RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 IGKV1D-12P01611 117 aa10.01□□□□□ -0.81
COL8A1-201ENST00000261037 GNLYP22749 145 aa10.01□□□□□ -0.81
COL8A1-201ENST00000261037 PRCDQ00LT1 54 aa10.01□□□□□ -0.81
COL8A1-201ENST00000261037 EFNB3Q15768 340 aa10.01□□□□□ -0.81
COL8A1-201ENST00000261037 Q6AWC8 147 aa10.01□□□□□ -0.81
COL8A1-201ENST00000261037 TRIOBPQ9H2D6 2365 aa10.01□□□□□ -0.81
COL8A1-201ENST00000261037 H3BUT2 72 aa10.01□□□□□ -0.81
COL8A1-201ENST00000261037 EFNA2O43921 213 aa10.01□□□□□ -0.81
COL8A1-201ENST00000261037 LY6G6FQ5SQ64 297 aa10.01□□□□□ -0.81
COL8A1-201ENST00000261037 ASCL2Q99929 193 aa10.01□□□□□ -0.81
COL8A1-201ENST00000261037 RIPPLY3P57055 190 aa10.01□□□□□ -0.81
COL8A1-201ENST00000261037 TMEM200BQ69YZ2 307 aa10.01□□□□□ -0.81
COL8A1-201ENST00000261037 C8orf46Q8TAG6 207 aa10.01□□□□□ -0.81
COL8A1-201ENST00000261037 A0A087WWC5 75 aa10□□□□□ -0.81
COL8A1-201ENST00000261037 TRAV21A0A0B4J279 112 aa10□□□□□ -0.81
COL8A1-201ENST00000261037 ZNF672Q499Z4 452 aaPredicted RBP10□□□□□ -0.81
COL8A1-201ENST00000261037 CHTOPQ9Y3Y2 248 aaKnown RBP10□□□□□ -0.81
COL8A1-201ENST00000261037 SCN5AQ14524 2016 aa10□□□□□ -0.81
COL8A1-201ENST00000261037 TRAV41A0A0B4J266 112 aa10□□□□□ -0.81
COL8A1-201ENST00000261037 CRPP02741 224 aa10□□□□□ -0.81
COL8A1-201ENST00000261037 BRD3OSQ6XYD6 125 aa10□□□□□ -0.81
COL8A1-201ENST00000261037 GGNQ86UU5 652 aa10□□□□□ -0.81
COL8A1-201ENST00000261037 DPH3P1Q9H4G8 78 aa10□□□□□ -0.81
COL8A1-201ENST00000261037 SEC16AO15027 2179 aa10□□□□□ -0.81
COL8A1-201ENST00000261037 H0YIZ8 118 aa10□□□□□ -0.81
COL8A1-201ENST00000261037 NAPSAO96009 420 aa10□□□□□ -0.81
COL8A1-201ENST00000261037 OCC1Q8TAD7 63 aa10□□□□□ -0.81
COL8A1-201ENST00000261037 SEPSECSQ9HD40 501 aaKnown RBP10□□□□□ -0.81
COL8A1-201ENST00000261037 A8MXK9 166 aa10□□□□□ -0.81
COL8A1-201ENST00000261037 E9PLN8 166 aa10□□□□□ -0.81
COL8A1-201ENST00000261037 IGKV1-27A0A075B6S5 117 aa10□□□□□ -0.81
COL8A1-201ENST00000261037 ERVK11-1P61568 191 aa10□□□□□ -0.81
COL8A1-201ENST00000261037 NDPQ00604 133 aa10□□□□□ -0.81
COL8A1-201ENST00000261037 Q0VFX4 171 aa10□□□□□ -0.81
COL8A1-201ENST00000261037 FNDC4Q9H6D8 234 aaPredicted RBP10□□□□□ -0.81
COL8A1-201ENST00000261037 IGLV3-32A0A0A0MS00 114 aa9.99□□□□□ -0.81
COL8A1-201ENST00000261037 ZNF815PA8K554 130 aa9.99□□□□□ -0.81
COL8A1-201ENST00000261037 SRSF1Q07955 248 aaKnown RBP eCLIP9.99□□□□□ -0.81
COL8A1-201ENST00000261037 GSN-AS1Q9NRJ2 163 aa9.99□□□□□ -0.81
COL8A1-201ENST00000261037 NHP2Q9NX24 153 aaKnown RBP9.99□□□□□ -0.81
COL8A1-201ENST00000261037 NPIPB5A8MRT5 1133 aa9.99□□□□□ -0.81
COL8A1-201ENST00000261037 J3QRE1 110 aa9.99□□□□□ -0.81
COL8A1-201ENST00000261037 DUSP14O95147 198 aaKnown RBP9.99□□□□□ -0.81
COL8A1-201ENST00000261037 PAX2Q02962 417 aa9.99□□□□□ -0.81
COL8A1-201ENST00000261037 EXOC3-AS1Q8N2X6 119 aa9.99□□□□□ -0.81
COL8A1-201ENST00000261037 CD177Q8N6Q3 437 aa9.99□□□□□ -0.81
COL8A1-201ENST00000261037 NEUROG3Q9Y4Z2 214 aa9.99□□□□□ -0.81
COL8A1-201ENST00000261037 TRAV3A0A0B4J244 114 aa9.99□□□□□ -0.81
COL8A1-201ENST00000261037 RPL35AP18077 110 aaKnown RBP9.99□□□□□ -0.81
COL8A1-201ENST00000261037 FOXL1Q12952 345 aa9.99□□□□□ -0.81
COL8A1-201ENST00000261037 NTN3O00634 580 aaPredicted RBP9.98□□□□□ -0.81
COL8A1-201ENST00000261037 CRYGSP22914 178 aa9.98□□□□□ -0.81
COL8A1-201ENST00000261037 CHCHD5Q9BSY4 110 aa9.98□□□□□ -0.81
COL8A1-201ENST00000261037 SCRT1Q9BWW7 348 aa9.98□□□□□ -0.81
COL8A1-201ENST00000261037 NCR2O95944 276 aa9.98□□□□□ -0.81
COL8A1-201ENST00000261037 IGHV3-53P01767 116 aa9.98□□□□□ -0.81
COL8A1-201ENST00000261037 IGFL4Q6B9Z1 124 aa9.98□□□□□ -0.81
COL8A1-201ENST00000261037 FAM89BQ8N5H3 189 aa9.98□□□□□ -0.81
COL8A1-201ENST00000261037 TMEM170AQ8WVE7 144 aa9.98□□□□□ -0.81
COL8A1-201ENST00000261037 MBNL3Q9NUK0 354 aaKnown RBP9.98□□□□□ -0.81
COL8A1-201ENST00000261037 C5orf63A6NC05 138 aa9.98□□□□□ -0.81
COL8A1-201ENST00000261037 ADARB2-AS1A8MUL3 147 aa9.98□□□□□ -0.81
COL8A1-201ENST00000261037 MST1P26927 711 aa9.98□□□□□ -0.81
COL8A1-201ENST00000261037 KLHDC3Q9BQ90 382 aa9.98□□□□□ -0.81
COL8A1-201ENST00000261037 RLFQ13129 1914 aa9.98□□□□□ -0.81
COL8A1-201ENST00000261037 CSRP1P21291 193 aaKnown RBP9.98□□□□□ -0.81
COL8A1-201ENST00000261037 OR9G4Q8NGQ1 327 aa9.98□□□□□ -0.81
COL8A1-201ENST00000261037 VGLL1Q99990 258 aa9.98□□□□□ -0.81
COL8A1-201ENST00000261037 TRAV9-1A0A075B6T8 112 aa9.98□□□□□ -0.81
COL8A1-201ENST00000261037 LILRA1O75019 489 aa9.98□□□□□ -0.81
COL8A1-201ENST00000261037 C15orf32Q32M92 178 aa9.98□□□□□ -0.81
COL8A1-201ENST00000261037 NABP1Q96AH0 204 aa9.98□□□□□ -0.81
COL8A1-201ENST00000261037 TRGV11A0A075B6L2 103 aa9.97□□□□□ -0.81
COL8A1-201ENST00000261037 HBDP02042 147 aa9.97□□□□□ -0.81
COL8A1-201ENST00000261037 NIT1Q86X76 327 aa9.97□□□□□ -0.81
COL8A1-201ENST00000261037 RFNGQ9Y644 331 aa9.97□□□□□ -0.81
COL8A1-201ENST00000261037 PMS2P5A8MQ11 134 aa9.97□□□□□ -0.81
COL8A1-201ENST00000261037 DOCK4Q8N1I0 1966 aa9.97□□□□□ -0.81
COL8A1-201ENST00000261037 IGHV1-3A0A0C4DH29 117 aa9.97□□□□□ -0.81
COL8A1-201ENST00000261037 DPM2O94777 84 aa9.97□□□□□ -0.81
COL8A1-201ENST00000261037 SRSF7Q16629 238 aaKnown RBP eCLIP9.97□□□□□ -0.81
COL8A1-201ENST00000261037 UBE2DNLQ8IWF7 75 aa9.97□□□□□ -0.81
COL8A1-201ENST00000261037 MDC1Q14676 2089 aaKnown RBP9.97□□□□□ -0.81
COL8A1-201ENST00000261037 F8VVB4 439 aa9.97□□□□□ -0.81
COL8A1-201ENST00000261037 F8VWA3 439 aa9.97□□□□□ -0.81
COL8A1-201ENST00000261037 IGHV1-8P0DP01 117 aa9.97□□□□□ -0.81
COL8A1-201ENST00000261037 HGFACQ04756 655 aa9.97□□□□□ -0.81
COL8A1-201ENST00000261037 KLF17Q5JT82 389 aaPredicted RBP9.97□□□□□ -0.81
COL8A1-201ENST00000261037 A0A0G2JNJ9 132 aa9.96□□□□□ -0.81
COL8A1-201ENST00000261037 C19orf67A6NJJ6 358 aa9.96□□□□□ -0.81
COL8A1-201ENST00000261037 CD300EQ496F6 205 aaPredicted RBP9.96□□□□□ -0.81
COL8A1-201ENST00000261037 TREML4Q6UXN2 200 aa9.96□□□□□ -0.81
COL8A1-201ENST00000261037 DMRTC2Q8IXT2 367 aaPredicted RBP9.96□□□□□ -0.81
COL8A1-201ENST00000261037 PRDM13Q9H4Q3 707 aa9.96□□□□□ -0.81
COL8A1-201ENST00000261037 Q9UFV3 132 aa9.96□□□□□ -0.81
COL8A1-201ENST00000261037 CYSLTR1Q9Y271 337 aa9.96□□□□□ -0.81
COL8A1-201ENST00000261037 TRAV8-2A0A0B4J237 113 aa9.96□□□□□ -0.81
COL8A1-201ENST00000261037 IGKCP01834 107 aa9.96□□□□□ -0.81
COL8A1-201ENST00000261037 TIMP3P35625 211 aa9.96□□□□□ -0.81
COL8A1-201ENST00000261037 RNF182Q8N6D2 247 aa9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms