RNA–Protein interactions for RNA: ENST00000461115.5

IFT88-204, Transcript of intraflagellar transport 88, humanhuman

TSL 2

Gene IFT88, Length 1,440 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-204ENST00000461115 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.59□□□□□ -1.03
IFT88-204ENST00000461115 OR4F5Q8NH21 305 aa8.59□□□□□ -1.03
IFT88-204ENST00000461115 C22orf15Q8WYQ4 148 aa8.59□□□□□ -1.03
IFT88-204ENST00000461115 OR4F4Q96R69 305 aa8.59□□□□□ -1.03
IFT88-204ENST00000461115 WNT10AQ9GZT5 417 aa8.59□□□□□ -1.03
IFT88-204ENST00000461115 PARLQ9H300 379 aa8.59□□□□□ -1.03
IFT88-204ENST00000461115 COL12A1Q99715 3063 aa8.58□□□□□ -1.04
IFT88-204ENST00000461115 IGHV1-69DA0A0B4J2H0 117 aa8.58□□□□□ -1.04
IFT88-204ENST00000461115 A0A1W2PRD5 423 aa8.58□□□□□ -1.04
IFT88-204ENST00000461115 A0A1W2PRF3 423 aa8.58□□□□□ -1.04
IFT88-204ENST00000461115 A0A1W2PRM7 423 aa8.58□□□□□ -1.04
IFT88-204ENST00000461115 IGHV1-69P01742 117 aa8.58□□□□□ -1.04
IFT88-204ENST00000461115 EGR2P11161 476 aaPredicted RBP8.58□□□□□ -1.04
IFT88-204ENST00000461115 TMEM11P17152 192 aa8.58□□□□□ -1.04
IFT88-204ENST00000461115 GATA3P23771 443 aa8.58□□□□□ -1.04
IFT88-204ENST00000461115 FCGR2BP31994 310 aaPredicted RBP8.58□□□□□ -1.04
IFT88-204ENST00000461115 BPIFB3P59826 476 aa8.58□□□□□ -1.04
IFT88-204ENST00000461115 GNB1P62873 340 aa8.58□□□□□ -1.04
IFT88-204ENST00000461115 TMEM241Q24JQ0 296 aa8.58□□□□□ -1.04
IFT88-204ENST00000461115 HIST1H2BAQ96A08 127 aa8.58□□□□□ -1.04
IFT88-204ENST00000461115 MISP3Q96FF7 219 aa8.58□□□□□ -1.04
IFT88-204ENST00000461115 FANCD2OSQ96PS1 177 aa8.58□□□□□ -1.04
IFT88-204ENST00000461115 SMIM7Q9BQ49 75 aa8.58□□□□□ -1.04
IFT88-204ENST00000461115 C20orf24Q9BUV8 137 aa8.58□□□□□ -1.04
IFT88-204ENST00000461115 SLC25A2Q9BXI2 301 aa8.58□□□□□ -1.04
IFT88-204ENST00000461115 CTDSP1Q9GZU7 261 aa8.58□□□□□ -1.04
IFT88-204ENST00000461115 TNFRSF19Q9NS68 423 aa8.58□□□□□ -1.04
IFT88-204ENST00000461115 TACC2O95359 2948 aa8.58□□□□□ -1.04
IFT88-204ENST00000461115 IGHV7-81A0A0B4J1V7 117 aa8.57□□□□□ -1.04
IFT88-204ENST00000461115 CNIH1O95406 144 aa8.57□□□□□ -1.04
IFT88-204ENST00000461115 ATP5G3P48201 142 aa8.57□□□□□ -1.04
IFT88-204ENST00000461115 CRIP2P52943 208 aaPredicted RBP8.57□□□□□ -1.04
IFT88-204ENST00000461115 NDPQ00604 133 aa8.57□□□□□ -1.04
IFT88-204ENST00000461115 ZNF90Q03938 601 aa8.57□□□□□ -1.04
IFT88-204ENST00000461115 HES1Q14469 280 aa8.57□□□□□ -1.04
IFT88-204ENST00000461115 C10orf113Q5VZT2 155 aa8.57□□□□□ -1.04
IFT88-204ENST00000461115 TMEM190Q8WZ59 177 aa8.57□□□□□ -1.04
IFT88-204ENST00000461115 ARPC1AQ92747 370 aa8.57□□□□□ -1.04
IFT88-204ENST00000461115 TMEM68Q96MH6 324 aa8.57□□□□□ -1.04
IFT88-204ENST00000461115 SSX3Q99909 188 aa8.57□□□□□ -1.04
IFT88-204ENST00000461115 YTHDF2Q9Y5A9 579 aaKnown RBP8.57□□□□□ -1.04
IFT88-204ENST00000461115 LY96Q9Y6Y9 160 aa8.57□□□□□ -1.04
IFT88-204ENST00000461115 C9JCJ5 164 aa8.56□□□□□ -1.04
IFT88-204ENST00000461115 IGKV1-17P01599 117 aa8.56□□□□□ -1.04
IFT88-204ENST00000461115 MSMBP08118 114 aa8.56□□□□□ -1.04
IFT88-204ENST00000461115 CD99P14209 185 aa8.56□□□□□ -1.04
IFT88-204ENST00000461115 CD24P25063 80 aa8.56□□□□□ -1.04
IFT88-204ENST00000461115 RPL23P62829 140 aaKnown RBP8.56□□□□□ -1.04
IFT88-204ENST00000461115 ZNF343Q6P1L6 599 aa8.56□□□□□ -1.04
IFT88-204ENST00000461115 C19orf35Q6ZS72 473 aa8.56□□□□□ -1.04
IFT88-204ENST00000461115 LRRC75A-AS1Q8N1F1 130 aa8.56□□□□□ -1.04
IFT88-204ENST00000461115 STXBP6Q8NFX7 210 aa8.56□□□□□ -1.04
IFT88-204ENST00000461115 SGMS2Q8NHU3 365 aa8.56□□□□□ -1.04
IFT88-204ENST00000461115 PIFOQ8TCI5 191 aa8.56□□□□□ -1.04
IFT88-204ENST00000461115 TCEAL7Q9BRU2 100 aa8.56□□□□□ -1.04
IFT88-204ENST00000461115 PTPN13Q12923 2485 aa8.56□□□□□ -1.04
IFT88-204ENST00000461115 PRRC2AP48634 2157 aaKnown RBP8.55□□□□□ -1.04
IFT88-204ENST00000461115 TRAV30A0A087WSZ9 112 aa8.55□□□□□ -1.04
IFT88-204ENST00000461115 TRAV20A0A0B4J274 112 aa8.55□□□□□ -1.04
IFT88-204ENST00000461115 B4DSR2 109 aa8.55□□□□□ -1.04
IFT88-204ENST00000461115 COX7A2P2O60397 106 aa8.55□□□□□ -1.04
IFT88-204ENST00000461115 OR2C1O95371 312 aa8.55□□□□□ -1.04
IFT88-204ENST00000461115 AKR1C3P42330 323 aa8.55□□□□□ -1.04
IFT88-204ENST00000461115 FAM120AOSQ5T036 256 aa8.55□□□□□ -1.04
IFT88-204ENST00000461115 MORN5Q5VZ52 161 aa8.55□□□□□ -1.04
IFT88-204ENST00000461115 C1QL4Q86Z23 238 aa8.55□□□□□ -1.04
IFT88-204ENST00000461115 OR51G1Q8NGK1 321 aa8.55□□□□□ -1.04
IFT88-204ENST00000461115 BEX4Q9NWD9 120 aaPredicted RBP8.55□□□□□ -1.04
IFT88-204ENST00000461115 MRPL27Q9P0M9 148 aaKnown RBP8.55□□□□□ -1.04
IFT88-204ENST00000461115 ANKRD17O75179 2603 aaKnown RBP8.55□□□□□ -1.04
IFT88-204ENST00000461115 F8W735 103 aaPredicted RBP8.54□□□□□ -1.04
IFT88-204ENST00000461115 CLDN34H7C241 214 aa8.54□□□□□ -1.04
IFT88-204ENST00000461115 BRI3O95415 125 aa8.54□□□□□ -1.04
IFT88-204ENST00000461115 CRYBA1P05813 215 aa8.54□□□□□ -1.04
IFT88-204ENST00000461115 FABP1P07148 127 aa8.54□□□□□ -1.04
IFT88-204ENST00000461115 MYCNOSP40205 109 aa8.54□□□□□ -1.04
IFT88-204ENST00000461115 CEBPGP53567 150 aa8.54□□□□□ -1.04
IFT88-204ENST00000461115 UBE2G2P60604 165 aa8.54□□□□□ -1.04
IFT88-204ENST00000461115 YPEL3P61236 119 aaPredicted RBP8.54□□□□□ -1.04
IFT88-204ENST00000461115 FLI1Q01543 452 aaPredicted RBP8.54□□□□□ -1.04
IFT88-204ENST00000461115 ELOBQ15370 118 aa8.54□□□□□ -1.04
IFT88-204ENST00000461115 C19orf54Q5BKX5 351 aa8.54□□□□□ -1.04
IFT88-204ENST00000461115 CST9LP1Q5W188 147 aa8.54□□□□□ -1.04
IFT88-204ENST00000461115 FAM110DQ8TAY7 271 aaPredicted RBP8.54□□□□□ -1.04
IFT88-204ENST00000461115 RPUSD4Q96CM3 377 aaKnown RBP8.54□□□□□ -1.04
IFT88-204ENST00000461115 FXYD5Q96DB9 178 aa8.54□□□□□ -1.04
IFT88-204ENST00000461115 ANAPC16Q96DE5 110 aa8.54□□□□□ -1.04
IFT88-204ENST00000461115 PERPQ96FX8 193 aa8.54□□□□□ -1.04
IFT88-204ENST00000461115 RBM14Q96PK6 669 aaKnown RBP8.54□□□□□ -1.04
IFT88-204ENST00000461115 UHRF2Q96PU4 802 aa8.54□□□□□ -1.04
IFT88-204ENST00000461115 TXN2Q99757 166 aa8.54□□□□□ -1.04
IFT88-204ENST00000461115 PYGO2Q9BRQ0 406 aa8.54□□□□□ -1.04
IFT88-204ENST00000461115 ZNF355PQ9NSJ1 428 aa8.54□□□□□ -1.04
IFT88-204ENST00000461115 KMT2BQ9UMN6 2715 aaPredicted RBP8.54□□□□□ -1.04
IFT88-204ENST00000461115 CR1P17927 2039 aa8.54□□□□□ -1.04
IFT88-204ENST00000461115 USP9YO00507 2555 aaPredicted RBP8.54□□□□□ -1.04
IFT88-204ENST00000461115 TRBV20OR9-2A0A075B6H5 130 aa8.54□□□□□ -1.04
IFT88-204ENST00000461115 TRBV24-1A0A075B6N3 115 aa8.54□□□□□ -1.04
IFT88-204ENST00000461115 TRBV9A0A0B4J1U6 114 aa8.54□□□□□ -1.04
IFT88-204ENST00000461115 NCBP2LA6PVI3 153 aaKnown RBP8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms