RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 CORTO00230 105 aa7.99□□□□□ -1.13
BRCA1-213ENST00000476777 HNRNPCP07910 306 aaKnown RBP eCLIP7.99□□□□□ -1.13
BRCA1-213ENST00000476777 SDC2P34741 201 aa7.99□□□□□ -1.13
BRCA1-213ENST00000476777 OPRK1P41145 380 aa7.99□□□□□ -1.13
BRCA1-213ENST00000476777 NKX2-1P43699 371 aaPredicted RBP7.99□□□□□ -1.13
BRCA1-213ENST00000476777 RPL5P46777 297 aaKnown RBP7.99□□□□□ -1.13
BRCA1-213ENST00000476777 DEFB1P60022 68 aa7.99□□□□□ -1.13
BRCA1-213ENST00000476777 KRTAP10-2P60368 255 aa7.99□□□□□ -1.13
BRCA1-213ENST00000476777 TBC1D26Q86UD7 250 aa7.99□□□□□ -1.13
BRCA1-213ENST00000476777 ZNF709Q8N972 641 aa7.99□□□□□ -1.13
BRCA1-213ENST00000476777 TRAV30A0A087WSZ9 112 aa7.98□□□□□ -1.13
BRCA1-213ENST00000476777 A0A0B4J293 547 aa7.98□□□□□ -1.13
BRCA1-213ENST00000476777 LOC102723971A0A1B0GUV8 181 aa7.98□□□□□ -1.13
BRCA1-213ENST00000476777 EPM2AB3EWF7 344 aa7.98□□□□□ -1.13
BRCA1-213ENST00000476777 SCGB2A1O75556 95 aa7.98□□□□□ -1.13
BRCA1-213ENST00000476777 IGKV3-20P01619 116 aa7.98□□□□□ -1.13
BRCA1-213ENST00000476777 CLEC2LP0C7M8 214 aa7.98□□□□□ -1.13
BRCA1-213ENST00000476777 SUB1P53999 127 aaKnown RBP eCLIP7.98□□□□□ -1.13
BRCA1-213ENST00000476777 TAS2R46P59540 309 aa7.98□□□□□ -1.13
BRCA1-213ENST00000476777 DAD1P61803 113 aa7.98□□□□□ -1.13
BRCA1-213ENST00000476777 IDNKQ5T6J7 187 aa7.98□□□□□ -1.13
BRCA1-213ENST00000476777 SLC35G3Q8N808 338 aa7.98□□□□□ -1.13
BRCA1-213ENST00000476777 OR5H2Q8NGV7 314 aa7.98□□□□□ -1.13
BRCA1-213ENST00000476777 OR6F1Q8NGZ6 308 aa7.98□□□□□ -1.13
BRCA1-213ENST00000476777 EBAG9O00559 213 aa7.97□□□□□ -1.13
BRCA1-213ENST00000476777 BUB3O43684 328 aa7.97□□□□□ -1.13
BRCA1-213ENST00000476777 IGKV1-5P01602 117 aa7.97□□□□□ -1.13
BRCA1-213ENST00000476777 HBE1P02100 147 aa7.97□□□□□ -1.13
BRCA1-213ENST00000476777 P0C879 139 aa7.97□□□□□ -1.13
BRCA1-213ENST00000476777 IGLC1P0CG04 106 aa7.97□□□□□ -1.13
BRCA1-213ENST00000476777 INAFM2P0DMQ5 153 aa7.97□□□□□ -1.13
BRCA1-213ENST00000476777 NAT1P18440 290 aa7.97□□□□□ -1.13
BRCA1-213ENST00000476777 S100GP29377 79 aa7.97□□□□□ -1.13
BRCA1-213ENST00000476777 HOXA1P49639 335 aaPredicted RBP7.97□□□□□ -1.13
BRCA1-213ENST00000476777 MXD1Q05195 221 aa7.97□□□□□ -1.13
BRCA1-213ENST00000476777 USF2Q15853 346 aaPredicted RBP7.97□□□□□ -1.13
BRCA1-213ENST00000476777 GSG1LQ6UXU4 331 aa7.97□□□□□ -1.13
BRCA1-213ENST00000476777 SIGLEC15Q6ZMC9 328 aa7.97□□□□□ -1.13
BRCA1-213ENST00000476777 C1orf158Q8N1D5 194 aa7.97□□□□□ -1.13
BRCA1-213ENST00000476777 NRG4Q8WWG1 115 aa7.97□□□□□ -1.13
BRCA1-213ENST00000476777 CLUHP3Q96NS8 147 aa7.97□□□□□ -1.13
BRCA1-213ENST00000476777 SAV1Q9H4B6 383 aaPredicted RBP7.97□□□□□ -1.13
BRCA1-213ENST00000476777 HRH1P35367 487 aa7.96□□□□□ -1.14
BRCA1-213ENST00000476777 ETV6P41212 452 aa7.96□□□□□ -1.14
BRCA1-213ENST00000476777 ALDH3B2P48448 385 aa7.96□□□□□ -1.14
BRCA1-213ENST00000476777 YPEL3P61236 119 aaPredicted RBP7.96□□□□□ -1.14
BRCA1-213ENST00000476777 DHODHQ02127 395 aa7.96□□□□□ -1.14
BRCA1-213ENST00000476777 BSXQ3C1V8 233 aa7.96□□□□□ -1.14
BRCA1-213ENST00000476777 LPCAT3Q6P1A2 487 aa7.96□□□□□ -1.14
BRCA1-213ENST00000476777 PRSS54Q6PEW0 395 aa7.96□□□□□ -1.14
BRCA1-213ENST00000476777 FOXI2Q6ZQN5 318 aa7.96□□□□□ -1.14
BRCA1-213ENST00000476777 LYSMD2Q8IV50 215 aa7.96□□□□□ -1.14
BRCA1-213ENST00000476777 OR1S2Q8NGQ3 325 aa7.96□□□□□ -1.14
BRCA1-213ENST00000476777 Q8WTZ3 238 aa7.96□□□□□ -1.14
BRCA1-213ENST00000476777 SLC35B3Q9H1N7 401 aa7.96□□□□□ -1.14
BRCA1-213ENST00000476777 SSR3Q9UNL2 185 aa7.96□□□□□ -1.14
BRCA1-213ENST00000476777 GOLT1BQ9Y3E0 138 aa7.96□□□□□ -1.14
BRCA1-213ENST00000476777 LINC00588Q9Y4M8 146 aa7.96□□□□□ -1.14
BRCA1-213ENST00000476777 IL4P05112 153 aa7.95□□□□□ -1.14
BRCA1-213ENST00000476777 HLA-DMAP28067 261 aa7.95□□□□□ -1.14
BRCA1-213ENST00000476777 OR10J1P30954 320 aa7.95□□□□□ -1.14
BRCA1-213ENST00000476777 TAS2R20P59543 309 aa7.95□□□□□ -1.14
BRCA1-213ENST00000476777 ZNF79Q15937 498 aa7.95□□□□□ -1.14
BRCA1-213ENST00000476777 RRN3P1Q2M238 152 aa7.95□□□□□ -1.14
BRCA1-213ENST00000476777 OR4B1Q8NGF8 309 aa7.95□□□□□ -1.14
BRCA1-213ENST00000476777 LINC00052Q96N35 136 aa7.95□□□□□ -1.14
BRCA1-213ENST00000476777 C7orf50Q9BRJ6 194 aaKnown RBP7.95□□□□□ -1.14
BRCA1-213ENST00000476777 WDR12Q9GZL7 423 aaKnown RBP7.95□□□□□ -1.14
BRCA1-213ENST00000476777 BLOC1S6Q9UL45 172 aa7.95□□□□□ -1.14
BRCA1-213ENST00000476777 RPS10-NUDT3A0A1W2PQS6 291 aa7.94□□□□□ -1.14
BRCA1-213ENST00000476777 GSTZ1O43708 216 aaPredicted RBP7.94□□□□□ -1.14
BRCA1-213ENST00000476777 NUDT3O95989 172 aa7.94□□□□□ -1.14
BRCA1-213ENST00000476777 PSMB9P28065 219 aa7.94□□□□□ -1.14
BRCA1-213ENST00000476777 RND2P52198 227 aa7.94□□□□□ -1.14
BRCA1-213ENST00000476777 CCL18P55774 89 aa7.94□□□□□ -1.14
BRCA1-213ENST00000476777 PSG9Q00887 426 aa7.94□□□□□ -1.14
BRCA1-213ENST00000476777 PDCD10Q9BUL8 212 aa7.94□□□□□ -1.14
BRCA1-213ENST00000476777 KRTAP1-5Q9BYS1 174 aa7.94□□□□□ -1.14
BRCA1-213ENST00000476777 ENY2Q9NPA8 101 aa7.94□□□□□ -1.14
BRCA1-213ENST00000476777 SOCS3O14543 225 aa7.93□□□□□ -1.14
BRCA1-213ENST00000476777 BTF3P20290 206 aaKnown RBP7.93□□□□□ -1.14
BRCA1-213ENST00000476777 HSPA13P48723 471 aa7.93□□□□□ -1.14
BRCA1-213ENST00000476777 RORCP51449 518 aa7.93□□□□□ -1.14
BRCA1-213ENST00000476777 AKR1C2P52895 323 aa7.93□□□□□ -1.14
BRCA1-213ENST00000476777 UCP3P55916 312 aa7.93□□□□□ -1.14
BRCA1-213ENST00000476777 TSPAN5P62079 268 aa7.93□□□□□ -1.14
BRCA1-213ENST00000476777 FAM78BQ5VT40 261 aa7.93□□□□□ -1.14
BRCA1-213ENST00000476777 S100A16Q96FQ6 103 aaKnown RBP7.93□□□□□ -1.14
BRCA1-213ENST00000476777 Q9H8V8 135 aa7.93□□□□□ -1.14
BRCA1-213ENST00000476777 SCPEP1Q9HB40 452 aa7.93□□□□□ -1.14
BRCA1-213ENST00000476777 KLK11Q9UBX7 282 aa7.93□□□□□ -1.14
BRCA1-213ENST00000476777 LYRM9A8MSI8 78 aa7.92□□□□□ -1.14
BRCA1-213ENST00000476777 F5H768 121 aa7.92□□□□□ -1.14
BRCA1-213ENST00000476777 F6UB75 175 aa7.92□□□□□ -1.14
BRCA1-213ENST00000476777 NXPH3O95157 252 aa7.92□□□□□ -1.14
BRCA1-213ENST00000476777 TOMM40O96008 361 aa7.92□□□□□ -1.14
BRCA1-213ENST00000476777 PRM2P04554 102 aa7.92□□□□□ -1.14
BRCA1-213ENST00000476777 RD3LP0DJH9 198 aa7.92□□□□□ -1.14
BRCA1-213ENST00000476777 SLC25A4P12235 298 aa7.92□□□□□ -1.14
BRCA1-213ENST00000476777 ID1P41134 155 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms