RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 Sgms2Q9D4B1 365 aa8.87□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 RetnlaQ9EP95 111 aa8.87□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Pxmp4Q9JJW0 212 aa8.87□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 D430019H16RikJ3QPM6 83 aa8.87□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Spcs3Q6ZWQ7 180 aa8.87□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Prss3Q792Z0 246 aaKnown RBP8.87□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Fam78bQ8BQN5 261 aa8.87□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Rab29Q91YQ1 204 aa8.87□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Tppp3Q9CRB6 176 aaKnown RBP8.87□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Olfr1118A0A0J9YUE7 307 aa8.87□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Olfr284A0A0U1RP76 321 aa8.87□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Zfp971A2BFG8 470 aa8.87□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Sertad4A7DTG3 377 aa8.87□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Gm42957D6RFQ2 366 aa8.87□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Zfp970Q08BU3 522 aa8.87□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Defb8Q91V82 60 aa8.87□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Malsu1Q9CWV0 228 aa8.87□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Zfand6Q9DCH6 223 aa8.87□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 PyyQ9EPS2 98 aa8.87□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 P2ry6Q9ERK9 328 aa8.87□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Scgb1b15A0A087WP50 93 aa8.86□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Gm42517A0A1Y7VLQ2 374 aa8.86□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Gm5108J3QP01 101 aa8.86□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 CortP56469 109 aa8.86□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Wfdc18P62810 74 aa8.86□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Pax5Q02650 391 aa8.86□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 MidnQ3TPJ7 465 aa8.86□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Ms4a13Q5FWC3 203 aa8.86□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Klf11Q8K1S5 502 aa8.86□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Tlcd2Q8VC26 310 aa8.86□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Sco2Q8VCL2 255 aa8.86□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Olfr303Q8VFP0 319 aa8.86□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 HpxQ91X72 460 aa8.86□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Ythdf2Q91YT7 579 aaKnown RBP8.86□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Neurl1Q923S6 574 aa8.86□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Ms4a6cQ99N08 217 aa8.86□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Eaf1Q9D4C5 268 aa8.86□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Vmn1r47Q9EQ51 310 aa8.86□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Zfp111Q9R164 701 aa8.86□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Chd3B1AR17 2055 aa8.86□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Ifna4P07351 186 aa8.86□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Meox1P32442 253 aa8.86□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Rnd3P61588 244 aa8.86□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Ppp1ccP63087 323 aa8.86□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Sp9Q64HY3 484 aa8.86□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Utf1Q6J1H4 339 aa8.86□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Gm10309Q8C648 119 aa8.86□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Coa3Q9D2R6 108 aa8.86□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Casp8ap2Q9WUF3 1962 aa8.86□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Dock6Q8VDR9 2080 aa8.86□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Zfp433A0A0J9YUD4 600 aa8.86□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Gm32687A0A1W2P6H7 600 aa8.86□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 A930017K11RikE0CXQ2 571 aa8.86□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Olfr609E9Q4X7 319 aa8.86□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Ube2l3P68037 154 aaKnown RBP8.86□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Mrpl18Q9CQL5 180 aa8.86□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Urm1Q9D2P4 101 aa8.86□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Ctnnbip1Q9JJN6 81 aa8.86□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Aifm1Q9Z0X1 612 aa8.86□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 2410004P03RikA0A087WQY2 205 aa8.86□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Igkv9-123A0A140T8N8 117 aa8.86□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Rnf217D3YYI7 515 aa8.86□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Olfr1154L7MU57 310 aa8.86□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Olfr92L7N475 312 aa8.86□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Mien1Q9CQ86 115 aa8.86□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Fndc10A2A9Q0 223 aa8.85□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Lbhd2G3UW55 114 aa8.85□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Gnb2P62880 340 aa8.85□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Hhipl1Q14DK5 791 aa8.85□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Tctn2Q2MV57 700 aa8.85□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Tff3Q62395 81 aa8.85□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Olfr1465Q7TQR2 307 aa8.85□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Ubald2Q8BQH4 164 aa8.85□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 SprnQ8BWU1 147 aa8.85□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Pla2g3Q8BZT7 504 aa8.85□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Ndfip1Q8R0W6 221 aa8.85□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Loxl4Q924C6 757 aa8.85□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Dcbld1Q9D4J3 503 aa8.85□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Pcdh15Q99PJ1 1943 aa8.85□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Tmem116A0A0G2JGD3 401 aa8.85□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Sult2a5K7N6K9 285 aa8.85□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 PilraQ2YFS3 302 aa8.85□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Mbd3l2Q3UXB0 228 aa8.85□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Xaf1Q5NBU8 273 aa8.85□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Taar4Q5QD15 347 aa8.85□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Ppp1r3cQ7TMB3 317 aa8.85□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Slc25a28Q8R0Z5 364 aa8.85□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Rer1Q9CQU3 196 aaKnown RBP8.85□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Eif3gQ9Z1D1 320 aaKnown RBP8.85□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 1700025B11RikA0A087WNZ6 93 aa8.85□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Syngr2O55101 224 aa8.85□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Thsd4Q3UTY6 1018 aa8.85□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Lamtor1Q9CQ22 161 aa8.85□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Golt1bQ9CR60 138 aa8.85□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Gbf1Q6DFZ1 1861 aa8.85□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Gm4787B2RUD9 748 aa8.85□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Cd209gD3Z5D4 194 aa8.85□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Gm20878L7N244 103 aa8.85□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Pnliprp2P17892 482 aa8.85□□□□□ -0.99
Ccdc40-201ENSMUST00000035935 Klf17Q8CFA7 341 aa8.85□□□□□ -0.99
Retrieved 100 of 22,080 RNA–protein pairs in 118 ms