RNA–Protein interactions for RNA: ENST00000397163.7

CAPN3-206, Transcript of calpain 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CAPN3, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-206ENST00000397163 SLC25A33Q9BSK2 321 aa7.47□□□□□ -1.21
CAPN3-206ENST00000397163 TNFRSF19Q9NS68 423 aa7.47□□□□□ -1.21
CAPN3-206ENST00000397163 AMMECR1Q9Y4X0 333 aaPredicted RBP7.47□□□□□ -1.21
CAPN3-206ENST00000397163 MED13Q9UHV7 2174 aa7.47□□□□□ -1.21
CAPN3-206ENST00000397163 H3BUT2 72 aa7.47□□□□□ -1.21
CAPN3-206ENST00000397163 CECR9P0C854 216 aa7.47□□□□□ -1.21
CAPN3-206ENST00000397163 NUP35Q8NFH5 326 aa7.47□□□□□ -1.21
CAPN3-206ENST00000397163 TMEM70Q9BUB7 260 aa7.47□□□□□ -1.21
CAPN3-206ENST00000397163 C19orf24Q9BVV8 132 aa7.47□□□□□ -1.21
CAPN3-206ENST00000397163 PRRC2CQ9Y520 2896 aaKnown RBP7.47□□□□□ -1.21
CAPN3-206ENST00000397163 BMI1P35226 326 aa7.46□□□□□ -1.21
CAPN3-206ENST00000397163 ZNF138P52744 262 aa7.46□□□□□ -1.21
CAPN3-206ENST00000397163 TBR1Q16650 682 aa7.46□□□□□ -1.21
CAPN3-206ENST00000397163 HES3Q5TGS1 186 aa7.46□□□□□ -1.21
CAPN3-206ENST00000397163 Q6ZT83 130 aa7.46□□□□□ -1.21
CAPN3-206ENST00000397163 TMEM116Q8NCL8 245 aa7.46□□□□□ -1.21
CAPN3-206ENST00000397163 MDS2Q8NDY4 140 aa7.46□□□□□ -1.21
CAPN3-206ENST00000397163 SNRNP40Q96DI7 357 aaKnown RBP7.46□□□□□ -1.21
CAPN3-206ENST00000397163 ZFHX4Q86UP3 3567 aa7.46□□□□□ -1.21
CAPN3-206ENST00000397163 SRRM5B3KS81 715 aa7.46□□□□□ -1.22
CAPN3-206ENST00000397163 G3V4G9 280 aa7.46□□□□□ -1.22
CAPN3-206ENST00000397163 IGKV3-15P01624 115 aa7.46□□□□□ -1.22
CAPN3-206ENST00000397163 PRCDQ00LT1 54 aa7.46□□□□□ -1.22
CAPN3-206ENST00000397163 MZT1Q08AG7 82 aa7.46□□□□□ -1.22
CAPN3-206ENST00000397163 PEAR1Q5VY43 1037 aaPredicted RBP7.46□□□□□ -1.22
CAPN3-206ENST00000397163 MORN5Q5VZ52 161 aa7.46□□□□□ -1.22
CAPN3-206ENST00000397163 VWA1Q6PCB0 445 aa7.46□□□□□ -1.22
CAPN3-206ENST00000397163 RASL11AQ6T310 242 aa7.46□□□□□ -1.22
CAPN3-206ENST00000397163 WIPF2Q8TF74 440 aaPredicted RBP7.46□□□□□ -1.22
CAPN3-206ENST00000397163 GRAMD2BQ96HH9 432 aa7.46□□□□□ -1.22
CAPN3-206ENST00000397163 ARRDC1-AS1Q9H2J1 176 aa7.46□□□□□ -1.22
CAPN3-206ENST00000397163 PEF1Q9UBV8 284 aaKnown RBP7.46□□□□□ -1.22
CAPN3-206ENST00000397163 SH3BGRL2Q9UJC5 107 aa7.46□□□□□ -1.22
CAPN3-206ENST00000397163 PTPRBP23467 1997 aa7.46□□□□□ -1.22
CAPN3-206ENST00000397163 PYYP10082 97 aa7.46□□□□□ -1.22
CAPN3-206ENST00000397163 RPL24P83731 157 aaKnown RBP7.46□□□□□ -1.22
CAPN3-206ENST00000397163 TMEM164Q5U3C3 297 aa7.46□□□□□ -1.22
CAPN3-206ENST00000397163 OR4A5Q8NH83 315 aa7.46□□□□□ -1.22
CAPN3-206ENST00000397163 ADTRPQ96IZ2 230 aa7.46□□□□□ -1.22
CAPN3-206ENST00000397163 SGK494Q96LW2 274 aa7.46□□□□□ -1.22
CAPN3-206ENST00000397163 TNCP24821 2201 aa7.46□□□□□ -1.22
CAPN3-206ENST00000397163 DMDP11532 3685 aa7.45□□□□□ -1.22
CAPN3-206ENST00000397163 DYSFO75923 2080 aa7.45□□□□□ -1.22
CAPN3-206ENST00000397163 HIGD1CA8MV81 97 aa7.45□□□□□ -1.22
CAPN3-206ENST00000397163 UPK2O00526 184 aa7.45□□□□□ -1.22
CAPN3-206ENST00000397163 ACP1P24666 158 aa7.45□□□□□ -1.22
CAPN3-206ENST00000397163 BHLHA15Q7RTS1 189 aaPredicted RBP7.45□□□□□ -1.22
CAPN3-206ENST00000397163 GCSAMQ8N6F7 178 aa7.45□□□□□ -1.22
CAPN3-206ENST00000397163 AP1S3Q96PC3 154 aa7.45□□□□□ -1.22
CAPN3-206ENST00000397163 SPRY4Q9C004 299 aa7.45□□□□□ -1.22
CAPN3-206ENST00000397163 RIF1Q5UIP0 2472 aaKnown RBP7.45□□□□□ -1.22
CAPN3-206ENST00000397163 EP300Q09472 2414 aaPredicted RBP7.45□□□□□ -1.22
CAPN3-206ENST00000397163 PEX7O00628 323 aa7.45□□□□□ -1.22
CAPN3-206ENST00000397163 COX7A2P2O60397 106 aa7.45□□□□□ -1.22
CAPN3-206ENST00000397163 PPIAL4GP0DN37 164 aa7.45□□□□□ -1.22
CAPN3-206ENST00000397163 AZU1P20160 251 aa7.45□□□□□ -1.22
CAPN3-206ENST00000397163 NBL1P41271 181 aa7.45□□□□□ -1.22
CAPN3-206ENST00000397163 RBPJQ06330 500 aa7.45□□□□□ -1.22
CAPN3-206ENST00000397163 MEF2CQ06413 473 aaPredicted RBP7.45□□□□□ -1.22
CAPN3-206ENST00000397163 KLF5Q13887 457 aaPredicted RBP7.45□□□□□ -1.22
CAPN3-206ENST00000397163 C17orf58Q2M2W7 97 aa7.45□□□□□ -1.22
CAPN3-206ENST00000397163 CR1LQ2VPA4 569 aa7.45□□□□□ -1.22
CAPN3-206ENST00000397163 FAM201AQ5SY85 155 aa7.45□□□□□ -1.22
CAPN3-206ENST00000397163 C12orf54Q6X4T0 127 aa7.45□□□□□ -1.22
CAPN3-206ENST00000397163 MOGAT3Q86VF5 341 aa7.45□□□□□ -1.22
CAPN3-206ENST00000397163 PAXXQ9BUH6 204 aa7.45□□□□□ -1.22
CAPN3-206ENST00000397163 SLC25A2Q9BXI2 301 aa7.45□□□□□ -1.22
CAPN3-206ENST00000397163 MRPL32Q9BYC8 188 aaKnown RBP7.45□□□□□ -1.22
CAPN3-206ENST00000397163 PTPRZ1P23471 2315 aaPredicted RBP7.45□□□□□ -1.22
CAPN3-206ENST00000397163 TEX50A0A1B0GTY4 177 aa7.44□□□□□ -1.22
CAPN3-206ENST00000397163 C21orf140B9A014 251 aa7.44□□□□□ -1.22
CAPN3-206ENST00000397163 C2orf83Q53S99 150 aa7.44□□□□□ -1.22
CAPN3-206ENST00000397163 ZNF436-AS1Q8NC38 126 aaPredicted RBP7.44□□□□□ -1.22
CAPN3-206ENST00000397163 OR10W1Q8NGF6 305 aa7.44□□□□□ -1.22
CAPN3-206ENST00000397163 MBD6Q96DN6 1003 aa7.44□□□□□ -1.22
CAPN3-206ENST00000397163 URB1-AS1Q96HZ7 61 aa7.44□□□□□ -1.22
CAPN3-206ENST00000397163 FAM167A-AS1Q96KT0 104 aa7.44□□□□□ -1.22
CAPN3-206ENST00000397163 WDFY4Q6ZS81 3184 aa7.44□□□□□ -1.22
CAPN3-206ENST00000397163 SRRM4A7MD48 611 aaKnown RBP7.44□□□□□ -1.22
CAPN3-206ENST00000397163 IGKV1-16P04430 117 aa7.44□□□□□ -1.22
CAPN3-206ENST00000397163 HIST1H1EP10412 219 aaKnown RBP7.44□□□□□ -1.22
CAPN3-206ENST00000397163 CD69Q07108 199 aa7.44□□□□□ -1.22
CAPN3-206ENST00000397163 TM4SF20Q53R12 229 aa7.44□□□□□ -1.22
CAPN3-206ENST00000397163 FAM231DQ6ZW35 169 aa7.44□□□□□ -1.22
CAPN3-206ENST00000397163 PERPQ96FX8 193 aa7.44□□□□□ -1.22
CAPN3-206ENST00000397163 RAB9BQ9NP90 201 aa7.44□□□□□ -1.22
CAPN3-206ENST00000397163 ZNF257Q9Y2Q1 563 aa7.44□□□□□ -1.22
CAPN3-206ENST00000397163 KBTBD11-OT1A0A1B0GTJ5 212 aa7.44□□□□□ -1.22
CAPN3-206ENST00000397163 C22orf46C9J442 243 aa7.44□□□□□ -1.22
CAPN3-206ENST00000397163 CD5LO43866 347 aa7.44□□□□□ -1.22
CAPN3-206ENST00000397163 RNASE2P10153 161 aaKnown RBP7.44□□□□□ -1.22
CAPN3-206ENST00000397163 HTR1DP28221 377 aa7.44□□□□□ -1.22
CAPN3-206ENST00000397163 GNG5P63218 68 aa7.44□□□□□ -1.22
CAPN3-206ENST00000397163 POU2AF1Q16633 256 aa7.44□□□□□ -1.22
CAPN3-206ENST00000397163 TEX45Q8NA69 505 aa7.44□□□□□ -1.22
CAPN3-206ENST00000397163 FER1L6-AS2Q96M78 137 aa7.44□□□□□ -1.22
CAPN3-206ENST00000397163 CFAP47Q6ZTR5 3102 aa7.44□□□□□ -1.22
CAPN3-206ENST00000397163 OTOGLQ3ZCN5 2332 aa7.43□□□□□ -1.22
CAPN3-206ENST00000397163 TMEM238LA0A1B0GVL6 79 aa7.43□□□□□ -1.22
CAPN3-206ENST00000397163 SYS1-DBNDD2H3BUS1 97 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms