RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 IGKV1D-12P01611 117 aa8.82□□□□□ -1
PTCH1-206ENST00000421141 TNFRSF18Q9Y5U5 241 aa8.82□□□□□ -1
PTCH1-206ENST00000421141 PLXNB1O43157 2135 aa8.82□□□□□ -1
PTCH1-206ENST00000421141 RPL13AP40429 203 aaKnown RBP8.82□□□□□ -1
PTCH1-206ENST00000421141 IER3P46695 156 aa8.82□□□□□ -1
PTCH1-206ENST00000421141 C11orf91Q3C1V1 193 aa8.82□□□□□ -1
PTCH1-206ENST00000421141 TMEM144Q7Z5S9 345 aa8.82□□□□□ -1
PTCH1-206ENST00000421141 CYB561D1Q8N8Q1 229 aa8.82□□□□□ -1
PTCH1-206ENST00000421141 MPZP25189 248 aa8.82□□□□□ -1
PTCH1-206ENST00000421141 Q6P435 159 aa8.82□□□□□ -1
PTCH1-206ENST00000421141 ZNF841Q6ZN19 808 aa8.82□□□□□ -1
PTCH1-206ENST00000421141 PGLYRP4Q96LB8 373 aa8.82□□□□□ -1
PTCH1-206ENST00000421141 IGKV1D-13A0A0B4J2D9 117 aa8.82□□□□□ -1
PTCH1-206ENST00000421141 IGKV1-13P0DP09 117 aa8.82□□□□□ -1
PTCH1-206ENST00000421141 EFNB1P98172 346 aa8.82□□□□□ -1
PTCH1-206ENST00000421141 UBE2DNLQ8IWF7 75 aa8.82□□□□□ -1
PTCH1-206ENST00000421141 TET2Q6N021 2002 aaPredicted RBP8.82□□□□□ -1
PTCH1-206ENST00000421141 A0A0A6YYD4 124 aa8.82□□□□□ -1
PTCH1-206ENST00000421141 SCGB1C2P0DMR2 95 aa8.82□□□□□ -1
PTCH1-206ENST00000421141 CRYBB3P26998 211 aa8.82□□□□□ -1
PTCH1-206ENST00000421141 PRSS8Q16651 343 aa8.82□□□□□ -1
PTCH1-206ENST00000421141 SRSF8Q9BRL6 282 aaKnown RBP8.82□□□□□ -1
PTCH1-206ENST00000421141 MAP1LC3AQ9H492 121 aa8.82□□□□□ -1
PTCH1-206ENST00000421141 PEF1Q9UBV8 284 aaKnown RBP8.82□□□□□ -1
PTCH1-206ENST00000421141 CRXO43186 299 aaPredicted RBP8.81□□□□□ -1
PTCH1-206ENST00000421141 GCHFRP30047 84 aa8.81□□□□□ -1
PTCH1-206ENST00000421141 CFHR2P36980 270 aa8.81□□□□□ -1
PTCH1-206ENST00000421141 IQCJQ1A5X6 159 aa8.81□□□□□ -1
PTCH1-206ENST00000421141 SGMS2Q8NHU3 365 aa8.81□□□□□ -1
PTCH1-206ENST00000421141 CD8AP01732 235 aa8.81□□□□□ -1
PTCH1-206ENST00000421141 ATG101Q9BSB4 218 aa8.81□□□□□ -1
PTCH1-206ENST00000421141 TRAF4Q9BUZ4 470 aaPredicted RBP8.81□□□□□ -1
PTCH1-206ENST00000421141 ELOBQ15370 118 aa8.81□□□□□ -1
PTCH1-206ENST00000421141 CD55P08174 381 aa8.81□□□□□ -1
PTCH1-206ENST00000421141 PMS2P11Q13670 270 aa8.81□□□□□ -1
PTCH1-206ENST00000421141 TCF24Q7RTU0 167 aa8.81□□□□□ -1
PTCH1-206ENST00000421141 ZNF253O75346 499 aa8.81□□□□□ -1
PTCH1-206ENST00000421141 AWAT1Q58HT5 328 aa8.81□□□□□ -1
PTCH1-206ENST00000421141 C18orf12Q96KH6 178 aa8.81□□□□□ -1
PTCH1-206ENST00000421141 DEFA6Q01524 100 aa8.81□□□□□ -1
PTCH1-206ENST00000421141 FAM24BQ8N5W8 94 aa8.81□□□□□ -1
PTCH1-206ENST00000421141 IFT22Q9H7X7 185 aa8.81□□□□□ -1
PTCH1-206ENST00000421141 DLX1P56177 255 aa8.8□□□□□ -1
PTCH1-206ENST00000421141 CD81P60033 236 aa8.8□□□□□ -1
PTCH1-206ENST00000421141 SCGB1D4Q6XE38 83 aa8.8□□□□□ -1
PTCH1-206ENST00000421141 IGF2RP11717 2491 aa8.8□□□□□ -1
PTCH1-206ENST00000421141 ZNF880Q6PDB4 577 aa8.8□□□□□ -1
PTCH1-206ENST00000421141 C1QTNF4Q9BXJ3 329 aa8.8□□□□□ -1
PTCH1-206ENST00000421141 OR8A1Q8NGG7 326 aa8.8□□□□□ -1
PTCH1-206ENST00000421141 KCNS1Q96KK3 526 aa8.8□□□□□ -1
PTCH1-206ENST00000421141 MCRIP2Q9BUT9 160 aaKnown RBP8.8□□□□□ -1
PTCH1-206ENST00000421141 Q9H3A6 140 aa8.8□□□□□ -1
PTCH1-206ENST00000421141 TRBV6-6A0A0A6YYG2 114 aa8.8□□□□□ -1
PTCH1-206ENST00000421141 HSPB1P04792 205 aaKnown RBP8.8□□□□□ -1
PTCH1-206ENST00000421141 C2orf88Q9BSF0 95 aa8.8□□□□□ -1
PTCH1-206ENST00000421141 SIGLEC9Q9Y336 463 aa8.8□□□□□ -1
PTCH1-206ENST00000421141 PRDM13Q9H4Q3 707 aa8.8□□□□□ -1
PTCH1-206ENST00000421141 SHISA9B4DS77 424 aa8.8□□□□□ -1
PTCH1-206ENST00000421141 H2BFSP57053 126 aa8.8□□□□□ -1
PTCH1-206ENST00000421141 LCN12Q6JVE5 192 aa8.8□□□□□ -1
PTCH1-206ENST00000421141 PSMG4Q5JS54 123 aa8.79□□□□□ -1
PTCH1-206ENST00000421141 OR10W1Q8NGF6 305 aa8.79□□□□□ -1
PTCH1-206ENST00000421141 CD7P09564 240 aa8.79□□□□□ -1
PTCH1-206ENST00000421141 TFF3Q07654 80 aa8.79□□□□□ -1
PTCH1-206ENST00000421141 KIR3DL3Q8N743 410 aa8.79□□□□□ -1
PTCH1-206ENST00000421141 GLMPQ8WWB7 406 aa8.79□□□□□ -1
PTCH1-206ENST00000421141 CENPFP49454 3210 aa8.79□□□□□ -1
PTCH1-206ENST00000421141 RNF224P0DH78 156 aa8.79□□□□□ -1
PTCH1-206ENST00000421141 ZNF329Q86UD4 541 aa8.79□□□□□ -1
PTCH1-206ENST00000421141 COPS9Q8WXC6 57 aa8.79□□□□□ -1
PTCH1-206ENST00000421141 SHISA3A0PJX4 238 aa8.79□□□□□ -1
PTCH1-206ENST00000421141 OR11H12B2RN74 326 aa8.79□□□□□ -1
PTCH1-206ENST00000421141 M0R381 172 aa8.79□□□□□ -1
PTCH1-206ENST00000421141 F8VVB4 439 aa8.78□□□□□ -1
PTCH1-206ENST00000421141 F8VWA3 439 aa8.78□□□□□ -1
PTCH1-206ENST00000421141 CLRN3Q8NCR9 226 aa8.78□□□□□ -1
PTCH1-206ENST00000421141 DANCRP0C864 163 aa8.78□□□□□ -1
PTCH1-206ENST00000421141 C2orf83Q53S99 150 aa8.78□□□□□ -1
PTCH1-206ENST00000421141 PAPPA-AS1Q5QFB9 102 aa8.78□□□□□ -1
PTCH1-206ENST00000421141 TEX36Q5VZQ5 186 aa8.78□□□□□ -1
PTCH1-206ENST00000421141 LRTM2Q8N967 370 aa8.78□□□□□ -1
PTCH1-206ENST00000421141 GSX1Q9H4S2 264 aaPredicted RBP8.78□□□□□ -1
PTCH1-206ENST00000421141 DNAH12Q6ZR08 3092 aa8.78□□□□□ -1
PTCH1-206ENST00000421141 TMEM218A2RU14 115 aa8.78□□□□□ -1
PTCH1-206ENST00000421141 PEX7O00628 323 aa8.78□□□□□ -1
PTCH1-206ENST00000421141 IGHV2-5P01817 119 aa8.78□□□□□ -1
PTCH1-206ENST00000421141 SOD3P08294 240 aa8.78□□□□□ -1
PTCH1-206ENST00000421141 NAT1P18440 290 aa8.78□□□□□ -1
PTCH1-206ENST00000421141 ADORA2A-AS1P86434 159 aa8.78□□□□□ -1
PTCH1-206ENST00000421141 OR1N2Q8NGR9 330 aa8.78□□□□□ -1
PTCH1-206ENST00000421141 NEU1Q99519 415 aa8.78□□□□□ -1
PTCH1-206ENST00000421141 ASCL2Q99929 193 aa8.78□□□□□ -1
PTCH1-206ENST00000421141 GEMIN7Q9H840 131 aaKnown RBP8.78□□□□□ -1
PTCH1-206ENST00000421141 NAPSAO96009 420 aa8.78□□□□□ -1
PTCH1-206ENST00000421141 TMEM183BQ1AE95 376 aa8.78□□□□□ -1
PTCH1-206ENST00000421141 OTORQ9NRC9 128 aa8.78□□□□□ -1
PTCH1-206ENST00000421141 M0R3E3 92 aa8.78□□□□□ -1
PTCH1-206ENST00000421141 CXCL2P19875 107 aa8.78□□□□□ -1
PTCH1-206ENST00000421141 GRNP28799 593 aaKnown RBP8.78□□□□□ -1
PTCH1-206ENST00000421141 FAM3BP58499 235 aaPredicted RBP8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms