O75165 2243 aa6.39□□□□□ -1.39
COL4A5-205ENST00000483338 PIGBOS1A0A0B4J2F0 54 aa6.39□□□□□ -1.39
COL4A5-205ENST00000483338 TMEM150CB9EJG8 249 aa6.39□□□□□ -1.39
COL4A5-205ENST00000483338 TNFRSF4P43489 277 aa6.39□□□□□ -1.39
COL4A5-205ENST00000483338 CSN1S1P47710 185 aa6.39□□□□□ -1.39
COL4A5-205ENST00000483338 SPATA46Q5T0L3 261 aa6.39□□□□□ -1.39
COL4A5-205ENST00000483338 CFAP126Q5VTH2 177 aa6.39□□□□□ -1.39
COL4A5-205ENST00000483338 FGFRL1Q8N441 504 aa6.39□□□□□ -1.39
COL4A5-205ENST00000483338 C3orf56Q8N813 242 aa6.39□□□□□ -1.39
COL4A5-205ENST00000483338 HSD17B10Q99714 261 aaKnown RBP6.39□□□□□ -1.39
COL4A5-205ENST00000483338 RAB9BQ9NP90 201 aa6.39□□□□□ -1.39
COL4A5-205ENST00000483338 DUSP13Q9UII6 198 aa6.39□□□□□ -1.39
COL4A5-205ENST00000483338 RIF1Q5UIP0 2472 aaKnown RBP6.39□□□□□ -1.39
COL4A5-205ENST00000483338 EP300Q09472 2414 aaPredicted RBP6.39□□□□□ -1.39
COL4A5-205ENST00000483338 LINC01548A6NM66 108 aa6.39□□□□□ -1.39
COL4A5-205ENST00000483338 LTAP01374 205 aa6.39□□□□□ -1.39
COL4A5-205ENST00000483338 B4GALT1P15291 398 aa6.39□□□□□ -1.39
COL4A5-205ENST00000483338 SPINK9Q5DT21 86 aa6.39□□□□□ -1.39
COL4A5-205ENST00000483338 FAM214BQ7L5A3 538 aa6.39□□□□□ -1.39
COL4A5-205ENST00000483338 MAP1LC3AQ9H492 121 aa6.39□□□□□ -1.39
COL4A5-205ENST00000483338 CLPSP04118 112 aa6.38□□□□□ -1.39
COL4A5-205ENST00000483338 GLRXP35754 106 aa6.38□□□□□ -1.39
COL4A5-205ENST00000483338 MRPS21P82921 87 aaKnown RBP6.38□□□□□ -1.39
COL4A5-205ENST00000483338 TMEM196Q5HYL7 178 aa6.38□□□□□ -1.39
COL4A5-205ENST00000483338 C1orf162Q8NEQ5 155 aaPredicted RBP6.38□□□□□ -1.39
COL4A5-205ENST00000483338 CITED2Q99967 270 aaPredicted RBP6.38□□□□□ -1.39
COL4A5-205ENST00000483338 TMEM8BA6NDV4 472 aa6.38□□□□□ -1.39
COL4A5-205ENST00000483338 NPIPB6E9PJ23 425 aa6.38□□□□□ -1.39
COL4A5-205ENST00000483338 FCN3O75636 299 aa6.38□□□□□ -1.39
COL4A5-205ENST00000483338 IFITM1P13164 125 aa6.38□□□□□ -1.39
COL4A5-205ENST00000483338 MEOX1P50221 254 aa6.38□□□□□ -1.39
COL4A5-205ENST00000483338 TMEM78Q5T7P6 136 aa6.38□□□□□ -1.39
COL4A5-205ENST00000483338 MBNL2Q5VZF2 373 aaKnown RBP6.38□□□□□ -1.39
COL4A5-205ENST00000483338 FAM169BQ8N8A8 192 aa6.38□□□□□ -1.39
COL4A5-205ENST00000483338 C5orf49A4QMS7 147 aa6.38□□□□□ -1.39
COL4A5-205ENST00000483338 GAGE2BQ13066 116 aa6.38□□□□□ -1.39
COL4A5-205ENST00000483338 RSPO1Q2MKA7 263 aaPredicted RBP6.38□□□□□ -1.39
COL4A5-205ENST00000483338 GAGE2EQ4V326 116 aa6.38□□□□□ -1.39
COL4A5-205ENST00000483338 TREML4Q6UXN2 200 aa6.38□□□□□ -1.39
COL4A5-205ENST00000483338 Q6ZSR3 168 aa6.38□□□□□ -1.39
COL4A5-205ENST00000483338 FLVCR1-AS1Q8TAF5 88 aa6.38□□□□□ -1.39
COL4A5-205ENST00000483338 MGST2Q99735 147 aa6.38□□□□□ -1.39
COL4A5-205ENST00000483338 TTTY13Q9BZ97 58 aa6.38□□□□□ -1.39
COL4A5-205ENST00000483338 GAGE2DQ9UEU5 116 aa6.38□□□□□ -1.39
COL4A5-205ENST00000483338 CACNA1EQ15878 2313 aa6.38□□□□□ -1.39
COL4A5-205ENST00000483338 GPR179Q6PRD1 2367 aa6.37□□□□□ -1.39
COL4A5-205ENST00000483338 TRAV4A0A0B4J268 109 aa6.37□□□□□ -1.39
COL4A5-205ENST00000483338 IGHV3-20A0A0C4DH32 117 aa6.37□□□□□ -1.39
COL4A5-205ENST00000483338 LOC107984640A0A0U1RRK4 108 aa6.37□□□□□ -1.39
COL4A5-205ENST00000483338 CSN3P07498 182 aa6.37□□□□□ -1.39
COL4A5-205ENST00000483338 CXCL12P48061 93 aa6.37□□□□□ -1.39
COL4A5-205ENST00000483338 EFNB3Q15768 340 aa6.37□□□□□ -1.39
COL4A5-205ENST00000483338 FOXL2NBQ6ZUU3 175 aa6.37□□□□□ -1.39
COL4A5-205ENST00000483338 ATP5L2Q7Z4Y8 100 aa6.37□□□□□ -1.39
COL4A5-205ENST00000483338 ABHD12Q8N2K0 398 aa6.37□□□□□ -1.39
COL4A5-205ENST00000483338 CHAC1Q9BUX1 264 aa6.37□□□□□ -1.39
COL4A5-205ENST00000483338 DLL3Q9NYJ7 618 aa6.37□□□□□ -1.39
COL4A5-205ENST00000483338 HSPB6O14558 160 aa6.37□□□□□ -1.39
COL4A5-205ENST00000483338 Q6ZS92 163 aa6.37□□□□□ -1.39
COL4A5-205ENST00000483338 BORCS8Q96FH0 119 aa6.37□□□□□ -1.39
COL4A5-205ENST00000483338 TPPP3Q9BW30 176 aa6.37□□□□□ -1.39
COL4A5-205ENST00000483338 SPRY4Q9C004 299 aa6.37□□□□□ -1.39
COL4A5-205ENST00000483338 SPTBN2O15020 2390 aa6.37□□□□□ -1.39
COL4A5-205ENST00000483338 C15orf62A8K5M9 175 aa6.37□□□□□ -1.39
COL4A5-205ENST00000483338 GGTLC3B5MD39 225 aa6.37□□□□□ -1.39
COL4A5-205ENST00000483338 HBBP68871 147 aa6.37□□□□□ -1.39
COL4A5-205ENST00000483338 TTC32Q5I0X7 151 aa6.37□□□□□ -1.39
COL4A5-205ENST00000483338 C16orf47Q6ZP98 133 aaPredicted RBP6.37□□□□□ -1.39
COL4A5-205ENST00000483338 CEND1Q8N111 149 aa6.37□□□□□ -1.39
COL4A5-205ENST00000483338 OR8A1Q8NGG7 326 aa6.37□□□□□ -1.39
COL4A5-205ENST00000483338 SLC37A2Q8TED4 501 aa6.37□□□□□ -1.39
COL4A5-205ENST00000483338 SSMEM1Q8WWF3 244 aa6.37□□□□□ -1.39
COL4A5-205ENST00000483338 RASL10AQ92737 203 aa6.37□□□□□ -1.39
COL4A5-205ENST00000483338 RPEQ96AT9 228 aa6.37□□□□□ -1.39
COL4A5-205ENST00000483338 DNAJC30Q96LL9 226 aa6.37□□□□□ -1.39
COL4A5-205ENST00000483338 ALKBH4Q9NXW9 302 aa6.37□□□□□ -1.39
COL4A5-205ENST00000483338 HIGD1BQ9P298 99 aa6.37□□□□□ -1.39
COL4A5-205ENST00000483338 ONECUT1Q9UBC0 465 aa6.37□□□□□ -1.39
COL4A5-205ENST00000483338 NPIPB13A6NJU9 1138 aa6.36□□□□□ -1.39
COL4A5-205ENST00000483338 NPIPB4C9JG80 1138 aa6.36□□□□□ -1.39
COL4A5-205ENST00000483338 CRLF1O75462 422 aa6.36□□□□□ -1.39
COL4A5-205ENST00000483338 LINC00694P0DN24 101 aa6.36□□□□□ -1.39
COL4A5-205ENST00000483338 MYOD1P15172 320 aa6.36□□□□□ -1.39
COL4A5-205ENST00000483338 ERVK11-1P61568 191 aa6.36□□□□□ -1.39
COL4A5-205ENST00000483338 C20orf204Q6ZNR8 217 aa6.36□□□□□ -1.39
COL4A5-205ENST00000483338 PPDPFLQ8WWR9 84 aa6.36□□□□□ -1.39
COL4A5-205ENST00000483338 LINC00479Q96M42 142 aa6.36□□□□□ -1.39
COL4A5-205ENST00000483338 HEYLQ9NQ87 328 aaPredicted RBP6.36□□□□□ -1.39
COL4A5-205ENST00000483338 PTPRBP23467 1997 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms