RNA–Protein interactions for RNA: ENST00000476784.5

TTC3-215, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2

Gene TTC3, Length 7,425 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-215ENST00000476784 GTSF1Q8WW33 167 aa5.54□□□□□ -1.52
TTC3-215ENST00000476784 LSM4Q9Y4Z0 139 aaKnown RBP5.54□□□□□ -1.52
TTC3-215ENST00000476784 USP54Q70EL1 1684 aa5.54□□□□□ -1.52
TTC3-215ENST00000476784 TRBV7-1A0A0A6YYK4 115 aa5.54□□□□□ -1.52
TTC3-215ENST00000476784 CD5LO43866 347 aa5.54□□□□□ -1.52
TTC3-215ENST00000476784 NGFRP08138 427 aa5.54□□□□□ -1.52
TTC3-215ENST00000476784 SNRPEP62304 92 aaKnown RBP5.54□□□□□ -1.52
TTC3-215ENST00000476784 KLF17Q5JT82 389 aaPredicted RBP5.54□□□□□ -1.52
TTC3-215ENST00000476784 TMEM222Q9H0R3 208 aa5.54□□□□□ -1.52
TTC3-215ENST00000476784 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.54□□□□□ -1.52
TTC3-215ENST00000476784 GCHFRP30047 84 aa5.54□□□□□ -1.52
TTC3-215ENST00000476784 SAXO1Q8IYX7 474 aa5.54□□□□□ -1.52
TTC3-215ENST00000476784 SIGLEC1Q9BZZ2 1709 aa5.54□□□□□ -1.52
TTC3-215ENST00000476784 A0A087WWL8 130 aa5.54□□□□□ -1.52
TTC3-215ENST00000476784 PRSS29PA6NIE9 313 aa5.54□□□□□ -1.52
TTC3-215ENST00000476784 C17orf98A8MV24 154 aa5.54□□□□□ -1.52
TTC3-215ENST00000476784 CRLF1O75462 422 aa5.54□□□□□ -1.52
TTC3-215ENST00000476784 FOLR2P14207 255 aa5.54□□□□□ -1.52
TTC3-215ENST00000476784 MINOS1Q5TGZ0 78 aa5.54□□□□□ -1.52
TTC3-215ENST00000476784 RASL10AQ92737 203 aa5.54□□□□□ -1.52
TTC3-215ENST00000476784 USMG5Q96IX5 58 aa5.54□□□□□ -1.52
TTC3-215ENST00000476784 RARRES2Q99969 163 aa5.54□□□□□ -1.52
TTC3-215ENST00000476784 MINOS1-NBL1R4GNA1 71 aa5.54□□□□□ -1.52
TTC3-215ENST00000476784 NPIPB13A6NJU9 1138 aa5.53□□□□□ -1.52
TTC3-215ENST00000476784 NPIPB5A8MRT5 1133 aa5.53□□□□□ -1.52
TTC3-215ENST00000476784 M0R2P5 195 aa5.53□□□□□ -1.52
TTC3-215ENST00000476784 ITGB1BP1O14713 200 aa5.53□□□□□ -1.52
TTC3-215ENST00000476784 IL18BPO95998 194 aa5.53□□□□□ -1.52
TTC3-215ENST00000476784 ESDP10768 282 aa5.53□□□□□ -1.52
TTC3-215ENST00000476784 UBE2AP49459 152 aa5.53□□□□□ -1.52
TTC3-215ENST00000476784 Q6ZQT7 251 aa5.53□□□□□ -1.52
TTC3-215ENST00000476784 PINLYPA6NC86 204 aa5.53□□□□□ -1.52
TTC3-215ENST00000476784 IQCF6A8MYZ5 107 aa5.53□□□□□ -1.52
TTC3-215ENST00000476784 SCAND1P57086 179 aa5.53□□□□□ -1.52
TTC3-215ENST00000476784 SERF2P84101 59 aa5.53□□□□□ -1.52
TTC3-215ENST00000476784 TMEM200BQ69YZ2 307 aa5.53□□□□□ -1.52
TTC3-215ENST00000476784 ZNF562Q6V9R5 426 aa5.53□□□□□ -1.52
TTC3-215ENST00000476784 TEX43Q6ZNM6 134 aa5.53□□□□□ -1.52
TTC3-215ENST00000476784 RNF138Q8WVD3 245 aa5.53□□□□□ -1.52
TTC3-215ENST00000476784 FMC1Q96HJ9 113 aa5.53□□□□□ -1.52
TTC3-215ENST00000476784 ARID1AO14497 2285 aa5.53□□□□□ -1.52
TTC3-215ENST00000476784 ADAMTS7Q9UKP4 1686 aa5.53□□□□□ -1.52
TTC3-215ENST00000476784 FANCMQ8IYD8 2048 aa5.53□□□□□ -1.52
TTC3-215ENST00000476784 ID3Q02535 119 aa5.53□□□□□ -1.52
TTC3-215ENST00000476784 SPINK13Q1W4C9 94 aa5.53□□□□□ -1.52
TTC3-215ENST00000476784 IGFL4Q6B9Z1 124 aa5.53□□□□□ -1.52
TTC3-215ENST00000476784 PVRIGQ6DKI7 326 aa5.53□□□□□ -1.52
TTC3-215ENST00000476784 GATAD1Q8WUU5 269 aa5.53□□□□□ -1.52
TTC3-215ENST00000476784 HIST1H2BAQ96A08 127 aa5.53□□□□□ -1.52
TTC3-215ENST00000476784 ESM1Q9NQ30 184 aa5.53□□□□□ -1.52
TTC3-215ENST00000476784 HEATR1Q9H583 2144 aaKnown RBP5.53□□□□□ -1.52
TTC3-215ENST00000476784 CACNA1EQ15878 2313 aa5.53□□□□□ -1.52
TTC3-215ENST00000476784 TRBV25-1A0A075B6N4 114 aa5.53□□□□□ -1.52
TTC3-215ENST00000476784 LINC00587B1AMM8 73 aa5.53□□□□□ -1.52
TTC3-215ENST00000476784 SELLP14151 372 aa5.53□□□□□ -1.52
TTC3-215ENST00000476784 LIMS1P48059 325 aa5.53□□□□□ -1.52
TTC3-215ENST00000476784 PKIAP61925 76 aa5.53□□□□□ -1.52
TTC3-215ENST00000476784 UBE2V2Q15819 145 aa5.53□□□□□ -1.52
TTC3-215ENST00000476784 UQCC3Q6UW78 93 aa5.53□□□□□ -1.52
TTC3-215ENST00000476784 PLXNB2O15031 1838 aa5.53□□□□□ -1.52
TTC3-215ENST00000476784 A0A1B0GUT8 65 aa5.53□□□□□ -1.52
TTC3-215ENST00000476784 CHKB-CPT1BH3BT56 60 aa5.53□□□□□ -1.52
TTC3-215ENST00000476784 BCL2P10415 239 aa5.53□□□□□ -1.52
TTC3-215ENST00000476784 TCTEX1D4Q5JR98 221 aa5.53□□□□□ -1.52
TTC3-215ENST00000476784 PIKFYVEQ9Y2I7 2098 aa5.53□□□□□ -1.52
TTC3-215ENST00000476784 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.53□□□□□ -1.52
TTC3-215ENST00000476784 TMEM174Q8WUU8 243 aa5.53□□□□□ -1.52
TTC3-215ENST00000476784 RPP21Q9H633 154 aaKnown RBP5.53□□□□□ -1.52
TTC3-215ENST00000476784 TMEM178BH3BS89 294 aa5.52□□□□□ -1.53
TTC3-215ENST00000476784 IGKV1-5P01602 117 aa5.52□□□□□ -1.53
TTC3-215ENST00000476784 IGHV3-30P01768 117 aa5.52□□□□□ -1.53
TTC3-215ENST00000476784 IGHV3-33P01772 117 aa5.52□□□□□ -1.53
TTC3-215ENST00000476784 IGHV3-30-3P0DP02 117 aa5.52□□□□□ -1.53
TTC3-215ENST00000476784 IGHV3-30-5P0DP03 117 aa5.52□□□□□ -1.53
TTC3-215ENST00000476784 GALP22466 123 aa5.52□□□□□ -1.53
TTC3-215ENST00000476784 DMKNQ6E0U4 476 aaPredicted RBP5.52□□□□□ -1.53
TTC3-215ENST00000476784 H1FOOQ8IZA3 346 aaPredicted RBP5.52□□□□□ -1.53
TTC3-215ENST00000476784 LINC00518Q8N0U6 118 aa5.52□□□□□ -1.53
TTC3-215ENST00000476784 NRGNQ92686 78 aa5.52□□□□□ -1.53
TTC3-215ENST00000476784 KLK9Q9UKQ9 250 aa5.52□□□□□ -1.53
TTC3-215ENST00000476784 MMP23AO75900 390 aa5.52□□□□□ -1.53
TTC3-215ENST00000476784 DKK1O94907 266 aa5.52□□□□□ -1.53
TTC3-215ENST00000476784 SRSF1Q07955 248 aaKnown RBP eCLIP5.52□□□□□ -1.53
TTC3-215ENST00000476784 ORMDL2Q53FV1 153 aa5.52□□□□□ -1.53
TTC3-215ENST00000476784 CHTOPQ9Y3Y2 248 aaKnown RBP5.52□□□□□ -1.53
TTC3-215ENST00000476784 ATRXP46100 2492 aa5.52□□□□□ -1.53
TTC3-215ENST00000476784 CCL24O00175 119 aa5.52□□□□□ -1.53
TTC3-215ENST00000476784 C9orf153Q5TBE3 101 aa5.52□□□□□ -1.53
TTC3-215ENST00000476784 C1orf43Q9BWL3 253 aa5.52□□□□□ -1.53
TTC3-215ENST00000476784 ABCA1O95477 2261 aa5.52□□□□□ -1.53
TTC3-215ENST00000476784 IGHV4-4A0A075B6R2 117 aa5.52□□□□□ -1.53
TTC3-215ENST00000476784 TRAV8-2A0A0B4J237 113 aa5.52□□□□□ -1.53
TTC3-215ENST00000476784 IGHV1-3A0A0C4DH29 117 aa5.52□□□□□ -1.53
TTC3-215ENST00000476784 LY6G6CO95867 125 aa5.52□□□□□ -1.53
TTC3-215ENST00000476784 GP9P14770 177 aa5.52□□□□□ -1.53
TTC3-215ENST00000476784 PKIGQ9Y2B9 76 aa5.52□□□□□ -1.53
TTC3-215ENST00000476784 LAMB4A4D0S4 1761 aa5.52□□□□□ -1.53
TTC3-215ENST00000476784 SCN8AQ9UQD0 1980 aa5.52□□□□□ -1.53
TTC3-215ENST00000476784 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.52□□□□□ -1.532e-6■■■■■ 28.9
TTC3-215ENST00000476784 IGKV1-8A0A0C4DH67 115 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms