RNA–Protein interactions for RNA: ENST00000468385.1

PTPN7-207, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-207ENST00000468385 SPCS2Q15005 226 aa9.37□□□□□ -0.91
PTPN7-207ENST00000468385 TIGITQ495A1 244 aa9.37□□□□□ -0.91
PTPN7-207ENST00000468385 PSMG4Q5JS54 123 aa9.37□□□□□ -0.91
PTPN7-207ENST00000468385 CROCCP3Q8IVE0 287 aa9.37□□□□□ -0.91
PTPN7-207ENST00000468385 TMEM230Q96A57 120 aa9.37□□□□□ -0.91
PTPN7-207ENST00000468385 TMEM238LA0A1B0GVL6 79 aa9.36□□□□□ -0.91
PTPN7-207ENST00000468385 IFNA17P01571 189 aa9.36□□□□□ -0.91
PTPN7-207ENST00000468385 RPS19P39019 145 aaKnown RBP9.36□□□□□ -0.91
PTPN7-207ENST00000468385 OPRK1P41145 380 aa9.36□□□□□ -0.91
PTPN7-207ENST00000468385 ETV6P41212 452 aa9.36□□□□□ -0.91
PTPN7-207ENST00000468385 SUB1P53999 127 aaKnown RBP eCLIP9.36□□□□□ -0.91
PTPN7-207ENST00000468385 C16orf54Q6UWD8 224 aa9.36□□□□□ -0.91
PTPN7-207ENST00000468385 Q6ZR54 194 aa9.36□□□□□ -0.91
PTPN7-207ENST00000468385 GLMPQ8WWB7 406 aa9.36□□□□□ -0.91
PTPN7-207ENST00000468385 NARS2Q96I59 477 aaKnown RBP9.36□□□□□ -0.91
PTPN7-207ENST00000468385 HELTA6NFD8 242 aa9.35□□□□□ -0.91
PTPN7-207ENST00000468385 CD74P04233 296 aa9.35□□□□□ -0.91
PTPN7-207ENST00000468385 NPY1RP25929 384 aa9.35□□□□□ -0.91
PTPN7-207ENST00000468385 HOXA1P49639 335 aaPredicted RBP9.35□□□□□ -0.91
PTPN7-207ENST00000468385 RND3P61587 244 aa9.35□□□□□ -0.91
PTPN7-207ENST00000468385 NCS1P62166 190 aa9.35□□□□□ -0.91
PTPN7-207ENST00000468385 BSXQ3C1V8 233 aa9.35□□□□□ -0.91
PTPN7-207ENST00000468385 ZNF575Q86XF7 245 aa9.35□□□□□ -0.91
PTPN7-207ENST00000468385 TP53RKQ96S44 253 aa9.35□□□□□ -0.91
PTPN7-207ENST00000468385 C1QTNF4Q9BXJ3 329 aa9.35□□□□□ -0.91
PTPN7-207ENST00000468385 XCL2Q9UBD3 114 aa9.35□□□□□ -0.91
PTPN7-207ENST00000468385 IGLV2-18A0A075B6J9 118 aa9.34□□□□□ -0.91
PTPN7-207ENST00000468385 TRAV30A0A087WSZ9 112 aa9.34□□□□□ -0.91
PTPN7-207ENST00000468385 FAM90A26D6RGX4 464 aa9.34□□□□□ -0.91
PTPN7-207ENST00000468385 H3BMM0 161 aa9.34□□□□□ -0.91
PTPN7-207ENST00000468385 SCGB2A1O75556 95 aa9.34□□□□□ -0.91
PTPN7-207ENST00000468385 IFNA10P01566 189 aa9.34□□□□□ -0.91
PTPN7-207ENST00000468385 HNRNPCP07910 306 aaKnown RBP eCLIP9.34□□□□□ -0.91
PTPN7-207ENST00000468385 EIF2B2P49770 351 aaKnown RBP9.34□□□□□ -0.91
PTPN7-207ENST00000468385 AKR1C2P52895 323 aa9.34□□□□□ -0.91
PTPN7-207ENST00000468385 AP2S1P53680 142 aaPredicted RBP9.34□□□□□ -0.91
PTPN7-207ENST00000468385 NUTF2P61970 127 aaKnown RBP9.34□□□□□ -0.91
PTPN7-207ENST00000468385 ZNF705AQ6ZN79 300 aaPredicted RBP9.34□□□□□ -0.91
PTPN7-207ENST00000468385 Q6ZRM9 215 aa9.34□□□□□ -0.91
PTPN7-207ENST00000468385 NEU1Q99519 415 aa9.34□□□□□ -0.91
PTPN7-207ENST00000468385 PDCD10Q9BUL8 212 aa9.34□□□□□ -0.91
PTPN7-207ENST00000468385 APOBP04114 4563 aaKnown RBP9.33□□□□□ -0.92
PTPN7-207ENST00000468385 DNAH5Q8TE73 4624 aa9.33□□□□□ -0.92
PTPN7-207ENST00000468385 A0A0G2JRQ6 117 aa9.33□□□□□ -0.92
PTPN7-207ENST00000468385 M0QYG6 137 aa9.33□□□□□ -0.92
PTPN7-207ENST00000468385 IGLC1P0CG04 106 aa9.33□□□□□ -0.92
PTPN7-207ENST00000468385 SPART-AS1P0CW21 52 aa9.33□□□□□ -0.92
PTPN7-207ENST00000468385 PI3P19957 117 aa9.33□□□□□ -0.92
PTPN7-207ENST00000468385 RCVRNP35243 200 aa9.33□□□□□ -0.92
PTPN7-207ENST00000468385 PIGPP57054 158 aa9.33□□□□□ -0.92
PTPN7-207ENST00000468385 LINC00299Q6ZSB3 139 aa9.33□□□□□ -0.92
PTPN7-207ENST00000468385 LHFPL1Q86WI0 220 aa9.33□□□□□ -0.92
PTPN7-207ENST00000468385 OR1S2Q8NGQ3 325 aa9.33□□□□□ -0.92
PTPN7-207ENST00000468385 DYNC2LI1Q8TCX1 351 aa9.33□□□□□ -0.92
PTPN7-207ENST00000468385 ZNF486Q96H40 463 aaPredicted RBP9.33□□□□□ -0.92
PTPN7-207ENST00000468385 SCPEP1Q9HB40 452 aa9.33□□□□□ -0.92
PTPN7-207ENST00000468385 SEPSECSQ9HD40 501 aaKnown RBP9.33□□□□□ -0.92
PTPN7-207ENST00000468385 ENY2Q9NPA8 101 aa9.33□□□□□ -0.92
PTPN7-207ENST00000468385 ZNF705FA8MVS1 300 aaPredicted RBP9.32□□□□□ -0.92
PTPN7-207ENST00000468385 IFNA21P01568 189 aa9.32□□□□□ -0.92
PTPN7-207ENST00000468385 ZNF705DP0CH99 300 aaPredicted RBP9.32□□□□□ -0.92
PTPN7-207ENST00000468385 ZNF705BP0CI00 300 aaPredicted RBP9.32□□□□□ -0.92
PTPN7-207ENST00000468385 HLA-DRB4P13762 266 aa9.32□□□□□ -0.92
PTPN7-207ENST00000468385 PGAM2P15259 253 aa9.32□□□□□ -0.92
PTPN7-207ENST00000468385 SNRPD3P62318 126 aaKnown RBP9.32□□□□□ -0.92
PTPN7-207ENST00000468385 DHODHQ02127 395 aa9.32□□□□□ -0.92
PTPN7-207ENST00000468385 USF2Q15853 346 aaPredicted RBP9.32□□□□□ -0.92
PTPN7-207ENST00000468385 PRSS54Q6PEW0 395 aa9.32□□□□□ -0.92
PTPN7-207ENST00000468385 SNX29P2Q8IUI4 249 aa9.32□□□□□ -0.92
PTPN7-207ENST00000468385 UBE2DNLQ8IWF7 75 aa9.32□□□□□ -0.92
PTPN7-207ENST00000468385 Q8WTZ3 238 aa9.32□□□□□ -0.92
PTPN7-207ENST00000468385 HLA-DRB4X5D2U9 266 aa9.32□□□□□ -0.92
PTPN7-207ENST00000468385 C3orf85A0A1B0GTC6 90 aa9.31□□□□□ -0.92
PTPN7-207ENST00000468385 RPS10-NUDT3A0A1W2PQS6 291 aa9.31□□□□□ -0.92
PTPN7-207ENST00000468385 BUB3O43684 328 aa9.31□□□□□ -0.92
PTPN7-207ENST00000468385 ATG12O94817 140 aa9.31□□□□□ -0.92
PTPN7-207ENST00000468385 RND2P52198 227 aa9.31□□□□□ -0.92
PTPN7-207ENST00000468385 EMP1P54849 157 aa9.31□□□□□ -0.92
PTPN7-207ENST00000468385 YPEL3P61236 119 aaPredicted RBP9.31□□□□□ -0.92
PTPN7-207ENST00000468385 ZNF846Q147U1 533 aa9.31□□□□□ -0.92
PTPN7-207ENST00000468385 SP6Q3SY56 376 aa9.31□□□□□ -0.92
PTPN7-207ENST00000468385 AARDQ4LEZ3 155 aa9.31□□□□□ -0.92
PTPN7-207ENST00000468385 MCFD2Q8NI22 146 aa9.31□□□□□ -0.92
PTPN7-207ENST00000468385 S100ZQ8WXG8 99 aa9.31□□□□□ -0.92
PTPN7-207ENST00000468385 FAM210BQ96KR6 192 aa9.31□□□□□ -0.92
PTPN7-207ENST00000468385 NRN1Q9NPD7 142 aa9.31□□□□□ -0.92
PTPN7-207ENST00000468385 COMMD3Q9UBI1 195 aa9.31□□□□□ -0.92
PTPN7-207ENST00000468385 TMEM189A5PLL7 270 aa9.3□□□□□ -0.92
PTPN7-207ENST00000468385 SMIM9A6NGZ8 99 aa9.3□□□□□ -0.92
PTPN7-207ENST00000468385 APOA1P02647 267 aa9.3□□□□□ -0.92
PTPN7-207ENST00000468385 IL4P05112 153 aa9.3□□□□□ -0.92
PTPN7-207ENST00000468385 UCP1P25874 307 aa9.3□□□□□ -0.92
PTPN7-207ENST00000468385 OR10J1P30954 320 aa9.3□□□□□ -0.92
PTPN7-207ENST00000468385 HTR2BP41595 481 aa9.3□□□□□ -0.92
PTPN7-207ENST00000468385 NKX2-1P43699 371 aaPredicted RBP9.3□□□□□ -0.92
PTPN7-207ENST00000468385 DEFB1P60022 68 aa9.3□□□□□ -0.92
PTPN7-207ENST00000468385 SPCS3P61009 180 aa9.3□□□□□ -0.92
PTPN7-207ENST00000468385 TRIM16LQ309B1 348 aa9.3□□□□□ -0.92
PTPN7-207ENST00000468385 GDF5OSQ5U4N7 250 aa9.3□□□□□ -0.92
PTPN7-207ENST00000468385 SIGLEC15Q6ZMC9 328 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 112.3 ms