RNA–Protein interactions for RNA: ENST00000377942.7

PCDH8-202, Transcript of protocadherin 8, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH8, Length 5,088 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-202ENST00000377942 LINC01356Q8N9X3 169 aa16.16■□□□□ 0.18
PCDH8-202ENST00000377942 TTC28Q96AY4 2481 aa16.16■□□□□ 0.18
PCDH8-202ENST00000377942 PHF3Q92576 2039 aaKnown RBP16.16■□□□□ 0.18
PCDH8-202ENST00000377942 LMO1P25800 156 aa16.16■□□□□ 0.18
PCDH8-202ENST00000377942 TREML4Q6UXN2 200 aa16.16■□□□□ 0.18
PCDH8-202ENST00000377942 BPESC1Q9GZL8 116 aa16.16■□□□□ 0.18
PCDH8-202ENST00000377942 NMUP48645 174 aa16.15■□□□□ 0.18
PCDH8-202ENST00000377942 LDLRAD2Q5SZI1 272 aa16.15■□□□□ 0.18
PCDH8-202ENST00000377942 SP5Q6BEB4 398 aaPredicted RBP16.15■□□□□ 0.18
PCDH8-202ENST00000377942 PKDREJQ9NTG1 2253 aa16.15■□□□□ 0.18
PCDH8-202ENST00000377942 LEPP41159 167 aa16.15■□□□□ 0.18
PCDH8-202ENST00000377942 C10orf55Q5SWW7 151 aa16.15■□□□□ 0.18
PCDH8-202ENST00000377942 RPRMLQ8N4K4 120 aa16.15■□□□□ 0.18
PCDH8-202ENST00000377942 A0A1B0GWJ7 208 aa16.15■□□□□ 0.18
PCDH8-202ENST00000377942 M0R381 172 aa16.15■□□□□ 0.18
PCDH8-202ENST00000377942 FGF16O43320 207 aa16.15■□□□□ 0.18
PCDH8-202ENST00000377942 LYPD2Q6UXB3 125 aa16.15■□□□□ 0.18
PCDH8-202ENST00000377942 LEMD1Q68G75 181 aa16.14■□□□□ 0.17
PCDH8-202ENST00000377942 PSMB11A5LHX3 300 aa16.14■□□□□ 0.17
PCDH8-202ENST00000377942 C5orf52A6NGY3 159 aa16.14■□□□□ 0.17
PCDH8-202ENST00000377942 H3BUX3 64 aa16.14■□□□□ 0.17
PCDH8-202ENST00000377942 CMC4P56277 68 aaPredicted RBP16.14■□□□□ 0.17
PCDH8-202ENST00000377942 FER1L6-AS1Q8NA97 138 aa16.14■□□□□ 0.17
PCDH8-202ENST00000377942 VPS25Q9BRG1 176 aa16.14■□□□□ 0.17
PCDH8-202ENST00000377942 C1QTNF9BB2RNN3 333 aa16.14■□□□□ 0.17
PCDH8-202ENST00000377942 CD5P06127 495 aa16.14■□□□□ 0.17
PCDH8-202ENST00000377942 C1QTNF9P0C862 333 aa16.14■□□□□ 0.17
PCDH8-202ENST00000377942 TCF15Q12870 199 aa16.14■□□□□ 0.17
PCDH8-202ENST00000377942 RNF151Q2KHN1 245 aa16.14■□□□□ 0.17
PCDH8-202ENST00000377942 TMEM14EPQ6UXP3 125 aa16.14■□□□□ 0.17
PCDH8-202ENST00000377942 PCNX2A6NKB5 2137 aa16.14■□□□□ 0.17
PCDH8-202ENST00000377942 OR4C46A6NHA9 309 aa16.14■□□□□ 0.17
PCDH8-202ENST00000377942 TMEM136Q6ZRR5 245 aa16.14■□□□□ 0.17
PCDH8-202ENST00000377942 TDGF1P13385 188 aa16.13■□□□□ 0.17
PCDH8-202ENST00000377942 TNFRSF18Q9Y5U5 241 aa16.13■□□□□ 0.17
PCDH8-202ENST00000377942 CBY3A6NI87 242 aa16.13■□□□□ 0.17
PCDH8-202ENST00000377942 A6NNC1 897 aa16.13■□□□□ 0.17
PCDH8-202ENST00000377942 IGLV1-44P01699 117 aa16.13■□□□□ 0.17
PCDH8-202ENST00000377942 CBLN1P23435 193 aa16.13■□□□□ 0.17
PCDH8-202ENST00000377942 LINC01587Q99440 93 aa16.13■□□□□ 0.17
PCDH8-202ENST00000377942 TRGV9Q99603 122 aa16.13■□□□□ 0.17
PCDH8-202ENST00000377942 SRSF8Q9BRL6 282 aaKnown RBP16.13■□□□□ 0.17
PCDH8-202ENST00000377942 GGTLC1Q9BX51 225 aa16.13■□□□□ 0.17
PCDH8-202ENST00000377942 TMEM238LA0A1B0GVL6 79 aa16.13■□□□□ 0.17
PCDH8-202ENST00000377942 A6NJY4 79 aa16.13■□□□□ 0.17
PCDH8-202ENST00000377942 WFDC1Q9HC57 220 aa16.13■□□□□ 0.17
PCDH8-202ENST00000377942 DCAF16Q9NXF7 216 aa16.13■□□□□ 0.17
PCDH8-202ENST00000377942 C15orf32Q32M92 178 aa16.12■□□□□ 0.17
PCDH8-202ENST00000377942 PRELID3AQ96N28 172 aa16.12■□□□□ 0.17
PCDH8-202ENST00000377942 SIGLEC9Q9Y336 463 aa16.12■□□□□ 0.17
PCDH8-202ENST00000377942 SLC17A3O00476 420 aa16.12■□□□□ 0.17
PCDH8-202ENST00000377942 OVOL1O14753 267 aa16.12■□□□□ 0.17
PCDH8-202ENST00000377942 CDX1P47902 265 aaPredicted RBP16.12■□□□□ 0.17
PCDH8-202ENST00000377942 LINC00473A8K010 186 aa16.12■□□□□ 0.17
PCDH8-202ENST00000377942 IZUMO1RA6ND01 250 aa16.11■□□□□ 0.17
PCDH8-202ENST00000377942 RPL23P62829 140 aaKnown RBP16.11■□□□□ 0.17
PCDH8-202ENST00000377942 RSPO3Q9BXY4 272 aaPredicted RBP16.11■□□□□ 0.17
PCDH8-202ENST00000377942 FAM215AQ9Y5M1 114 aa16.11■□□□□ 0.17
PCDH8-202ENST00000377942 OSTCQ9NRP0 149 aa16.11■□□□□ 0.17
PCDH8-202ENST00000377942 F11RQ9Y624 299 aaKnown RBP16.11■□□□□ 0.17
PCDH8-202ENST00000377942 RNASE4P34096 147 aaKnown RBP16.11■□□□□ 0.17
PCDH8-202ENST00000377942 STHQ8IWL8 128 aa16.11■□□□□ 0.17
PCDH8-202ENST00000377942 BEND2Q8NDZ0 799 aa16.11■□□□□ 0.17
PCDH8-202ENST00000377942 PYYP10082 97 aa16.11■□□□□ 0.17
PCDH8-202ENST00000377942 REC114Q7Z4M0 266 aa16.11■□□□□ 0.17
PCDH8-202ENST00000377942 TMEM219Q86XT9 240 aa16.11■□□□□ 0.17
PCDH8-202ENST00000377942 USMG5Q96IX5 58 aa16.11■□□□□ 0.17
PCDH8-202ENST00000377942 PSG8Q9UQ74 426 aa16.11■□□□□ 0.17
PCDH8-202ENST00000377942 TRAV21A0A0B4J279 112 aa16.1■□□□□ 0.17
PCDH8-202ENST00000377942 STAG3L2P0CL84 134 aa16.1■□□□□ 0.17
PCDH8-202ENST00000377942 STAG3L3P0CL85 134 aa16.1■□□□□ 0.17
PCDH8-202ENST00000377942 TRBV7-1A0A0A6YYK4 115 aa16.1■□□□□ 0.17
PCDH8-202ENST00000377942 E9PQ18 207 aa16.1■□□□□ 0.17
PCDH8-202ENST00000377942 IGFL2Q6UWQ7 119 aa16.1■□□□□ 0.17
PCDH8-202ENST00000377942 BRD3OSQ6XYD6 125 aa16.1■□□□□ 0.17
PCDH8-202ENST00000377942 COPS9Q8WXC6 57 aa16.1■□□□□ 0.17
PCDH8-202ENST00000377942 GEMIN7Q9H840 131 aaKnown RBP16.09■□□□□ 0.17
PCDH8-202ENST00000377942 ZNF98A6NK75 572 aa16.09■□□□□ 0.17
PCDH8-202ENST00000377942 LINC00527Q9UJ94 153 aa16.09■□□□□ 0.17
PCDH8-202ENST00000377942 TRAV1-1A0A0B4J248 108 aa16.09■□□□□ 0.17
PCDH8-202ENST00000377942 CRXO43186 299 aaPredicted RBP16.09■□□□□ 0.17
PCDH8-202ENST00000377942 ZNF524Q96C55 264 aa16.09■□□□□ 0.17
PCDH8-202ENST00000377942 LY6HO94772 140 aa16.09■□□□□ 0.17
PCDH8-202ENST00000377942 WISP1O95388 367 aa16.09■□□□□ 0.17
PCDH8-202ENST00000377942 CFHR2P36980 270 aa16.09■□□□□ 0.17
PCDH8-202ENST00000377942 FER1L5A0AVI2 2057 aa16.09■□□□□ 0.17
PCDH8-202ENST00000377942 TP53BP1Q12888 1972 aaPredicted RBP16.08■□□□□ 0.17
PCDH8-202ENST00000377942 SIGLEC15Q6ZMC9 328 aa16.08■□□□□ 0.17
PCDH8-202ENST00000377942 PSG1P11464 419 aa16.08■□□□□ 0.16
PCDH8-202ENST00000377942 GPR61Q9BZJ8 451 aa16.08■□□□□ 0.16
PCDH8-202ENST00000377942 HELZP42694 1942 aaKnown RBP16.08■□□□□ 0.16
PCDH8-202ENST00000377942 IGLV3-9A0A075B6K5 115 aa16.08■□□□□ 0.16
PCDH8-202ENST00000377942 GRIFINA4D1Z8 144 aa16.08■□□□□ 0.16
PCDH8-202ENST00000377942 MSMBP08118 114 aa16.08■□□□□ 0.16
PCDH8-202ENST00000377942 Q6ZR03 302 aa16.08■□□□□ 0.16
PCDH8-202ENST00000377942 ZNF581Q9P0T4 197 aa16.08■□□□□ 0.16
PCDH8-202ENST00000377942 TRAV3A0A0B4J244 114 aa16.08■□□□□ 0.16
PCDH8-202ENST00000377942 UBE2E1P51965 193 aa16.08■□□□□ 0.16
PCDH8-202ENST00000377942 GNG5P63218 68 aa16.08■□□□□ 0.16
PCDH8-202ENST00000377942 CIRBPQ14011 172 aaKnown RBP16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms