RNA–Protein interactions for RNA: ENST00000348962.6

PTPRO-202, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 5,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-202ENST00000348962 CLPSP04118 112 aa12.75□□□□□ -0.37
PTPRO-202ENST00000348962 GREB1Q4ZG55 1949 aa12.75□□□□□ -0.37
PTPRO-202ENST00000348962 FAM208BQ5VWN6 2430 aa12.75□□□□□ -0.37
PTPRO-202ENST00000348962 C5orf64Q2M2E5 130 aa12.75□□□□□ -0.37
PTPRO-202ENST00000348962 SIGLEC15Q6ZMC9 328 aa12.75□□□□□ -0.37
PTPRO-202ENST00000348962 BIVMQ86UB2 503 aa12.75□□□□□ -0.37
PTPRO-202ENST00000348962 LILRA1O75019 489 aa12.75□□□□□ -0.37
PTPRO-202ENST00000348962 CHD5Q8TDI0 1954 aa12.74□□□□□ -0.37
PTPRO-202ENST00000348962 ATP5G3P48201 142 aa12.74□□□□□ -0.37
PTPRO-202ENST00000348962 CD177Q8N6Q3 437 aa12.74□□□□□ -0.37
PTPRO-202ENST00000348962 MBNL3Q9NUK0 354 aaKnown RBP12.74□□□□□ -0.37
PTPRO-202ENST00000348962 C1QTNF9BB2RNN3 333 aa12.74□□□□□ -0.37
PTPRO-202ENST00000348962 RNF223E7ERA6 249 aa12.74□□□□□ -0.37
PTPRO-202ENST00000348962 C1QTNF9P0C862 333 aa12.74□□□□□ -0.37
PTPRO-202ENST00000348962 CD33P20138 364 aa12.74□□□□□ -0.37
PTPRO-202ENST00000348962 ID3Q02535 119 aa12.74□□□□□ -0.37
PTPRO-202ENST00000348962 SPATA45Q537H7 98 aa12.74□□□□□ -0.37
PTPRO-202ENST00000348962 ORMDL3Q8N138 153 aa12.74□□□□□ -0.37
PTPRO-202ENST00000348962 NOTCH2Q04721 2471 aa12.74□□□□□ -0.37
PTPRO-202ENST00000348962 A0A1W2PRE2 83 aa12.74□□□□□ -0.37
PTPRO-202ENST00000348962 CBLN1P23435 193 aa12.74□□□□□ -0.37
PTPRO-202ENST00000348962 Q5PR19 223 aa12.74□□□□□ -0.37
PTPRO-202ENST00000348962 TMEM160Q9NX00 188 aa12.74□□□□□ -0.37
PTPRO-202ENST00000348962 COL8A2P25067 703 aa12.73□□□□□ -0.37
PTPRO-202ENST00000348962 PRR30Q53SZ7 412 aaPredicted RBP12.73□□□□□ -0.37
PTPRO-202ENST00000348962 SLC25A48Q6ZT89 311 aaKnown RBP12.73□□□□□ -0.37
PTPRO-202ENST00000348962 USMG5Q96IX5 58 aa12.73□□□□□ -0.37
PTPRO-202ENST00000348962 ZNF646O15015 1829 aaPredicted RBP12.73□□□□□ -0.37
PTPRO-202ENST00000348962 PCNX1Q96RV3 2341 aa12.73□□□□□ -0.37
PTPRO-202ENST00000348962 PIP4P2Q8N4L2 257 aa12.73□□□□□ -0.37
PTPRO-202ENST00000348962 ARL6IP6Q8N6S5 226 aa12.73□□□□□ -0.37
PTPRO-202ENST00000348962 DOCK8Q8NF50 2099 aa12.73□□□□□ -0.37
PTPRO-202ENST00000348962 MPTX1A8MV57 137 aa12.73□□□□□ -0.37
PTPRO-202ENST00000348962 E7EQL1 145 aa12.73□□□□□ -0.37
PTPRO-202ENST00000348962 CRPP02741 224 aa12.73□□□□□ -0.37
PTPRO-202ENST00000348962 MALP21145 153 aa12.73□□□□□ -0.37
PTPRO-202ENST00000348962 TMEM42Q69YG0 159 aa12.73□□□□□ -0.37
PTPRO-202ENST00000348962 EPDR1Q9UM22 224 aa12.73□□□□□ -0.37
PTPRO-202ENST00000348962 MSMBP08118 114 aa12.73□□□□□ -0.37
PTPRO-202ENST00000348962 FABP2P12104 132 aa12.73□□□□□ -0.37
PTPRO-202ENST00000348962 OTX1P32242 354 aaPredicted RBP12.73□□□□□ -0.37
PTPRO-202ENST00000348962 FBLN7Q53RD9 439 aa12.73□□□□□ -0.37
PTPRO-202ENST00000348962 GCSAMLQ5JQS6 135 aa12.73□□□□□ -0.37
PTPRO-202ENST00000348962 UBE2DNLQ8IWF7 75 aa12.73□□□□□ -0.37
PTPRO-202ENST00000348962 RNF166Q96A37 237 aaPredicted RBP12.73□□□□□ -0.37
PTPRO-202ENST00000348962 TMEM50AO95807 157 aa12.72□□□□□ -0.37
PTPRO-202ENST00000348962 PRTN3P24158 256 aa12.72□□□□□ -0.37
PTPRO-202ENST00000348962 C10orf55Q5SWW7 151 aa12.72□□□□□ -0.37
PTPRO-202ENST00000348962 C18orf15Q96N68 181 aa12.72□□□□□ -0.37
PTPRO-202ENST00000348962 PSG8Q9UQ74 426 aa12.72□□□□□ -0.37
PTPRO-202ENST00000348962 SLC17A3O00476 420 aa12.72□□□□□ -0.37
PTPRO-202ENST00000348962 HOXA5P20719 270 aa12.72□□□□□ -0.37
PTPRO-202ENST00000348962 OR10J3Q5JRS4 329 aa12.72□□□□□ -0.37
PTPRO-202ENST00000348962 VGLL1Q99990 258 aa12.72□□□□□ -0.37
PTPRO-202ENST00000348962 J3QRE1 110 aa12.72□□□□□ -0.37
PTPRO-202ENST00000348962 CDX1P47902 265 aaPredicted RBP12.72□□□□□ -0.37
PTPRO-202ENST00000348962 UQCR10Q9UDW1 63 aa12.72□□□□□ -0.37
PTPRO-202ENST00000348962 WDR83OSQ9Y284 106 aa12.72□□□□□ -0.37
PTPRO-202ENST00000348962 HEATR1Q9H583 2144 aaKnown RBP12.72□□□□□ -0.37
PTPRO-202ENST00000348962 ERVK11-1P61568 191 aa12.72□□□□□ -0.37
PTPRO-202ENST00000348962 OR10W1Q8NGF6 305 aa12.72□□□□□ -0.37
PTPRO-202ENST00000348962 A6NNC1 897 aa12.71□□□□□ -0.37
PTPRO-202ENST00000348962 BUB1B-PAK6H3BSN5 160 aa12.71□□□□□ -0.37
PTPRO-202ENST00000348962 LY6HO94772 140 aa12.71□□□□□ -0.37
PTPRO-202ENST00000348962 CCL20P78556 96 aa12.71□□□□□ -0.37
PTPRO-202ENST00000348962 COL5A1-AS1Q5SY13 56 aa12.71□□□□□ -0.37
PTPRO-202ENST00000348962 KLHL30-AS1Q8NEE0 82 aa12.71□□□□□ -0.37
PTPRO-202ENST00000348962 GAFA1Q96PS6 74 aa12.71□□□□□ -0.37
PTPRO-202ENST00000348962 ST20Q9HBF5 79 aa12.71□□□□□ -0.37
PTPRO-202ENST00000348962 A0A087WV48 116 aa12.71□□□□□ -0.37
PTPRO-202ENST00000348962 A0A1B0GWJ7 208 aa12.71□□□□□ -0.37
PTPRO-202ENST00000348962 APOHP02749 345 aaPredicted RBP12.71□□□□□ -0.37
PTPRO-202ENST00000348962 RPLP1P05386 114 aaKnown RBP12.71□□□□□ -0.37
PTPRO-202ENST00000348962 TMEM190Q8WZ59 177 aa12.71□□□□□ -0.37
PTPRO-202ENST00000348962 CNTFRP26992 372 aa12.71□□□□□ -0.37
PTPRO-202ENST00000348962 SDHCQ99643 169 aaPredicted RBP12.71□□□□□ -0.37
PTPRO-202ENST00000348962 FREM3P0C091 2139 aa12.71□□□□□ -0.37
PTPRO-202ENST00000348962 TRBV7-1A0A0A6YYK4 115 aa12.71□□□□□ -0.38
PTPRO-202ENST00000348962 C1QTNF4Q9BXJ3 329 aa12.71□□□□□ -0.38
PTPRO-202ENST00000348962 ZFHX2Q9C0A1 2572 aaPredicted RBP12.71□□□□□ -0.38
PTPRO-202ENST00000348962 SCGB1A1P11684 91 aa12.7□□□□□ -0.38
PTPRO-202ENST00000348962 LCNL1Q6ZST4 164 aa12.7□□□□□ -0.38
PTPRO-202ENST00000348962 NEUROG1Q92886 237 aa12.7□□□□□ -0.38
PTPRO-202ENST00000348962 IFI27P40305 119 aaPredicted RBP12.7□□□□□ -0.38
PTPRO-202ENST00000348962 NR2C2APQ86WQ0 139 aa12.7□□□□□ -0.38
PTPRO-202ENST00000348962 TRAV8-6A0A0B4J262 113 aa12.7□□□□□ -0.38
PTPRO-202ENST00000348962 PYYP10082 97 aa12.7□□□□□ -0.38
PTPRO-202ENST00000348962 TRAV9-1A0A075B6T8 112 aa12.7□□□□□ -0.38
PTPRO-202ENST00000348962 A0A0A6YYD4 124 aa12.7□□□□□ -0.38
PTPRO-202ENST00000348962 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.7□□□□□ -0.38
PTPRO-202ENST00000348962 CD55P08174 381 aa12.7□□□□□ -0.38
PTPRO-202ENST00000348962 SRP19P09132 144 aaKnown RBP12.7□□□□□ -0.38
PTPRO-202ENST00000348962 MPZP25189 248 aa12.7□□□□□ -0.38
PTPRO-202ENST00000348962 CACNG7P62955 275 aa12.7□□□□□ -0.38
PTPRO-202ENST00000348962 PDCD11Q14690 1871 aaKnown RBP12.69□□□□□ -0.38
PTPRO-202ENST00000348962 IGKV1-27A0A075B6S5 117 aa12.69□□□□□ -0.38
PTPRO-202ENST00000348962 IGKV1D-8A0A087WSZ0 117 aa12.69□□□□□ -0.38
PTPRO-202ENST00000348962 VCX2Q9H322 139 aa12.69□□□□□ -0.38
PTPRO-202ENST00000348962 SAA4P35542 130 aa12.69□□□□□ -0.38
PTPRO-202ENST00000348962 GNG5P63218 68 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms