RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 A0A1B0GV90 55 aa10.91□□□□□ -0.66
SCN8A-202ENST00000355133 SERF1AO75920 110 aa10.91□□□□□ -0.66
SCN8A-202ENST00000355133 IGHV1-8P0DP01 117 aa10.91□□□□□ -0.66
SCN8A-202ENST00000355133 Q9UFV3 132 aa10.91□□□□□ -0.66
SCN8A-202ENST00000355133 RPUSD1Q9UJJ7 312 aaKnown RBP10.91□□□□□ -0.66
SCN8A-202ENST00000355133 SRRM5B3KS81 715 aa10.91□□□□□ -0.66
SCN8A-202ENST00000355133 DSCR9P59020 149 aa10.91□□□□□ -0.66
SCN8A-202ENST00000355133 C15orf32Q32M92 178 aa10.91□□□□□ -0.66
SCN8A-202ENST00000355133 LY6G6FQ5SQ64 297 aa10.91□□□□□ -0.66
SCN8A-202ENST00000355133 NUDT10Q8NFP7 164 aa10.91□□□□□ -0.66
SCN8A-202ENST00000355133 IGKV1-27A0A075B6S5 117 aa10.91□□□□□ -0.66
SCN8A-202ENST00000355133 H0YIZ8 118 aa10.91□□□□□ -0.66
SCN8A-202ENST00000355133 NAPSAO96009 420 aa10.91□□□□□ -0.66
SCN8A-202ENST00000355133 A0A087WWC5 75 aa10.91□□□□□ -0.66
SCN8A-202ENST00000355133 TMEM178BH3BS89 294 aa10.91□□□□□ -0.66
SCN8A-202ENST00000355133 CD177Q8N6Q3 437 aa10.91□□□□□ -0.66
SCN8A-202ENST00000355133 TNFRSF14Q92956 283 aa10.91□□□□□ -0.66
SCN8A-202ENST00000355133 TRAV9-1A0A075B6T8 112 aa10.9□□□□□ -0.66
SCN8A-202ENST00000355133 IGKV2-40A0A087WW87 121 aaPredicted RBP10.9□□□□□ -0.66
SCN8A-202ENST00000355133 IL18BPO95998 194 aa10.9□□□□□ -0.66
SCN8A-202ENST00000355133 IGKV2D-40P01614 121 aaPredicted RBP10.9□□□□□ -0.66
SCN8A-202ENST00000355133 CRPP02741 224 aa10.9□□□□□ -0.66
SCN8A-202ENST00000355133 NEUROG3Q9Y4Z2 214 aa10.9□□□□□ -0.66
SCN8A-202ENST00000355133 A0A1B0GWB2 263 aa10.9□□□□□ -0.66
SCN8A-202ENST00000355133 MBNL3Q9NUK0 354 aaKnown RBP10.9□□□□□ -0.66
SCN8A-202ENST00000355133 TRGV11A0A075B6L2 103 aa10.9□□□□□ -0.66
SCN8A-202ENST00000355133 ID3Q02535 119 aa10.9□□□□□ -0.66
SCN8A-202ENST00000355133 SLC25A15Q9Y619 301 aa10.9□□□□□ -0.66
SCN8A-202ENST00000355133 IGHV1-3A0A0C4DH29 117 aa10.9□□□□□ -0.66
SCN8A-202ENST00000355133 PSPNO60542 156 aa10.9□□□□□ -0.66
SCN8A-202ENST00000355133 ERVK11-1P61568 191 aa10.9□□□□□ -0.66
SCN8A-202ENST00000355133 SRSF1Q07955 248 aaKnown RBP eCLIP10.9□□□□□ -0.66
SCN8A-202ENST00000355133 SFTA2Q6UW10 78 aa10.9□□□□□ -0.66
SCN8A-202ENST00000355133 ATRAIDQ6UW56 229 aa10.9□□□□□ -0.66
SCN8A-202ENST00000355133 C1QL4Q86Z23 238 aa10.9□□□□□ -0.66
SCN8A-202ENST00000355133 KLHDC3Q9BQ90 382 aa10.9□□□□□ -0.66
SCN8A-202ENST00000355133 CHCHD5Q9BSY4 110 aa10.9□□□□□ -0.66
SCN8A-202ENST00000355133 SEPSECSQ9HD40 501 aaKnown RBP10.9□□□□□ -0.66
SCN8A-202ENST00000355133 NPIPB5A8MRT5 1133 aa10.9□□□□□ -0.67
SCN8A-202ENST00000355133 CA1P00915 261 aaPredicted RBP10.9□□□□□ -0.67
SCN8A-202ENST00000355133 TPTE2P1Q5T6R2 138 aa10.9□□□□□ -0.67
SCN8A-202ENST00000355133 OCC1Q8TAD7 63 aa10.9□□□□□ -0.67
SCN8A-202ENST00000355133 COQ2Q96H96 371 aa10.9□□□□□ -0.67
SCN8A-202ENST00000355133 CHD5Q8TDI0 1954 aa10.89□□□□□ -0.67
SCN8A-202ENST00000355133 LINC00614P0C842 121 aa10.89□□□□□ -0.67
SCN8A-202ENST00000355133 CD28P10747 220 aa10.89□□□□□ -0.67
SCN8A-202ENST00000355133 TRAV12-3A0A0B4J271 114 aa10.89□□□□□ -0.67
SCN8A-202ENST00000355133 A0A1W2PRE2 83 aa10.89□□□□□ -0.67
SCN8A-202ENST00000355133 A8MXK9 166 aa10.89□□□□□ -0.67
SCN8A-202ENST00000355133 C10orf126Q8N4M7 172 aa10.89□□□□□ -0.67
SCN8A-202ENST00000355133 DEFB104AQ8WTQ1 72 aa10.89□□□□□ -0.67
SCN8A-202ENST00000355133 NRN1Q9NPD7 142 aa10.89□□□□□ -0.67
SCN8A-202ENST00000355133 RTTNQ86VV8 2226 aa10.89□□□□□ -0.67
SCN8A-202ENST00000355133 IGHV3-73A0A0B4J1V6 119 aa10.89□□□□□ -0.67
SCN8A-202ENST00000355133 H3BUX3 64 aa10.89□□□□□ -0.67
SCN8A-202ENST00000355133 UNQ6494/PRO21346Q6UXR6 183 aa10.89□□□□□ -0.67
SCN8A-202ENST00000355133 OVOL1O14753 267 aa10.89□□□□□ -0.67
SCN8A-202ENST00000355133 ESPL1Q14674 2120 aa10.89□□□□□ -0.67
SCN8A-202ENST00000355133 BEND2Q8NDZ0 799 aa10.89□□□□□ -0.67
SCN8A-202ENST00000355133 A0A0U1RRA0 63 aa10.89□□□□□ -0.67
SCN8A-202ENST00000355133 FAM90A9PA6NNJ1 464 aa10.89□□□□□ -0.67
SCN8A-202ENST00000355133 PRR31Q5SQ13 230 aa10.89□□□□□ -0.67
SCN8A-202ENST00000355133 SPATA31B1PQ5VZV4 182 aa10.89□□□□□ -0.67
SCN8A-202ENST00000355133 VGLL1Q99990 258 aa10.89□□□□□ -0.67
SCN8A-202ENST00000355133 F8VVB4 439 aa10.88□□□□□ -0.67
SCN8A-202ENST00000355133 F8VWA3 439 aa10.88□□□□□ -0.67
SCN8A-202ENST00000355133 C5orf24Q7Z6I8 188 aa10.88□□□□□ -0.67
SCN8A-202ENST00000355133 OR9G4Q8NGQ1 327 aa10.88□□□□□ -0.67
SCN8A-202ENST00000355133 IGHV3-64A0A075B6Q5 118 aa10.88□□□□□ -0.67
SCN8A-202ENST00000355133 PMS2P5A8MQ11 134 aa10.88□□□□□ -0.67
SCN8A-202ENST00000355133 GZMBP10144 247 aa10.88□□□□□ -0.67
SCN8A-202ENST00000355133 KLF17Q5JT82 389 aaPredicted RBP10.88□□□□□ -0.67
SCN8A-202ENST00000355133 TREML4Q6UXN2 200 aa10.88□□□□□ -0.67
SCN8A-202ENST00000355133 HEPN1Q6WQI6 88 aa10.88□□□□□ -0.67
SCN8A-202ENST00000355133 CYSLTR1Q9Y271 337 aa10.88□□□□□ -0.67
SCN8A-202ENST00000355133 DOCK4Q8N1I0 1966 aa10.88□□□□□ -0.67
SCN8A-202ENST00000355133 PDCD11Q14690 1871 aaKnown RBP10.88□□□□□ -0.67
SCN8A-202ENST00000355133 C5orf63A6NC05 138 aa10.88□□□□□ -0.67
SCN8A-202ENST00000355133 CLPSP04118 112 aa10.88□□□□□ -0.67
SCN8A-202ENST00000355133 NDPQ00604 133 aa10.88□□□□□ -0.67
SCN8A-202ENST00000355133 LILRA1O75019 489 aa10.88□□□□□ -0.67
SCN8A-202ENST00000355133 DPH3P1Q9H4G8 78 aa10.88□□□□□ -0.67
SCN8A-202ENST00000355133 WDR83OSQ9Y284 106 aa10.88□□□□□ -0.67
SCN8A-202ENST00000355133 SIPA1L1O43166 1804 aa10.88□□□□□ -0.67
SCN8A-202ENST00000355133 TRAV3A0A0B4J244 114 aa10.87□□□□□ -0.67
SCN8A-202ENST00000355133 LY6HO94772 140 aa10.87□□□□□ -0.67
SCN8A-202ENST00000355133 FXYD7P58549 80 aa10.87□□□□□ -0.67
SCN8A-202ENST00000355133 DEFB121Q5J5C9 76 aa10.87□□□□□ -0.67
SCN8A-202ENST00000355133 CYB5R2Q6BCY4 276 aa10.87□□□□□ -0.67
SCN8A-202ENST00000355133 FAM166AQ6J272 317 aa10.87□□□□□ -0.67
SCN8A-202ENST00000355133 EXOC3-AS1Q8N2X6 119 aa10.87□□□□□ -0.67
SCN8A-202ENST00000355133 SCRT1Q9BWW7 348 aa10.87□□□□□ -0.67
SCN8A-202ENST00000355133 C11orf68Q9H3H3 251 aaKnown RBP10.87□□□□□ -0.67
SCN8A-202ENST00000355133 OSTCQ9NRP0 149 aa10.87□□□□□ -0.67
SCN8A-202ENST00000355133 DICER1Q9UPY3 1922 aaKnown RBP10.87□□□□□ -0.67
SCN8A-202ENST00000355133 B4DSR2 109 aa10.87□□□□□ -0.67
SCN8A-202ENST00000355133 IGHV4-39P01824 125 aa10.87□□□□□ -0.67
SCN8A-202ENST00000355133 PSG1P11464 419 aa10.87□□□□□ -0.67
SCN8A-202ENST00000355133 PRDM13Q9H4Q3 707 aa10.87□□□□□ -0.67
SCN8A-202ENST00000355133 SDK2Q58EX2 2172 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms