RNA–Protein interactions for RNA: ENST00000453705.1

BRCC3-208, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 5

Gene BRCC3, Length 2,694 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-208ENST00000453705 ST3GAL6Q9Y274 331 aa6.24□□□□□ -1.41
BRCC3-208ENST00000453705 VSIG4Q9Y279 399 aa6.24□□□□□ -1.41
BRCC3-208ENST00000453705 FREM1Q5H8C1 2179 aa6.24□□□□□ -1.41
BRCC3-208ENST00000453705 DUS4LO95620 317 aaKnown RBP6.24□□□□□ -1.41
BRCC3-208ENST00000453705 APOHP02749 345 aaPredicted RBP6.24□□□□□ -1.41
BRCC3-208ENST00000453705 GNB3P16520 340 aa6.24□□□□□ -1.41
BRCC3-208ENST00000453705 IGHV1-2P23083 117 aa6.24□□□□□ -1.41
BRCC3-208ENST00000453705 TFPI2P48307 235 aa6.24□□□□□ -1.41
BRCC3-208ENST00000453705 GOLT1AQ6ZVE7 132 aa6.24□□□□□ -1.41
BRCC3-208ENST00000453705 Q8IYB0 196 aa6.24□□□□□ -1.41
BRCC3-208ENST00000453705 OR2T6Q8NHC8 308 aa6.24□□□□□ -1.41
BRCC3-208ENST00000453705 TMED6Q8WW62 240 aa6.24□□□□□ -1.41
BRCC3-208ENST00000453705 DEFB127Q9H1M4 99 aa6.24□□□□□ -1.41
BRCC3-208ENST00000453705 EDA2RQ9HAV5 297 aa6.24□□□□□ -1.41
BRCC3-208ENST00000453705 KMT2BQ9UMN6 2715 aaPredicted RBP6.24□□□□□ -1.41
BRCC3-208ENST00000453705 CHD3Q12873 2000 aaKnown RBP6.24□□□□□ -1.41
BRCC3-208ENST00000453705 COL12A1Q99715 3063 aa6.24□□□□□ -1.41
BRCC3-208ENST00000453705 TRBV6-7A0A0A0MS04 114 aa6.23□□□□□ -1.41
BRCC3-208ENST00000453705 IGKV1-12A0A0C4DH73 117 aa6.23□□□□□ -1.41
BRCC3-208ENST00000453705 IGKV1D-12P01611 117 aa6.23□□□□□ -1.41
BRCC3-208ENST00000453705 SOD3P08294 240 aa6.23□□□□□ -1.41
BRCC3-208ENST00000453705 GZMBP10144 247 aa6.23□□□□□ -1.41
BRCC3-208ENST00000453705 ERVFC1-1P60608 527 aa6.23□□□□□ -1.41
BRCC3-208ENST00000453705 TMEM187Q14656 261 aa6.23□□□□□ -1.41
BRCC3-208ENST00000453705 PRSS54Q6PEW0 395 aa6.23□□□□□ -1.41
BRCC3-208ENST00000453705 ZNF788Q6ZQV5 615 aa6.23□□□□□ -1.41
BRCC3-208ENST00000453705 ZNF418Q8TF45 676 aaPredicted RBP6.23□□□□□ -1.41
BRCC3-208ENST00000453705 SULT4A1Q9BR01 284 aa6.23□□□□□ -1.41
BRCC3-208ENST00000453705 GNB1LQ9BYB4 327 aa6.23□□□□□ -1.41
BRCC3-208ENST00000453705 FGF23Q9GZV9 251 aaPredicted RBP6.23□□□□□ -1.41
BRCC3-208ENST00000453705 IGF2RP11717 2491 aa6.23□□□□□ -1.41
BRCC3-208ENST00000453705 RBFOX3A6NFN3 312 aa6.23□□□□□ -1.41
BRCC3-208ENST00000453705 CD300LBA8K4G0 201 aa6.23□□□□□ -1.41
BRCC3-208ENST00000453705 NAPSAO96009 420 aa6.23□□□□□ -1.41
BRCC3-208ENST00000453705 CTSDP07339 412 aaPredicted RBP6.23□□□□□ -1.41
BRCC3-208ENST00000453705 SRIP30626 198 aa6.23□□□□□ -1.41
BRCC3-208ENST00000453705 RND3P61587 244 aa6.23□□□□□ -1.41
BRCC3-208ENST00000453705 MSMO1Q15800 293 aa6.23□□□□□ -1.41
BRCC3-208ENST00000453705 MDP1Q86V88 176 aa6.23□□□□□ -1.41
BRCC3-208ENST00000453705 OR51G1Q8NGK1 321 aa6.23□□□□□ -1.41
BRCC3-208ENST00000453705 OR5H2Q8NGV7 314 aa6.23□□□□□ -1.41
BRCC3-208ENST00000453705 CMBLQ96DG6 245 aa6.23□□□□□ -1.41
BRCC3-208ENST00000453705 HSD17B10Q99714 261 aaKnown RBP6.23□□□□□ -1.41
BRCC3-208ENST00000453705 CBLN4Q9NTU7 201 aa6.23□□□□□ -1.41
BRCC3-208ENST00000453705 AHCTF1Q8WYP5 2266 aa6.23□□□□□ -1.41
BRCC3-208ENST00000453705 SAA2-SAA4A0A096LPE2 208 aa6.22□□□□□ -1.41
BRCC3-208ENST00000453705 DUXBA0A1W2PPF3 345 aa6.22□□□□□ -1.41
BRCC3-208ENST00000453705 J3QT63 122 aa6.22□□□□□ -1.41
BRCC3-208ENST00000453705 PHOX2AO14813 284 aa6.22□□□□□ -1.41
BRCC3-208ENST00000453705 HIST1H2BKO60814 126 aa6.22□□□□□ -1.41
BRCC3-208ENST00000453705 TNFSF13O75888 250 aa6.22□□□□□ -1.41
BRCC3-208ENST00000453705 SFT2D2O95562 160 aa6.22□□□□□ -1.41
BRCC3-208ENST00000453705 HIST1H2BJP06899 126 aa6.22□□□□□ -1.41
BRCC3-208ENST00000453705 LINC00694P0DN24 101 aa6.22□□□□□ -1.41
BRCC3-208ENST00000453705 HIST1H2BOP23527 126 aa6.22□□□□□ -1.41
BRCC3-208ENST00000453705 HIST1H2BBP33778 126 aa6.22□□□□□ -1.41
BRCC3-208ENST00000453705 SAA4P35542 130 aa6.22□□□□□ -1.41
BRCC3-208ENST00000453705 HIST1H2BDP58876 126 aa6.22□□□□□ -1.41
BRCC3-208ENST00000453705 HIST1H2BCP62807 126 aa6.22□□□□□ -1.41
BRCC3-208ENST00000453705 DHRS2Q13268 280 aa6.22□□□□□ -1.41
BRCC3-208ENST00000453705 HIST2H2BEQ16778 126 aa6.22□□□□□ -1.41
BRCC3-208ENST00000453705 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.22□□□□□ -1.41
BRCC3-208ENST00000453705 AADACL3Q5VUY0 350 aa6.22□□□□□ -1.41
BRCC3-208ENST00000453705 TCTEX1D1Q8N7M0 179 aa6.22□□□□□ -1.41
BRCC3-208ENST00000453705 RBMXL3Q8N7X1 1067 aaKnown RBP6.22□□□□□ -1.41
BRCC3-208ENST00000453705 LINC00482Q8N8I6 264 aa6.22□□□□□ -1.41
BRCC3-208ENST00000453705 HIST1H2BHQ93079 126 aa6.22□□□□□ -1.41
BRCC3-208ENST00000453705 HIST1H2BNQ99877 126 aa6.22□□□□□ -1.41
BRCC3-208ENST00000453705 HIST1H2BMQ99879 126 aa6.22□□□□□ -1.41
BRCC3-208ENST00000453705 SFXN3Q9BWM7 321 aa6.22□□□□□ -1.41
BRCC3-208ENST00000453705 NMES1Q9C002 83 aa6.22□□□□□ -1.41
BRCC3-208ENST00000453705 PARP11Q9NR21 331 aa6.22□□□□□ -1.41
BRCC3-208ENST00000453705 CYTL1Q9NRR1 136 aa6.22□□□□□ -1.41
BRCC3-208ENST00000453705 COMMD9Q9P000 198 aa6.22□□□□□ -1.41
BRCC3-208ENST00000453705 ZNF835Q9Y2P0 537 aa6.22□□□□□ -1.41
BRCC3-208ENST00000453705 ZNF407Q9C0G0 2248 aa6.22□□□□□ -1.41
BRCC3-208ENST00000453705 A0A0U1RQV1 116 aa6.22□□□□□ -1.41
BRCC3-208ENST00000453705 GAGE12JA6NER3 117 aa6.22□□□□□ -1.41
BRCC3-208ENST00000453705 C9JQL5 133 aa6.22□□□□□ -1.41
BRCC3-208ENST00000453705 H3BSH0 61 aa6.22□□□□□ -1.41
BRCC3-208ENST00000453705 GAGE7O76087 117 aa6.22□□□□□ -1.41
BRCC3-208ENST00000453705 OR5AL1P0C617 328 aa6.22□□□□□ -1.41
BRCC3-208ENST00000453705 OR5AC1P0C628 307 aa6.22□□□□□ -1.41
BRCC3-208ENST00000453705 GAGE12FP0CL80 117 aa6.22□□□□□ -1.41
BRCC3-208ENST00000453705 GAGE12GP0CL81 117 aa6.22□□□□□ -1.41
BRCC3-208ENST00000453705 GAGE12IP0CL82 117 aa6.22□□□□□ -1.41
BRCC3-208ENST00000453705 ORM2P19652 201 aa6.22□□□□□ -1.41
BRCC3-208ENST00000453705 OPRM1P35372 400 aa6.22□□□□□ -1.41
BRCC3-208ENST00000453705 KIR2DS2P43631 304 aa6.22□□□□□ -1.41
BRCC3-208ENST00000453705 SLC38A11Q08AI6 406 aa6.22□□□□□ -1.41
BRCC3-208ENST00000453705 GAGE4Q13068 117 aa6.22□□□□□ -1.41
BRCC3-208ENST00000453705 IZUMO4Q1ZYL8 232 aa6.22□□□□□ -1.41
BRCC3-208ENST00000453705 TEX36Q5VZQ5 186 aa6.22□□□□□ -1.41
BRCC3-208ENST00000453705 MOB1BQ7L9L4 216 aa6.22□□□□□ -1.41
BRCC3-208ENST00000453705 C9orf106Q8NAJ2 232 aa6.22□□□□□ -1.41
BRCC3-208ENST00000453705 SPATA25Q9BR10 227 aa6.22□□□□□ -1.41
BRCC3-208ENST00000453705 ZNF71Q9NQZ8 489 aaPredicted RBP6.22□□□□□ -1.41
BRCC3-208ENST00000453705 ANXA10Q9UJ72 324 aa6.22□□□□□ -1.41
BRCC3-208ENST00000453705 CSAG2Q9Y5P2 127 aa6.22□□□□□ -1.41
BRCC3-208ENST00000453705 MYO18BQ8IUG5 2567 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms