RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 LINC01551Q86U37 167 aa7.5□□□□□ -1.21
PRDM9-201ENST00000296682 PPP1R27Q86WC6 154 aa7.5□□□□□ -1.21
PRDM9-201ENST00000296682 BAGE3Q86Y29 109 aa7.5□□□□□ -1.21
PRDM9-201ENST00000296682 BAGE2Q86Y30 109 aa7.5□□□□□ -1.21
PRDM9-201ENST00000296682 IGHV1-3A0A0C4DH29 117 aa7.5□□□□□ -1.21
PRDM9-201ENST00000296682 ZNF705FA8MVS1 300 aaPredicted RBP7.5□□□□□ -1.21
PRDM9-201ENST00000296682 SCGB1D1O95968 90 aa7.5□□□□□ -1.21
PRDM9-201ENST00000296682 FABP1P07148 127 aa7.5□□□□□ -1.21
PRDM9-201ENST00000296682 ZNF705DP0CH99 300 aaPredicted RBP7.5□□□□□ -1.21
PRDM9-201ENST00000296682 ZNF705BP0CI00 300 aaPredicted RBP7.5□□□□□ -1.21
PRDM9-201ENST00000296682 C8orf88P0DMB2 117 aa7.5□□□□□ -1.21
PRDM9-201ENST00000296682 OR5AN1Q8NGI8 311 aa7.5□□□□□ -1.21
PRDM9-201ENST00000296682 SFRP2Q96HF1 295 aa7.5□□□□□ -1.21
PRDM9-201ENST00000296682 DCHS2Q6V1P9 2916 aa7.5□□□□□ -1.21
PRDM9-201ENST00000296682 IGHV3-49A0A0A0MS15 119 aa7.49□□□□□ -1.21
PRDM9-201ENST00000296682 CXorf65A6NEN9 183 aa7.49□□□□□ -1.21
PRDM9-201ENST00000296682 PRSS46E5RG02 174 aa7.49□□□□□ -1.21
PRDM9-201ENST00000296682 IGHV2-5P01817 119 aa7.49□□□□□ -1.21
PRDM9-201ENST00000296682 ECSCRQ19T08 205 aa7.49□□□□□ -1.21
PRDM9-201ENST00000296682 CDPF1Q6NVV7 123 aa7.49□□□□□ -1.21
PRDM9-201ENST00000296682 PDPNQ86YL7 162 aa7.49□□□□□ -1.21
PRDM9-201ENST00000296682 MMD2Q8IY49 270 aa7.49□□□□□ -1.21
PRDM9-201ENST00000296682 BET1LQ9NYM9 111 aa7.49□□□□□ -1.21
PRDM9-201ENST00000296682 SORL1Q92673 2214 aa7.49□□□□□ -1.21
PRDM9-201ENST00000296682 Q56UQ5 140 aa7.49□□□□□ -1.21
PRDM9-201ENST00000296682 ZNF596Q8TC21 504 aa7.49□□□□□ -1.21
PRDM9-201ENST00000296682 SRSF12Q8WXF0 261 aaKnown RBP7.49□□□□□ -1.21
PRDM9-201ENST00000296682 MS4A10Q96PG2 267 aa7.49□□□□□ -1.21
PRDM9-201ENST00000296682 WNT10AQ9GZT5 417 aa7.49□□□□□ -1.21
PRDM9-201ENST00000296682 NAT8BQ9UHF3 227 aa7.49□□□□□ -1.21
PRDM9-201ENST00000296682 TRBV20OR9-2A0A075B6H5 130 aa7.49□□□□□ -1.21
PRDM9-201ENST00000296682 BUB1B-PAK6H3BSN5 160 aa7.49□□□□□ -1.21
PRDM9-201ENST00000296682 RPL29P47914 159 aaKnown RBP7.49□□□□□ -1.21
PRDM9-201ENST00000296682 BPIFB3P59826 476 aa7.49□□□□□ -1.21
PRDM9-201ENST00000296682 ZNF833PQ6ZTB9 187 aa7.49□□□□□ -1.21
PRDM9-201ENST00000296682 SAMD10Q9BYL1 202 aa7.49□□□□□ -1.21
PRDM9-201ENST00000296682 JKAMPQ9P055 326 aa7.49□□□□□ -1.21
PRDM9-201ENST00000296682 WNK1Q9H4A3 2382 aa7.49□□□□□ -1.21
PRDM9-201ENST00000296682 A1L4Q6 167 aa7.48□□□□□ -1.21
PRDM9-201ENST00000296682 UBE2CO00762 179 aa7.48□□□□□ -1.21
PRDM9-201ENST00000296682 S100A8P05109 93 aa7.48□□□□□ -1.21
PRDM9-201ENST00000296682 FRMD6-AS1P0C7T7 363 aa7.48□□□□□ -1.21
PRDM9-201ENST00000296682 CMTM2Q8TAZ6 248 aa7.48□□□□□ -1.21
PRDM9-201ENST00000296682 PACRGQ96M98 296 aaPredicted RBP7.48□□□□□ -1.21
PRDM9-201ENST00000296682 GGACTQ9BVM4 153 aa7.48□□□□□ -1.21
PRDM9-201ENST00000296682 CTDSP1Q9GZU7 261 aa7.48□□□□□ -1.21
PRDM9-201ENST00000296682 NDUFA4L2Q9NRX3 87 aa7.48□□□□□ -1.21
PRDM9-201ENST00000296682 ABCA2Q9BZC7 2435 aa7.48□□□□□ -1.21
PRDM9-201ENST00000296682 SNURFLB1AK76 121 aa7.48□□□□□ -1.21
PRDM9-201ENST00000296682 NTF3P20783 257 aa7.48□□□□□ -1.21
PRDM9-201ENST00000296682 ZNF600Q6ZNG1 722 aa7.48□□□□□ -1.21
PRDM9-201ENST00000296682 RASL11BQ9BPW5 248 aa7.48□□□□□ -1.21
PRDM9-201ENST00000296682 TMEM167BQ9NRX6 74 aa7.48□□□□□ -1.21
PRDM9-201ENST00000296682 DPM3Q9P2X0 92 aa7.48□□□□□ -1.21
PRDM9-201ENST00000296682 AMMECR1Q9Y4X0 333 aaPredicted RBP7.48□□□□□ -1.21
PRDM9-201ENST00000296682 IGHV3-66A0A0C4DH42 116 aa7.48□□□□□ -1.21
PRDM9-201ENST00000296682 LGALS7P47929 136 aa7.48□□□□□ -1.21
PRDM9-201ENST00000296682 RUSC1-AS1Q66K80 236 aa7.48□□□□□ -1.21
PRDM9-201ENST00000296682 OR51M1Q9H341 326 aa7.48□□□□□ -1.21
PRDM9-201ENST00000296682 IGKV3-7A0A075B6H7 116 aa7.47□□□□□ -1.21
PRDM9-201ENST00000296682 CNN1P51911 297 aaKnown RBP7.47□□□□□ -1.21
PRDM9-201ENST00000296682 USF2Q15853 346 aaPredicted RBP7.47□□□□□ -1.21
PRDM9-201ENST00000296682 TMEM30BQ3MIR4 351 aa7.47□□□□□ -1.21
PRDM9-201ENST00000296682 FAM209BQ5JX69 171 aa7.47□□□□□ -1.21
PRDM9-201ENST00000296682 ZNF257Q9Y2Q1 563 aa7.47□□□□□ -1.21
PRDM9-201ENST00000296682 SIGLEC9Q9Y336 463 aa7.47□□□□□ -1.21
PRDM9-201ENST00000296682 TMSB15BA0A087X1C1 80 aa7.47□□□□□ -1.21
PRDM9-201ENST00000296682 TNFRSF13BO14836 293 aaPredicted RBP7.47□□□□□ -1.21
PRDM9-201ENST00000296682 GNG7O60262 68 aa7.47□□□□□ -1.21
PRDM9-201ENST00000296682 HYPMO75409 117 aa7.47□□□□□ -1.21
PRDM9-201ENST00000296682 FCGR2BP31994 310 aaPredicted RBP7.47□□□□□ -1.21
PRDM9-201ENST00000296682 CDX1P47902 265 aaPredicted RBP7.47□□□□□ -1.21
PRDM9-201ENST00000296682 POU2AF1Q16633 256 aa7.47□□□□□ -1.21
PRDM9-201ENST00000296682 TMEM177Q53S58 311 aa7.47□□□□□ -1.21
PRDM9-201ENST00000296682 ST6GALNAC3Q8NDV1 305 aa7.47□□□□□ -1.21
PRDM9-201ENST00000296682 TMEM167AQ8TBQ9 72 aa7.47□□□□□ -1.21
PRDM9-201ENST00000296682 ANAPC16Q96DE5 110 aa7.47□□□□□ -1.21
PRDM9-201ENST00000296682 DAZAP1Q96EP5 407 aaKnown RBP7.47□□□□□ -1.21
PRDM9-201ENST00000296682 C1orf159Q96HA4 380 aa7.47□□□□□ -1.21
PRDM9-201ENST00000296682 RBM14Q96PK6 669 aaKnown RBP7.47□□□□□ -1.21
PRDM9-201ENST00000296682 TCEAL7Q9BRU2 100 aa7.47□□□□□ -1.21
PRDM9-201ENST00000296682 CBLN4Q9NTU7 201 aa7.47□□□□□ -1.21
PRDM9-201ENST00000296682 TRAV8-1A0A0A6YYK1 113 aa7.47□□□□□ -1.21
PRDM9-201ENST00000296682 OR2J3O76001 311 aa7.47□□□□□ -1.21
PRDM9-201ENST00000296682 C2orf83Q53S99 150 aa7.47□□□□□ -1.21
PRDM9-201ENST00000296682 OR1L6Q8NGR2 347 aa7.47□□□□□ -1.21
PRDM9-201ENST00000296682 LSM4Q9Y4Z0 139 aaKnown RBP7.47□□□□□ -1.21
PRDM9-201ENST00000296682 MUC21A0A0G2JKD1 596 aa7.46□□□□□ -1.21
PRDM9-201ENST00000296682 MUC21A0A140T8X8 626 aa7.46□□□□□ -1.21
PRDM9-201ENST00000296682 LINC00587B1AMM8 73 aa7.46□□□□□ -1.21
PRDM9-201ENST00000296682 SEC14L6B5MCN3 397 aa7.46□□□□□ -1.21
PRDM9-201ENST00000296682 HOXA5P20719 270 aa7.46□□□□□ -1.21
PRDM9-201ENST00000296682 ZNF137PP52743 207 aa7.46□□□□□ -1.21
PRDM9-201ENST00000296682 MUC21Q5SSG8 566 aa7.46□□□□□ -1.21
PRDM9-201ENST00000296682 UNQ6494/PRO21346Q6UXR6 183 aa7.46□□□□□ -1.21
PRDM9-201ENST00000296682 CRYBG3Q68DQ2 2970 aa7.46□□□□□ -1.22
PRDM9-201ENST00000296682 FNDC10F2Z333 226 aa7.46□□□□□ -1.22
PRDM9-201ENST00000296682 ZNF207O43670 478 aaKnown RBP7.46□□□□□ -1.22
PRDM9-201ENST00000296682 FSTL3O95633 263 aa7.46□□□□□ -1.22
PRDM9-201ENST00000296682 PFN1P07737 140 aaKnown RBP7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms