RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 SSX2Q16385 188 aa6.93□□□□□ -1.3
TPM3-213ENST00000368545 LRRC75BQ2VPJ9 315 aa6.93□□□□□ -1.3
TPM3-213ENST00000368545 PPP1R27Q86WC6 154 aa6.93□□□□□ -1.3
TPM3-213ENST00000368545 OR2G3Q8NGZ4 309 aa6.93□□□□□ -1.3
TPM3-213ENST00000368545 OR2T10Q8NGZ9 312 aa6.93□□□□□ -1.3
TPM3-213ENST00000368545 WDR61Q9GZS3 305 aaKnown RBP6.93□□□□□ -1.3
TPM3-213ENST00000368545 UBE2L5PA0A1B0GUS4 154 aa6.92□□□□□ -1.3
TPM3-213ENST00000368545 A0A1W2PRD5 423 aa6.92□□□□□ -1.3
TPM3-213ENST00000368545 A0A1W2PRF3 423 aa6.92□□□□□ -1.3
TPM3-213ENST00000368545 A0A1W2PRM7 423 aa6.92□□□□□ -1.3
TPM3-213ENST00000368545 NBR2O15453 112 aa6.92□□□□□ -1.3
TPM3-213ENST00000368545 NDUFA3O95167 84 aa6.92□□□□□ -1.3
TPM3-213ENST00000368545 IGKV1D-33P01593 117 aa6.92□□□□□ -1.3
TPM3-213ENST00000368545 IGKV1-33P01594 117 aa6.92□□□□□ -1.3
TPM3-213ENST00000368545 SNCAP37840 140 aa6.92□□□□□ -1.3
TPM3-213ENST00000368545 DLK1P80370 383 aa6.92□□□□□ -1.3
TPM3-213ENST00000368545 EBI3Q14213 229 aa6.92□□□□□ -1.3
TPM3-213ENST00000368545 MMDQ15546 238 aa6.92□□□□□ -1.3
TPM3-213ENST00000368545 PRSS8Q16651 343 aa6.92□□□□□ -1.3
TPM3-213ENST00000368545 BSXQ3C1V8 233 aa6.92□□□□□ -1.3
TPM3-213ENST00000368545 C2orf83Q53S99 150 aa6.92□□□□□ -1.3
TPM3-213ENST00000368545 FAM120AOSQ5T036 256 aa6.92□□□□□ -1.3
TPM3-213ENST00000368545 DPPA3Q6W0C5 159 aa6.92□□□□□ -1.3
TPM3-213ENST00000368545 HSD17B13Q7Z5P4 300 aaPredicted RBP6.92□□□□□ -1.3
TPM3-213ENST00000368545 NPBQ8NG41 125 aa6.92□□□□□ -1.3
TPM3-213ENST00000368545 SH3BGRL3Q9H299 93 aa6.92□□□□□ -1.3
TPM3-213ENST00000368545 PARP11Q9NR21 331 aa6.92□□□□□ -1.3
TPM3-213ENST00000368545 METTL1Q9UBP6 276 aaKnown RBP6.92□□□□□ -1.3
TPM3-213ENST00000368545 TIMM9Q9Y5J7 89 aa6.92□□□□□ -1.3
TPM3-213ENST00000368545 MXRA5Q9NR99 2828 aa6.92□□□□□ -1.3
TPM3-213ENST00000368545 PRSS46E5RG02 174 aa6.92□□□□□ -1.3
TPM3-213ENST00000368545 FNDC10F2Z333 226 aa6.92□□□□□ -1.3
TPM3-213ENST00000368545 NPFFO15130 113 aa6.92□□□□□ -1.3
TPM3-213ENST00000368545 SOX15O60248 233 aa6.92□□□□□ -1.3
TPM3-213ENST00000368545 MPDU1O75352 247 aa6.92□□□□□ -1.3
TPM3-213ENST00000368545 IFNA4P05014 189 aa6.92□□□□□ -1.3
TPM3-213ENST00000368545 BRS3P32247 399 aa6.92□□□□□ -1.3
TPM3-213ENST00000368545 SAA4P35542 130 aa6.92□□□□□ -1.3
TPM3-213ENST00000368545 SERF2P84101 59 aa6.92□□□□□ -1.3
TPM3-213ENST00000368545 PLGLAQ15195 96 aa6.92□□□□□ -1.3
TPM3-213ENST00000368545 AKR1C8PQ5T2L2 129 aa6.92□□□□□ -1.3
TPM3-213ENST00000368545 Q6YL49 198 aa6.92□□□□□ -1.3
TPM3-213ENST00000368545 TAF15Q92804 592 aaKnown RBP eCLIP6.92□□□□□ -1.3
TPM3-213ENST00000368545 RBMXL1Q96E39 390 aaKnown RBP6.92□□□□□ -1.3
TPM3-213ENST00000368545 TACC2O95359 2948 aa6.91□□□□□ -1.3
TPM3-213ENST00000368545 CENPVL3A0A0U1RRI6 287 aa6.91□□□□□ -1.3
TPM3-213ENST00000368545 C17orf112F2Z3M2 114 aa6.91□□□□□ -1.3
TPM3-213ENST00000368545 CA2P00918 260 aa6.91□□□□□ -1.3
TPM3-213ENST00000368545 PRH1P02810 166 aa6.91□□□□□ -1.3
TPM3-213ENST00000368545 OPN1MWP04001 364 aa6.91□□□□□ -1.3
TPM3-213ENST00000368545 OPN1MW2P0DN77 364 aa6.91□□□□□ -1.3
TPM3-213ENST00000368545 OPN1MW3P0DN78 364 aa6.91□□□□□ -1.3
TPM3-213ENST00000368545 MYOD1P15172 320 aa6.91□□□□□ -1.3
TPM3-213ENST00000368545 CNTFRP26992 372 aa6.91□□□□□ -1.3
TPM3-213ENST00000368545 RPL27AP46776 148 aaKnown RBP6.91□□□□□ -1.3
TPM3-213ENST00000368545 SUB1P53999 127 aaKnown RBP eCLIP6.91□□□□□ -1.34e-7■□□□□ 9
TPM3-213ENST00000368545 RUNX1Q01196 453 aa6.91□□□□□ -1.3
TPM3-213ENST00000368545 RELQ04864 619 aaPredicted RBP6.91□□□□□ -1.3
TPM3-213ENST00000368545 HES1Q14469 280 aa6.91□□□□□ -1.3
TPM3-213ENST00000368545 TNXAQ16473 311 aa6.91□□□□□ -1.3
TPM3-213ENST00000368545 PXDC1Q5TGL8 231 aa6.91□□□□□ -1.3
TPM3-213ENST00000368545 Q6ZRG5 221 aa6.91□□□□□ -1.3
TPM3-213ENST00000368545 EIF4E3Q8N5X7 224 aaKnown RBP6.91□□□□□ -1.3
TPM3-213ENST00000368545 VPS13CQ709C8 3753 aa6.91□□□□□ -1.3
TPM3-213ENST00000368545 A0A096LNT2 108 aa6.91□□□□□ -1.3
TPM3-213ENST00000368545 IGHV1-69DA0A0B4J2H0 117 aa6.91□□□□□ -1.3
TPM3-213ENST00000368545 MFSD2BA6NFX1 497 aa6.91□□□□□ -1.3
TPM3-213ENST00000368545 TGFAP01135 160 aa6.91□□□□□ -1.3
TPM3-213ENST00000368545 IGHV1-69P01742 117 aa6.91□□□□□ -1.3
TPM3-213ENST00000368545 FAM106CPP0CH98 169 aa6.91□□□□□ -1.3
TPM3-213ENST00000368545 RNASE2P10153 161 aaKnown RBP6.91□□□□□ -1.3
TPM3-213ENST00000368545 FGF7P21781 194 aa6.91□□□□□ -1.3
TPM3-213ENST00000368545 MRGPRG-AS1Q2M3A8 158 aa6.91□□□□□ -1.3
TPM3-213ENST00000368545 ASPHD1Q5U4P2 390 aa6.91□□□□□ -1.3
TPM3-213ENST00000368545 IL34Q6ZMJ4 242 aa6.91□□□□□ -1.3
TPM3-213ENST00000368545 RSG1Q9BU20 258 aa6.91□□□□□ -1.3
TPM3-213ENST00000368545 FBXL15Q9H469 300 aa6.91□□□□□ -1.3
TPM3-213ENST00000368545 WDR83OSQ9Y284 106 aa6.91□□□□□ -1.3
TPM3-213ENST00000368545 TRAV40A0A0B4J280 105 aa6.9□□□□□ -1.3
TPM3-213ENST00000368545 RAB19A4D1S5 217 aa6.9□□□□□ -1.3
TPM3-213ENST00000368545 IGHV4-31P0DP07 118 aa6.9□□□□□ -1.3
TPM3-213ENST00000368545 MDKP21741 143 aaPredicted RBP6.9□□□□□ -1.3
TPM3-213ENST00000368545 SRP14P37108 136 aaKnown RBP6.9□□□□□ -1.3
TPM3-213ENST00000368545 PJVKQ0ZLH3 352 aa6.9□□□□□ -1.3
TPM3-213ENST00000368545 GAMTQ14353 236 aa6.9□□□□□ -1.3
TPM3-213ENST00000368545 ZNF124Q15973 351 aa6.9□□□□□ -1.3
TPM3-213ENST00000368545 DYNAPQ8N1N2 210 aa6.9□□□□□ -1.3
TPM3-213ENST00000368545 COMMD1Q8N668 190 aa6.9□□□□□ -1.3
TPM3-213ENST00000368545 Q8N6K4 173 aa6.9□□□□□ -1.3
TPM3-213ENST00000368545 ZNF709Q8N972 641 aa6.9□□□□□ -1.3
TPM3-213ENST00000368545 ZNF114Q8NC26 417 aa6.9□□□□□ -1.3
TPM3-213ENST00000368545 LYPD6BQ8NI32 183 aa6.9□□□□□ -1.3
TPM3-213ENST00000368545 NPCDR1Q9BY65 106 aa6.9□□□□□ -1.3
TPM3-213ENST00000368545 KCNIP2Q9NS61 270 aa6.9□□□□□ -1.3
TPM3-213ENST00000368545 HIF1ANQ9NWT6 349 aa6.9□□□□□ -1.3
TPM3-213ENST00000368545 C1RLQ9NZP8 487 aa6.9□□□□□ -1.3
TPM3-213ENST00000368545 FBXO7Q9Y3I1 522 aa6.9□□□□□ -1.3
TPM3-213ENST00000368545 SMCO3A2RU48 225 aa6.89□□□□□ -1.31
TPM3-213ENST00000368545 E7EUB6 86 aa6.89□□□□□ -1.31
TPM3-213ENST00000368545 J3QLI3 93 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms