RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 PPIFP30405 207 aaKnown RBP10.74□□□□□ -0.69
SCN1B-202ENST00000415950 RPS20P60866 119 aaKnown RBP10.74□□□□□ -0.69
SCN1B-202ENST00000415950 ASPHD1Q5U4P2 390 aa10.74□□□□□ -0.69
SCN1B-202ENST00000415950 UNQ6494/PRO21346Q6UXR6 183 aa10.74□□□□□ -0.69
SCN1B-202ENST00000415950 NHP2Q9NX24 153 aaKnown RBP10.74□□□□□ -0.69
SCN1B-202ENST00000415950 BRCA2P51587 3418 aa10.74□□□□□ -0.69
SCN1B-202ENST00000415950 ZSWIM8A7E2V4 1837 aa10.74□□□□□ -0.69
SCN1B-202ENST00000415950 OR9G9P0C7N8 305 aa10.74□□□□□ -0.69
SCN1B-202ENST00000415950 LYL1P12980 280 aa10.74□□□□□ -0.69
SCN1B-202ENST00000415950 CD24P25063 80 aa10.74□□□□□ -0.69
SCN1B-202ENST00000415950 LURAP1LQ8IV03 231 aa10.74□□□□□ -0.69
SCN1B-202ENST00000415950 CLEC7AQ9BXN2 247 aa10.74□□□□□ -0.69
SCN1B-202ENST00000415950 SEPSECSQ9HD40 501 aaKnown RBP10.74□□□□□ -0.69
SCN1B-202ENST00000415950 NPIPB11E5RHQ5 1161 aa10.74□□□□□ -0.69
SCN1B-202ENST00000415950 OR13C6PQ8NH95 151 aa10.74□□□□□ -0.69
SCN1B-202ENST00000415950 COLQQ9Y215 455 aaPredicted RBP10.74□□□□□ -0.69
SCN1B-202ENST00000415950 IGKV1-6A0A0C4DH72 117 aa10.73□□□□□ -0.69
SCN1B-202ENST00000415950 FTH1P19P0C7X4 201 aa10.73□□□□□ -0.69
SCN1B-202ENST00000415950 RIPPLY3P57055 190 aa10.73□□□□□ -0.69
SCN1B-202ENST00000415950 SUMO2P61956 95 aaKnown RBP10.73□□□□□ -0.69
SCN1B-202ENST00000415950 C1orf174Q8IYL3 243 aa10.73□□□□□ -0.69
SCN1B-202ENST00000415950 FDCSPQ8NFU4 85 aa10.73□□□□□ -0.69
SCN1B-202ENST00000415950 A0A1W2PS18 150 aa10.73□□□□□ -0.69
SCN1B-202ENST00000415950 NDUFA3O95167 84 aa10.73□□□□□ -0.69
SCN1B-202ENST00000415950 MRAP2Q96G30 205 aa10.73□□□□□ -0.69
SCN1B-202ENST00000415950 MRPL20Q9BYC9 149 aaKnown RBP10.73□□□□□ -0.69
SCN1B-202ENST00000415950 IGLV3-12A0A075B6K2 115 aa10.73□□□□□ -0.69
SCN1B-202ENST00000415950 PPP1R17O96001 155 aa10.73□□□□□ -0.69
SCN1B-202ENST00000415950 SAPCD1Q5SSQ6 148 aa10.73□□□□□ -0.69
SCN1B-202ENST00000415950 Q6ZT83 130 aa10.73□□□□□ -0.69
SCN1B-202ENST00000415950 TEX45Q8NA69 505 aa10.73□□□□□ -0.69
SCN1B-202ENST00000415950 DIRC2Q96SL1 478 aa10.73□□□□□ -0.69
SCN1B-202ENST00000415950 CHRNA10Q9GZZ6 450 aa10.73□□□□□ -0.69
SCN1B-202ENST00000415950 RPP21Q9H633 154 aaKnown RBP10.73□□□□□ -0.69
SCN1B-202ENST00000415950 JKAMPQ9P055 326 aa10.73□□□□□ -0.69
SCN1B-202ENST00000415950 TRAV3A0A0B4J244 114 aa10.72□□□□□ -0.69
SCN1B-202ENST00000415950 TRAV5A0A0B4J249 113 aa10.72□□□□□ -0.69
SCN1B-202ENST00000415950 CSRP1P21291 193 aaKnown RBP10.72□□□□□ -0.69
SCN1B-202ENST00000415950 FNDC1Q4ZHG4 1894 aaPredicted RBP10.72□□□□□ -0.69
SCN1B-202ENST00000415950 FOXH1O75593 365 aa10.72□□□□□ -0.69
SCN1B-202ENST00000415950 PSG9Q00887 426 aa10.72□□□□□ -0.69
SCN1B-202ENST00000415950 FAM159AQ6UWV7 190 aa10.72□□□□□ -0.69
SCN1B-202ENST00000415950 SYT8Q8NBV8 401 aa10.72□□□□□ -0.69
SCN1B-202ENST00000415950 LINC01560Q8TB33 94 aa10.72□□□□□ -0.69
SCN1B-202ENST00000415950 SNHG12Q9BXW3 62 aa10.72□□□□□ -0.69
SCN1B-202ENST00000415950 FAM169BQ8N8A8 192 aa10.72□□□□□ -0.69
SCN1B-202ENST00000415950 ZNF703Q9H7S9 590 aaPredicted RBP10.72□□□□□ -0.69
SCN1B-202ENST00000415950 IGHV1-69-2A0A0G2JMI3 117 aa10.72□□□□□ -0.69
SCN1B-202ENST00000415950 A8MWP6 167 aa10.72□□□□□ -0.69
SCN1B-202ENST00000415950 MLANAQ16655 118 aa10.72□□□□□ -0.69
SCN1B-202ENST00000415950 SCGB3A1Q96QR1 104 aa10.72□□□□□ -0.69
SCN1B-202ENST00000415950 METRNQ9UJH8 293 aa10.72□□□□□ -0.69
SCN1B-202ENST00000415950 TRAV30A0A087WSZ9 112 aa10.71□□□□□ -0.69
SCN1B-202ENST00000415950 RSPO1Q2MKA7 263 aaPredicted RBP10.71□□□□□ -0.69
SCN1B-202ENST00000415950 CRIM1Q9NZV1 1036 aa10.71□□□□□ -0.69
SCN1B-202ENST00000415950 PLA2G5P39877 138 aa10.71□□□□□ -0.69
SCN1B-202ENST00000415950 C10orf91Q5T1B1 145 aa10.71□□□□□ -0.69
SCN1B-202ENST00000415950 OSR1Q8TAX0 266 aaPredicted RBP10.71□□□□□ -0.69
SCN1B-202ENST00000415950 JMJD8Q96S16 334 aa10.71□□□□□ -0.69
SCN1B-202ENST00000415950 VKORC1Q9BQB6 163 aa10.71□□□□□ -0.69
SCN1B-202ENST00000415950 LSM4Q9Y4Z0 139 aaKnown RBP10.71□□□□□ -0.69
SCN1B-202ENST00000415950 A0A1B0GV72 72 aa10.71□□□□□ -0.7
SCN1B-202ENST00000415950 TSPAN13O95857 204 aa10.71□□□□□ -0.7
SCN1B-202ENST00000415950 GLRXP35754 106 aa10.71□□□□□ -0.7
SCN1B-202ENST00000415950 LHX2P50458 406 aa10.71□□□□□ -0.7
SCN1B-202ENST00000415950 EFNB3Q15768 340 aa10.71□□□□□ -0.7
SCN1B-202ENST00000415950 LINC00479Q96M42 142 aa10.71□□□□□ -0.7
SCN1B-202ENST00000415950 Q9H3A6 140 aa10.71□□□□□ -0.7
SCN1B-202ENST00000415950 PILRBQ9UKJ0 227 aa10.71□□□□□ -0.7
SCN1B-202ENST00000415950 LAMA3Q16787 3333 aa10.71□□□□□ -0.7
SCN1B-202ENST00000415950 IZUMO1RA6ND01 250 aa10.7□□□□□ -0.7
SCN1B-202ENST00000415950 FOXF2Q12947 444 aa10.7□□□□□ -0.7
SCN1B-202ENST00000415950 RRN3P1Q2M238 152 aa10.7□□□□□ -0.7
SCN1B-202ENST00000415950 FBLN7Q53RD9 439 aa10.7□□□□□ -0.7
SCN1B-202ENST00000415950 C5orf42Q9H799 3197 aa10.7□□□□□ -0.7
SCN1B-202ENST00000415950 DLEU1O43261 78 aa10.7□□□□□ -0.7
SCN1B-202ENST00000415950 CIRBPQ14011 172 aaKnown RBP10.7□□□□□ -0.7
SCN1B-202ENST00000415950 C10orf55Q5SWW7 151 aa10.7□□□□□ -0.7
SCN1B-202ENST00000415950 ORMDL3Q8N138 153 aa10.7□□□□□ -0.7
SCN1B-202ENST00000415950 OR10W1Q8NGF6 305 aa10.7□□□□□ -0.7
SCN1B-202ENST00000415950 WDR83OSQ9Y284 106 aa10.7□□□□□ -0.7
SCN1B-202ENST00000415950 THADAQ6YHU6 1953 aa10.7□□□□□ -0.7
SCN1B-202ENST00000415950 UBE2L6O14933 153 aa10.7□□□□□ -0.7
SCN1B-202ENST00000415950 FAM71F2Q6NXP2 309 aa10.7□□□□□ -0.7
SCN1B-202ENST00000415950 TREML4Q6UXN2 200 aa10.7□□□□□ -0.7
SCN1B-202ENST00000415950 TMEM144Q7Z5S9 345 aa10.7□□□□□ -0.7
SCN1B-202ENST00000415950 DMRTC2Q8IXT2 367 aaPredicted RBP10.7□□□□□ -0.7
SCN1B-202ENST00000415950 DEFB104AQ8WTQ1 72 aa10.7□□□□□ -0.7
SCN1B-202ENST00000415950 MYO9AB2RTY4 2548 aa10.7□□□□□ -0.7
SCN1B-202ENST00000415950 LOC105371242A0A075B767 164 aa10.7□□□□□ -0.7
SCN1B-202ENST00000415950 IGKV1D-33P01593 117 aa10.7□□□□□ -0.7
SCN1B-202ENST00000415950 IGKV1-33P01594 117 aa10.7□□□□□ -0.7
SCN1B-202ENST00000415950 PAX9P55771 341 aa10.7□□□□□ -0.7
SCN1B-202ENST00000415950 RNF115Q9Y4L5 304 aa10.7□□□□□ -0.7
SCN1B-202ENST00000415950 KBTBD11-OT1A0A1B0GTJ5 212 aa10.69□□□□□ -0.7
SCN1B-202ENST00000415950 HAX1O00165 279 aa10.69□□□□□ -0.7
SCN1B-202ENST00000415950 CEACAM4O75871 244 aa10.69□□□□□ -0.7
SCN1B-202ENST00000415950 SAA1P0DJI8 122 aaPredicted RBP10.69□□□□□ -0.7
SCN1B-202ENST00000415950 NEUROG1Q92886 237 aa10.69□□□□□ -0.7
SCN1B-202ENST00000415950 TRAV9-2A0A087WT02 112 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms