RNA–Protein interactions for RNA: ENSMUST00000070797.6

Pcdha1-201, Transcript of Protocadherin alpha 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Pcdha1, Length 5,248 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1-201ENSMUST00000070797 Hist1h2bcQ6ZWY9 126 aaKnown RBP12.76□□□□□ -0.37
Pcdha1-201ENSMUST00000070797 Cadm4Q8R464 388 aa12.76□□□□□ -0.37
Pcdha1-201ENSMUST00000070797 Olfr1370Q8VFG4 316 aa12.76□□□□□ -0.37
Pcdha1-201ENSMUST00000070797 Syt11Q9R0N3 430 aa12.76□□□□□ -0.37
Pcdha1-201ENSMUST00000070797 Ighv5-15A0A0A6YWC7 117 aa12.76□□□□□ -0.37
Pcdha1-201ENSMUST00000070797 Gm5741B2RVA4 72 aa12.76□□□□□ -0.37
Pcdha1-201ENSMUST00000070797 Ankrd65F6YK91 380 aa12.76□□□□□ -0.37
Pcdha1-201ENSMUST00000070797 P18524 117 aa12.76□□□□□ -0.37
Pcdha1-201ENSMUST00000070797 Klf16P58334 251 aa12.76□□□□□ -0.37
Pcdha1-201ENSMUST00000070797 Mpzl1Q3TEW6 270 aa12.76□□□□□ -0.37
Pcdha1-201ENSMUST00000070797 Zfp933Q6PEE4 468 aa12.76□□□□□ -0.37
Pcdha1-201ENSMUST00000070797 Smap2Q7TN29 428 aa12.76□□□□□ -0.37
Pcdha1-201ENSMUST00000070797 Slc16a4Q8R0M8 500 aa12.76□□□□□ -0.37
Pcdha1-201ENSMUST00000070797 Wwtr1Q9EPK5 395 aa12.76□□□□□ -0.37
Pcdha1-201ENSMUST00000070797 Marf1Q8BJ34 1730 aaKnown RBP12.76□□□□□ -0.37
Pcdha1-201ENSMUST00000070797 Igkv6-29A0A0G2JEI6 115 aa12.75□□□□□ -0.37
Pcdha1-201ENSMUST00000070797 Olfr1248A0A1L1SSZ5 307 aa12.75□□□□□ -0.37
Pcdha1-201ENSMUST00000070797 JPT1P97825 154 aaKnown RBP12.75□□□□□ -0.37
Pcdha1-201ENSMUST00000070797 Tmeff1Q6PFE7 372 aa12.75□□□□□ -0.37
Pcdha1-201ENSMUST00000070797 Gm13757Q7TR17 305 aa12.75□□□□□ -0.37
Pcdha1-201ENSMUST00000070797 Olfr91Q7TRL3 312 aa12.75□□□□□ -0.37
Pcdha1-201ENSMUST00000070797 Olfr982Q8VGB3 321 aa12.75□□□□□ -0.37
Pcdha1-201ENSMUST00000070797 TMEM121BQ99MX7 572 aa12.75□□□□□ -0.37
Pcdha1-201ENSMUST00000070797 Igkv17-127A0A0G2JDN5 117 aa12.75□□□□□ -0.37
Pcdha1-201ENSMUST00000070797 Gm42517A0A1Y7VLQ2 374 aa12.75□□□□□ -0.37
Pcdha1-201ENSMUST00000070797 Gm12355A2A4X6 163 aa12.75□□□□□ -0.37
Pcdha1-201ENSMUST00000070797 Gm6890A2BG94 208 aa12.75□□□□□ -0.37
Pcdha1-201ENSMUST00000070797 Gm6812B1AXU1 112 aa12.75□□□□□ -0.37
Pcdha1-201ENSMUST00000070797 Scgb1b24B1B0N6 92 aa12.75□□□□□ -0.37
Pcdha1-201ENSMUST00000070797 1700020N15RikL7MTX3 112 aa12.75□□□□□ -0.37
Pcdha1-201ENSMUST00000070797 Slc25a17O70579 307 aa12.75□□□□□ -0.37
Pcdha1-201ENSMUST00000070797 PlauP06869 433 aa12.75□□□□□ -0.37
Pcdha1-201ENSMUST00000070797 Srsf3P84104 164 aaKnown RBP12.75□□□□□ -0.37
Pcdha1-201ENSMUST00000070797 Plrg1Q922V4 513 aaKnown RBP12.75□□□□□ -0.37
Pcdha1-201ENSMUST00000070797 1700069L16RikQ9D9H5 109 aa12.75□□□□□ -0.37
Pcdha1-201ENSMUST00000070797 Lypd2Q9DD23 127 aa12.75□□□□□ -0.37
Pcdha1-201ENSMUST00000070797 Sfrp4Q9Z1N6 351 aa12.75□□□□□ -0.37
Pcdha1-201ENSMUST00000070797 Scn9aQ62205 1984 aa12.75□□□□□ -0.37
Pcdha1-201ENSMUST00000070797 Casp6O08738 276 aa12.75□□□□□ -0.37
Pcdha1-201ENSMUST00000070797 Klk1b26P36369 261 aa12.75□□□□□ -0.37
Pcdha1-201ENSMUST00000070797 Mesp1P97309 243 aa12.75□□□□□ -0.37
Pcdha1-201ENSMUST00000070797 Olfr147Q60886 317 aa12.75□□□□□ -0.37
Pcdha1-201ENSMUST00000070797 Hist3h2bbQ8CGP0 126 aa12.75□□□□□ -0.37
Pcdha1-201ENSMUST00000070797 Olfr559Q8VH14 318 aa12.75□□□□□ -0.37
Pcdha1-201ENSMUST00000070797 Sf3b5Q923D4 86 aaKnown RBP12.75□□□□□ -0.37
Pcdha1-201ENSMUST00000070797 CenpvQ9CXS4 252 aa12.75□□□□□ -0.37
Pcdha1-201ENSMUST00000070797 Hist3h2baQ9D2U9 126 aa12.75□□□□□ -0.37
Pcdha1-201ENSMUST00000070797 Eml2Q7TNG5 649 aa12.75□□□□□ -0.37
Pcdha1-201ENSMUST00000070797 Olfr1535Q7TQU0 326 aa12.75□□□□□ -0.37
Pcdha1-201ENSMUST00000070797 Olfr1204Q7TR10 309 aa12.75□□□□□ -0.37
Pcdha1-201ENSMUST00000070797 Vmn1r233Q8R294 319 aa12.75□□□□□ -0.37
Pcdha1-201ENSMUST00000070797 Mogat1Q91ZV4 335 aa12.75□□□□□ -0.37
Pcdha1-201ENSMUST00000070797 Erv3Q9DAX3 200 aa12.75□□□□□ -0.37
Pcdha1-201ENSMUST00000070797 Gm10439A2AJU2 433 aaKnown RBP12.75□□□□□ -0.37
Pcdha1-201ENSMUST00000070797 Gm15114B1B0X6 433 aa12.75□□□□□ -0.37
Pcdha1-201ENSMUST00000070797 Vdac1Q60932 296 aaKnown RBP12.75□□□□□ -0.37
Pcdha1-201ENSMUST00000070797 Mrpl27Q99N92 148 aa12.75□□□□□ -0.37
Pcdha1-201ENSMUST00000070797 SostQ99P68 211 aa12.75□□□□□ -0.37
Pcdha1-201ENSMUST00000070797 Xlr5cQ9JJR2 179 aa12.75□□□□□ -0.37
Pcdha1-201ENSMUST00000070797 CntrlA2AL36 2334 aa12.74□□□□□ -0.37
Pcdha1-201ENSMUST00000070797 Olfr218E9PWV2 313 aa12.74□□□□□ -0.37
Pcdha1-201ENSMUST00000070797 Olfr978E9Q985 311 aa12.74□□□□□ -0.37
Pcdha1-201ENSMUST00000070797 Cdhr4H3BJZ2 783 aa12.74□□□□□ -0.37
Pcdha1-201ENSMUST00000070797 Saa1P05366 122 aa12.74□□□□□ -0.37
Pcdha1-201ENSMUST00000070797 Apobec4Q497M3 374 aa12.74□□□□□ -0.37
Pcdha1-201ENSMUST00000070797 Gpank1Q61858 372 aa12.74□□□□□ -0.37
Pcdha1-201ENSMUST00000070797 Wipi1Q8R3E3 446 aa12.74□□□□□ -0.37
Pcdha1-201ENSMUST00000070797 Olfr1271Q8VG62 305 aa12.74□□□□□ -0.37
Pcdha1-201ENSMUST00000070797 Wrap73Q9JM98 462 aa12.74□□□□□ -0.37
Pcdha1-201ENSMUST00000070797 Smim13E9Q942 88 aa12.74□□□□□ -0.37
Pcdha1-201ENSMUST00000070797 Col8a1Q00780 744 aa12.74□□□□□ -0.37
Pcdha1-201ENSMUST00000070797 Cd226Q8K4F0 333 aa12.74□□□□□ -0.37
Pcdha1-201ENSMUST00000070797 Myoz1Q9JK37 296 aa12.74□□□□□ -0.37
Pcdha1-201ENSMUST00000070797 Igkv12-38A0A0G2JEI7 115 aa12.74□□□□□ -0.37
Pcdha1-201ENSMUST00000070797 Tmem116A0A0G2JGD3 401 aa12.74□□□□□ -0.37
Pcdha1-201ENSMUST00000070797 PpiaP17742 164 aaKnown RBP12.74□□□□□ -0.37
Pcdha1-201ENSMUST00000070797 Slc35b1P97858 322 aa12.74□□□□□ -0.37
Pcdha1-201ENSMUST00000070797 MpgQ04841 333 aaKnown RBP12.74□□□□□ -0.37
Pcdha1-201ENSMUST00000070797 NmsQ5H8A1 153 aa12.74□□□□□ -0.37
Pcdha1-201ENSMUST00000070797 Olfr16Q62007 309 aa12.74□□□□□ -0.37
Pcdha1-201ENSMUST00000070797 Tra2aQ6PFR5 281 aaKnown RBP12.74□□□□□ -0.37
Pcdha1-201ENSMUST00000070797 Zfp954Q7TNU5 416 aa12.74□□□□□ -0.37
Pcdha1-201ENSMUST00000070797 Lsm11Q8BUV6 361 aa12.74□□□□□ -0.37
Pcdha1-201ENSMUST00000070797 Znhit3Q9CQK1 151 aa12.74□□□□□ -0.37
Pcdha1-201ENSMUST00000070797 Vmn1r50Q9EP51 310 aa12.74□□□□□ -0.37
Pcdha1-201ENSMUST00000070797 Sdf2l1Q9ESP1 221 aa12.74□□□□□ -0.37
Pcdha1-201ENSMUST00000070797 Trav12n-2A0A075B626 113 aa12.73□□□□□ -0.37
Pcdha1-201ENSMUST00000070797 Gm20773A0A0A6YXW2 232 aa12.73□□□□□ -0.37
Pcdha1-201ENSMUST00000070797 Gm20807A0A0A6YXX7 232 aa12.73□□□□□ -0.37
Pcdha1-201ENSMUST00000070797 Psg18B2RSG7 476 aa12.73□□□□□ -0.37
Pcdha1-201ENSMUST00000070797 Gm20873J3QMQ9 232 aa12.73□□□□□ -0.37
Pcdha1-201ENSMUST00000070797 Gm20795J3QP49 232 aa12.73□□□□□ -0.37
Pcdha1-201ENSMUST00000070797 Gm21440Q3TTD8 232 aa12.73□□□□□ -0.37
Pcdha1-201ENSMUST00000070797 Xaf1Q5NBU8 273 aa12.73□□□□□ -0.37
Pcdha1-201ENSMUST00000070797 SnrpcQ62241 159 aa12.73□□□□□ -0.37
Pcdha1-201ENSMUST00000070797 Fam234aQ8C0Z1 555 aa12.73□□□□□ -0.37
Pcdha1-201ENSMUST00000070797 Gm39566A0A1B0GT45 1251 aa12.73□□□□□ -0.37
Pcdha1-201ENSMUST00000070797 Foxa3P35584 353 aa12.73□□□□□ -0.37
Pcdha1-201ENSMUST00000070797 Il11P47873 199 aa12.73□□□□□ -0.37
Pcdha1-201ENSMUST00000070797 Pip5k1aP70182 546 aa12.73□□□□□ -0.37
Retrieved 100 of 22,080 RNA–protein pairs in 33 ms