RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 OTORQ9NRC9 128 aa15.19■□□□□ 0.02
CLIP2-201ENST00000223398 ZFHX2Q9C0A1 2572 aaPredicted RBP15.19■□□□□ 0.02
CLIP2-201ENST00000223398 IGKV1D-17A0A075B6S4 117 aa15.19■□□□□ 0.02
CLIP2-201ENST00000223398 LEPP41159 167 aa15.19■□□□□ 0.02
CLIP2-201ENST00000223398 SIGLEC15Q6ZMC9 328 aa15.19■□□□□ 0.02
CLIP2-201ENST00000223398 LCNL1Q6ZST4 164 aa15.19■□□□□ 0.02
CLIP2-201ENST00000223398 RPP21Q9H633 154 aaKnown RBP15.19■□□□□ 0.02
CLIP2-201ENST00000223398 ERVK11-1P61568 191 aa15.18■□□□□ 0.02
CLIP2-201ENST00000223398 NDPQ00604 133 aa15.18■□□□□ 0.02
CLIP2-201ENST00000223398 MINOS1Q5TGZ0 78 aa15.18■□□□□ 0.02
CLIP2-201ENST00000223398 MINOS1-NBL1R4GNA1 71 aa15.18■□□□□ 0.02
CLIP2-201ENST00000223398 TRGV4A0A0C4DH28 118 aa15.18■□□□□ 0.02
CLIP2-201ENST00000223398 HGFACQ04756 655 aa15.18■□□□□ 0.02
CLIP2-201ENST00000223398 NHLRC3Q5JS37 347 aa15.18■□□□□ 0.02
CLIP2-201ENST00000223398 PAPPA-AS1Q5QFB9 102 aa15.18■□□□□ 0.02
CLIP2-201ENST00000223398 RPL35AP18077 110 aaKnown RBP15.18■□□□□ 0.02
CLIP2-201ENST00000223398 MBNL3Q9NUK0 354 aaKnown RBP15.18■□□□□ 0.02
CLIP2-201ENST00000223398 ZNF581Q9P0T4 197 aa15.18■□□□□ 0.02
CLIP2-201ENST00000223398 IGKV3D-20A0A0C4DH25 116 aa15.18■□□□□ 0.02
CLIP2-201ENST00000223398 A0A1B0GUT8 65 aa15.18■□□□□ 0.02
CLIP2-201ENST00000223398 DUSP14O95147 198 aaKnown RBP15.18■□□□□ 0.02
CLIP2-201ENST00000223398 SAA4P35542 130 aa15.18■□□□□ 0.02
CLIP2-201ENST00000223398 DOCK7Q96N67 2140 aa15.18■□□□□ 0.02
CLIP2-201ENST00000223398 TRAV5A0A0B4J249 113 aa15.17■□□□□ 0.02
CLIP2-201ENST00000223398 LINC00205P59089 165 aa15.17■□□□□ 0.02
CLIP2-201ENST00000223398 CIARTQ8N365 385 aaPredicted RBP15.17■□□□□ 0.02
CLIP2-201ENST00000223398 KCNS1Q96KK3 526 aa15.17■□□□□ 0.02
CLIP2-201ENST00000223398 IMMP2LQ96T52 175 aa15.17■□□□□ 0.02
CLIP2-201ENST00000223398 TMEM70Q9BUB7 260 aa15.17■□□□□ 0.02
CLIP2-201ENST00000223398 TRAV3A0A0B4J244 114 aa15.17■□□□□ 0.02
CLIP2-201ENST00000223398 A6NNC1 897 aa15.17■□□□□ 0.02
CLIP2-201ENST00000223398 BUB1B-PAK6H3BSN5 160 aa15.17■□□□□ 0.02
CLIP2-201ENST00000223398 GLRX5Q86SX6 157 aa15.17■□□□□ 0.02
CLIP2-201ENST00000223398 MRAP2Q96G30 205 aa15.17■□□□□ 0.02
CLIP2-201ENST00000223398 ZNF257Q9Y2Q1 563 aa15.17■□□□□ 0.02
CLIP2-201ENST00000223398 PIP4P2Q8N4L2 257 aa15.17■□□□□ 0.02
CLIP2-201ENST00000223398 BEX4Q9NWD9 120 aaPredicted RBP15.17■□□□□ 0.02
CLIP2-201ENST00000223398 ZMAT5Q9UDW3 170 aaKnown RBP15.17■□□□□ 0.02
CLIP2-201ENST00000223398 LOC102724200A0A096LPH7 203 aaPredicted RBP15.17■□□□□ 0.02
CLIP2-201ENST00000223398 SAMD13Q5VXD3 122 aa15.17■□□□□ 0.02
CLIP2-201ENST00000223398 TDGF1P13385 188 aa15.16■□□□□ 0.02
CLIP2-201ENST00000223398 RIPPLY3P57055 190 aa15.16■□□□□ 0.02
CLIP2-201ENST00000223398 FABP5P3A8MUU1 101 aa15.16■□□□□ 0.02
CLIP2-201ENST00000223398 M0R1W7 72 aa15.16■□□□□ 0.02
CLIP2-201ENST00000223398 SLC25A48Q6ZT89 311 aaKnown RBP15.16■□□□□ 0.02
CLIP2-201ENST00000223398 RNF222A6NCQ9 220 aa15.16■□□□□ 0.02
CLIP2-201ENST00000223398 COX6CP09669 75 aa15.16■□□□□ 0.02
CLIP2-201ENST00000223398 FOLR2P14207 255 aa15.16■□□□□ 0.02
CLIP2-201ENST00000223398 TMEM238LA0A1B0GVL6 79 aa15.15■□□□□ 0.02
CLIP2-201ENST00000223398 A6NJY4 79 aa15.15■□□□□ 0.02
CLIP2-201ENST00000223398 ZNF415Q09FC8 603 aa15.15■□□□□ 0.02
CLIP2-201ENST00000223398 RNASE7Q9H1E1 156 aaKnown RBP15.15■□□□□ 0.02
CLIP2-201ENST00000223398 APOHP02749 345 aaPredicted RBP15.15■□□□□ 0.02
CLIP2-201ENST00000223398 HINT1P49773 126 aaPredicted RBP15.15■□□□□ 0.02
CLIP2-201ENST00000223398 FXYD7P58549 80 aa15.15■□□□□ 0.02
CLIP2-201ENST00000223398 ZNF688P0C7X2 276 aa15.15■□□□□ 0.02
CLIP2-201ENST00000223398 C5orf64Q2M2E5 130 aa15.15■□□□□ 0.02
CLIP2-201ENST00000223398 SCGB3A1Q96QR1 104 aa15.15■□□□□ 0.02
CLIP2-201ENST00000223398 MSMBP08118 114 aa15.14■□□□□ 0.01
CLIP2-201ENST00000223398 COQ2Q96H96 371 aa15.14■□□□□ 0.01
CLIP2-201ENST00000223398 LRTM2Q8N967 370 aa15.14■□□□□ 0.01
CLIP2-201ENST00000223398 GPR61Q9BZJ8 451 aa15.14■□□□□ 0.01
CLIP2-201ENST00000223398 TRAV8-6A0A0B4J262 113 aa15.14■□□□□ 0.01
CLIP2-201ENST00000223398 RNF126Q9BV68 326 aa15.14■□□□□ 0.01
CLIP2-201ENST00000223398 VENTXO95231 258 aa15.14■□□□□ 0.01
CLIP2-201ENST00000223398 IL36BQ9NZH7 164 aa15.14■□□□□ 0.01
CLIP2-201ENST00000223398 ZNRD1Q9P1U0 126 aa15.14■□□□□ 0.01
CLIP2-201ENST00000223398 H0YJW9 148 aa15.13■□□□□ 0.01
CLIP2-201ENST00000223398 BTCP35070 178 aa15.13■□□□□ 0.01
CLIP2-201ENST00000223398 EFNB1P98172 346 aa15.13■□□□□ 0.01
CLIP2-201ENST00000223398 TEX38Q6PEX7 206 aa15.13■□□□□ 0.01
CLIP2-201ENST00000223398 TCF15Q12870 199 aa15.13■□□□□ 0.01
CLIP2-201ENST00000223398 UBE2DNLQ8IWF7 75 aa15.13■□□□□ 0.01
CLIP2-201ENST00000223398 C2orf88Q9BSF0 95 aa15.13■□□□□ 0.01
CLIP2-201ENST00000223398 EPDR1Q9UM22 224 aa15.13■□□□□ 0.01
CLIP2-201ENST00000223398 PRB1P04280 392 aa15.13■□□□□ 0.01
CLIP2-201ENST00000223398 IGFL3Q6UXB1 125 aa15.13■□□□□ 0.01
CLIP2-201ENST00000223398 TRAV21A0A0B4J279 112 aa15.12■□□□□ 0.01
CLIP2-201ENST00000223398 PSG1P11464 419 aa15.12■□□□□ 0.01
CLIP2-201ENST00000223398 OR10J3Q5JRS4 329 aa15.12■□□□□ 0.01
CLIP2-201ENST00000223398 DTX1Q86Y01 620 aa15.12■□□□□ 0.01
CLIP2-201ENST00000223398 ASCL2Q99929 193 aa15.12■□□□□ 0.01
CLIP2-201ENST00000223398 PSG8Q9UQ74 426 aa15.12■□□□□ 0.01
CLIP2-201ENST00000223398 HIGD1CA8MV81 97 aa15.12■□□□□ 0.01
CLIP2-201ENST00000223398 TMEM50AO95807 157 aa15.12■□□□□ 0.01
CLIP2-201ENST00000223398 SRP19P09132 144 aaKnown RBP15.12■□□□□ 0.01
CLIP2-201ENST00000223398 GFI1BQ5VTD9 330 aa15.12■□□□□ 0.01
CLIP2-201ENST00000223398 ALKBH7Q9BT30 221 aaPredicted RBP15.12■□□□□ 0.01
CLIP2-201ENST00000223398 SMIM6P0DI80 62 aa15.12■□□□□ 0.01
CLIP2-201ENST00000223398 EFNB3Q15768 340 aa15.12■□□□□ 0.01
CLIP2-201ENST00000223398 Q6P435 159 aa15.12■□□□□ 0.01
CLIP2-201ENST00000223398 IGKV2-40A0A087WW87 121 aaPredicted RBP15.11■□□□□ 0.01
CLIP2-201ENST00000223398 TRBV9A0A0B4J1U6 114 aa15.11■□□□□ 0.01
CLIP2-201ENST00000223398 PMS2P5A8MQ11 134 aa15.11■□□□□ 0.01
CLIP2-201ENST00000223398 OOSP1A8MZH6 123 aa15.11■□□□□ 0.01
CLIP2-201ENST00000223398 IGKV2D-40P01614 121 aaPredicted RBP15.11■□□□□ 0.01
CLIP2-201ENST00000223398 CXorf65A6NEN9 183 aa15.11■□□□□ 0.01
CLIP2-201ENST00000223398 TMEM42Q69YG0 159 aa15.11■□□□□ 0.01
CLIP2-201ENST00000223398 C12orf54Q6X4T0 127 aa15.11■□□□□ 0.01
CLIP2-201ENST00000223398 ID3Q02535 119 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms