RNA–Protein interactions for RNA: ENST00000442515.5

LINC00642-202, long intergenic non-protein coding RNA 642, humanhuman

TSL 3 BASIC

Gene LINC00642, Length 670 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-202ENST00000442515 NUDT3O95989 172 aa9.75□□□□□ -0.85
LINC00642-202ENST00000442515 IGKV3-20P01619 116 aa9.75□□□□□ -0.85
LINC00642-202ENST00000442515 FCER2P06734 321 aa9.75□□□□□ -0.85
LINC00642-202ENST00000442515 RAB3BP20337 219 aa9.75□□□□□ -0.85
LINC00642-202ENST00000442515 SDC2P34741 201 aa9.75□□□□□ -0.85
LINC00642-202ENST00000442515 CCL18P55774 89 aa9.75□□□□□ -0.85
LINC00642-202ENST00000442515 GLMPQ8WWB7 406 aa9.75□□□□□ -0.85
LINC00642-202ENST00000442515 S100ZQ8WXG8 99 aa9.75□□□□□ -0.85
LINC00642-202ENST00000442515 MRPL36Q9P0J6 103 aaKnown RBP9.75□□□□□ -0.85
LINC00642-202ENST00000442515 SMIM30A4D0T7 59 aa9.74□□□□□ -0.85
LINC00642-202ENST00000442515 PGLYRP1O75594 196 aaPredicted RBP9.74□□□□□ -0.85
LINC00642-202ENST00000442515 SCGNO76038 276 aa9.74□□□□□ -0.85
LINC00642-202ENST00000442515 HBE1P02100 147 aa9.74□□□□□ -0.85
LINC00642-202ENST00000442515 DEFB1P60022 68 aa9.74□□□□□ -0.85
LINC00642-202ENST00000442515 HERV-K104P61576 105 aa9.74□□□□□ -0.85
LINC00642-202ENST00000442515 ERHP84090 104 aaKnown RBP9.74□□□□□ -0.85
LINC00642-202ENST00000442515 GDF5OSQ5U4N7 250 aa9.74□□□□□ -0.85
LINC00642-202ENST00000442515 C16orf54Q6UWD8 224 aa9.74□□□□□ -0.85
LINC00642-202ENST00000442515 HOGA1Q86XE5 327 aa9.74□□□□□ -0.85
LINC00642-202ENST00000442515 ZNF709Q8N972 641 aa9.74□□□□□ -0.85
LINC00642-202ENST00000442515 U3KQE9 123 aa9.74□□□□□ -0.85
LINC00642-202ENST00000442515 CLN5O75503 358 aa9.73□□□□□ -0.85
LINC00642-202ENST00000442515 S100A5P33763 92 aa9.73□□□□□ -0.85
LINC00642-202ENST00000442515 AP2S1P53680 142 aaPredicted RBP9.73□□□□□ -0.85
LINC00642-202ENST00000442515 MXD1Q05195 221 aa9.73□□□□□ -0.85
LINC00642-202ENST00000442515 SPINK9Q5DT21 86 aa9.73□□□□□ -0.85
LINC00642-202ENST00000442515 TTC32Q5I0X7 151 aa9.73□□□□□ -0.85
LINC00642-202ENST00000442515 OR4A16Q8NH70 328 aa9.73□□□□□ -0.85
LINC00642-202ENST00000442515 LGALS14Q8TCE9 139 aa9.73□□□□□ -0.85
LINC00642-202ENST00000442515 BORCS5Q969J3 196 aa9.73□□□□□ -0.85
LINC00642-202ENST00000442515 TMEM230Q96A57 120 aa9.73□□□□□ -0.85
LINC00642-202ENST00000442515 WDR12Q9GZL7 423 aaKnown RBP9.73□□□□□ -0.85
LINC00642-202ENST00000442515 SEPSECSQ9HD40 501 aaKnown RBP9.73□□□□□ -0.85
LINC00642-202ENST00000442515 NRN1Q9NPD7 142 aa9.73□□□□□ -0.85
LINC00642-202ENST00000442515 GOLT1BQ9Y3E0 138 aa9.73□□□□□ -0.85
LINC00642-202ENST00000442515 J3QL48 77 aa9.72□□□□□ -0.85
LINC00642-202ENST00000442515 NKX2-1P43699 371 aaPredicted RBP9.72□□□□□ -0.85
LINC00642-202ENST00000442515 DLK1P80370 383 aa9.72□□□□□ -0.85
LINC00642-202ENST00000442515 ZNF846Q147U1 533 aa9.72□□□□□ -0.85
LINC00642-202ENST00000442515 RRN3P1Q2M238 152 aa9.72□□□□□ -0.85
LINC00642-202ENST00000442515 C1orf158Q8N1D5 194 aa9.72□□□□□ -0.85
LINC00642-202ENST00000442515 C7orf50Q9BRJ6 194 aaKnown RBP9.72□□□□□ -0.85
LINC00642-202ENST00000442515 Q9H8V8 135 aa9.72□□□□□ -0.85
LINC00642-202ENST00000442515 DNAH8Q96JB1 4490 aa9.72□□□□□ -0.85
LINC00642-202ENST00000442515 IGKV1-17P01599 117 aa9.71□□□□□ -0.86
LINC00642-202ENST00000442515 HNRNPCP07910 306 aaKnown RBP eCLIP9.71□□□□□ -0.86
LINC00642-202ENST00000442515 CLEC2LP0C7M8 214 aa9.71□□□□□ -0.86
LINC00642-202ENST00000442515 FUSP35637 526 aaKnown RBP eCLIP9.71□□□□□ -0.86
LINC00642-202ENST00000442515 ETV6P41212 452 aa9.71□□□□□ -0.86
LINC00642-202ENST00000442515 HOXA1P49639 335 aaPredicted RBP9.71□□□□□ -0.86
LINC00642-202ENST00000442515 HSPE1P61604 102 aaKnown RBP9.71□□□□□ -0.86
LINC00642-202ENST00000442515 TIGITQ495A1 244 aa9.71□□□□□ -0.86
LINC00642-202ENST00000442515 MZT2AQ6P582 158 aa9.71□□□□□ -0.86
LINC00642-202ENST00000442515 SSX7Q7RTT5 188 aa9.71□□□□□ -0.86
LINC00642-202ENST00000442515 SLC35B3Q9H1N7 401 aa9.71□□□□□ -0.86
LINC00642-202ENST00000442515 Q9H3A6 140 aa9.71□□□□□ -0.86
LINC00642-202ENST00000442515 FNDC4Q9H6D8 234 aaPredicted RBP9.71□□□□□ -0.86
LINC00642-202ENST00000442515 MDFICQ9P1T7 246 aa9.71□□□□□ -0.86
LINC00642-202ENST00000442515 DAPK2Q9UIK4 370 aa9.71□□□□□ -0.86
LINC00642-202ENST00000442515 NOTOA8MTQ0 251 aa9.7□□□□□ -0.86
LINC00642-202ENST00000442515 SCGB2A1O75556 95 aa9.7□□□□□ -0.86
LINC00642-202ENST00000442515 SNCAP37840 140 aa9.7□□□□□ -0.86
LINC00642-202ENST00000442515 SFXN4Q6P4A7 337 aa9.7□□□□□ -0.86
LINC00642-202ENST00000442515 H2BFWTQ7Z2G1 175 aa9.7□□□□□ -0.86
LINC00642-202ENST00000442515 CMTM1Q8IZ96 169 aa9.7□□□□□ -0.86
LINC00642-202ENST00000442515 OR5AP2Q8NGF4 316 aa9.7□□□□□ -0.86
LINC00642-202ENST00000442515 OR4X1Q8NH49 305 aa9.7□□□□□ -0.86
LINC00642-202ENST00000442515 RNF141Q8WVD5 230 aa9.7□□□□□ -0.86
LINC00642-202ENST00000442515 SEC22AQ96IW7 307 aa9.7□□□□□ -0.86
LINC00642-202ENST00000442515 SAV1Q9H4B6 383 aaPredicted RBP9.7□□□□□ -0.86
LINC00642-202ENST00000442515 RHBDL2Q9NX52 303 aa9.7□□□□□ -0.86
LINC00642-202ENST00000442515 LRP1Q07954 4544 aaKnown RBP9.7□□□□□ -0.86
LINC00642-202ENST00000442515 F5H768 121 aa9.69□□□□□ -0.86
LINC00642-202ENST00000442515 CORTO00230 105 aa9.69□□□□□ -0.86
LINC00642-202ENST00000442515 OPRK1P41145 380 aa9.69□□□□□ -0.86
LINC00642-202ENST00000442515 CLINT1Q14677 625 aa9.69□□□□□ -0.86
LINC00642-202ENST00000442515 MLANAQ16655 118 aa9.69□□□□□ -0.86
LINC00642-202ENST00000442515 SPANXN2Q5MJ10 180 aa9.69□□□□□ -0.86
LINC00642-202ENST00000442515 SIGLEC15Q6ZMC9 328 aa9.69□□□□□ -0.86
LINC00642-202ENST00000442515 FOXI2Q6ZQN5 318 aa9.69□□□□□ -0.86
LINC00642-202ENST00000442515 OR4B1Q8NGF8 309 aa9.69□□□□□ -0.86
LINC00642-202ENST00000442515 ZNF2Q9BSG1 426 aaPredicted RBP9.69□□□□□ -0.86
LINC00642-202ENST00000442515 FXYD6Q9H0Q3 95 aa9.69□□□□□ -0.86
LINC00642-202ENST00000442515 EHFQ9NZC4 300 aa9.69□□□□□ -0.86
LINC00642-202ENST00000442515 TRAV18A0A075B6X5 111 aa9.68□□□□□ -0.86
LINC00642-202ENST00000442515 RGS5O15539 181 aa9.68□□□□□ -0.86
LINC00642-202ENST00000442515 IGKV1-39P01597 117 aa9.68□□□□□ -0.86
LINC00642-202ENST00000442515 IGKV1D-39P04432 117 aa9.68□□□□□ -0.86
LINC00642-202ENST00000442515 DEFB130BP0DP73 79 aa9.68□□□□□ -0.86
LINC00642-202ENST00000442515 DEFB130AP0DP74 79 aa9.68□□□□□ -0.86
LINC00642-202ENST00000442515 RNASE2P10153 161 aaKnown RBP9.68□□□□□ -0.86
LINC00642-202ENST00000442515 SCAND1P57086 179 aa9.68□□□□□ -0.86
LINC00642-202ENST00000442515 USF2Q15853 346 aaPredicted RBP9.68□□□□□ -0.86
LINC00642-202ENST00000442515 CCDC190Q86UF4 302 aa9.68□□□□□ -0.86
LINC00642-202ENST00000442515 MRGPRFQ96AM1 343 aa9.68□□□□□ -0.86
LINC00642-202ENST00000442515 CLUHP3Q96NS8 147 aa9.68□□□□□ -0.86
LINC00642-202ENST00000442515 FAT3Q8TDW7 4589 aa9.68□□□□□ -0.86
LINC00642-202ENST00000442515 MEIS3P1A6NDR6 274 aa9.67□□□□□ -0.86
LINC00642-202ENST00000442515 LYRM9A8MSI8 78 aa9.67□□□□□ -0.86
LINC00642-202ENST00000442515 INS-IGF2F8WCM5 200 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms