RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Hist1h2bpQ8CGP2 126 aaKnown RBP13.8□□□□□ -0.2
Trim28-201ENSMUST00000005705 Nup35Q8R4R6 325 aa13.8□□□□□ -0.2
Trim28-201ENSMUST00000005705 Osr2Q91ZD1 312 aa13.8□□□□□ -0.2
Trim28-201ENSMUST00000005705 Ankrd65F6YK91 380 aa13.8□□□□□ -0.2
Trim28-201ENSMUST00000005705 Ear14F6YUX7 155 aa13.8□□□□□ -0.2
Trim28-201ENSMUST00000005705 Rnase2O35291 155 aa13.8□□□□□ -0.2
Trim28-201ENSMUST00000005705 Mtatp6P00848 226 aa13.8□□□□□ -0.2
Trim28-201ENSMUST00000005705 Csn1s2bP02664 143 aa13.8□□□□□ -0.2
Trim28-201ENSMUST00000005705 PpiaP17742 164 aaKnown RBP13.8□□□□□ -0.2
Trim28-201ENSMUST00000005705 PpicP30412 212 aaKnown RBP13.8□□□□□ -0.2
Trim28-201ENSMUST00000005705 Foxa2P35583 459 aa13.8□□□□□ -0.2
Trim28-201ENSMUST00000005705 Fbxo7Q3U7U3 523 aa13.8□□□□□ -0.2
Trim28-201ENSMUST00000005705 Dll1Q61483 722 aa13.8□□□□□ -0.2
Trim28-201ENSMUST00000005705 Olfr1386Q7TQT0 309 aa13.8□□□□□ -0.2
Trim28-201ENSMUST00000005705 Olfr138Q7TRI7 312 aa13.8□□□□□ -0.2
Trim28-201ENSMUST00000005705 CdiptQ8VDP6 213 aa13.8□□□□□ -0.2
Trim28-201ENSMUST00000005705 Rgs11Q9Z2H1 443 aa13.8□□□□□ -0.2
Trim28-201ENSMUST00000005705 Eml6Q5SQM0 1958 aa13.8□□□□□ -0.2
Trim28-201ENSMUST00000005705 Vmn1r160E9Q346 307 aa13.79□□□□□ -0.2
Trim28-201ENSMUST00000005705 Vmn1r123L7N270 307 aa13.79□□□□□ -0.2
Trim28-201ENSMUST00000005705 Plscr4P58196 326 aa13.79□□□□□ -0.2
Trim28-201ENSMUST00000005705 Nhlh2Q64221 135 aa13.79□□□□□ -0.2
Trim28-201ENSMUST00000005705 ErasQ7TN89 227 aa13.79□□□□□ -0.2
Trim28-201ENSMUST00000005705 H2-M10.3Q85ZW6 330 aa13.79□□□□□ -0.2
Trim28-201ENSMUST00000005705 BC049762Q8C601 163 aa13.79□□□□□ -0.2
Trim28-201ENSMUST00000005705 Olfr960Q8VET5 316 aa13.79□□□□□ -0.2
Trim28-201ENSMUST00000005705 Thyn1Q91YJ3 226 aa13.79□□□□□ -0.2
Trim28-201ENSMUST00000005705 Slurp1Q9Z0K7 110 aa13.79□□□□□ -0.2
Trim28-201ENSMUST00000005705 P18528 98 aa13.79□□□□□ -0.2
Trim28-201ENSMUST00000005705 Prss54Q7M756 383 aa13.79□□□□□ -0.2
Trim28-201ENSMUST00000005705 Nkx6-1Q99MA9 365 aa13.79□□□□□ -0.2
Trim28-201ENSMUST00000005705 Mrpl49Q9CQ40 166 aa13.79□□□□□ -0.2
Trim28-201ENSMUST00000005705 Rps21Q9CQR2 83 aaKnown RBP13.79□□□□□ -0.2
Trim28-201ENSMUST00000005705 Gm4175D3YTW8 314 aa13.79□□□□□ -0.2
Trim28-201ENSMUST00000005705 Vmn1r114L7N226 321 aa13.79□□□□□ -0.2
Trim28-201ENSMUST00000005705 Vmn1r126L7N2C8 321 aa13.79□□□□□ -0.2
Trim28-201ENSMUST00000005705 Cd74P04441 279 aa13.79□□□□□ -0.2
Trim28-201ENSMUST00000005705 Defb28Q3V2L0 89 aa13.79□□□□□ -0.2
Trim28-201ENSMUST00000005705 Tmem256Q5F285 113 aa13.79□□□□□ -0.2
Trim28-201ENSMUST00000005705 Olfr1299Q7TQX5 312 aa13.79□□□□□ -0.2
Trim28-201ENSMUST00000005705 Dirc2Q8BFQ6 478 aa13.79□□□□□ -0.2
Trim28-201ENSMUST00000005705 Olfr979Q8VH10 311 aa13.79□□□□□ -0.2
Trim28-201ENSMUST00000005705 Tmprss11dQ8VHK8 417 aa13.79□□□□□ -0.2
Trim28-201ENSMUST00000005705 Eaf1Q9D4C5 268 aa13.79□□□□□ -0.2
Trim28-201ENSMUST00000005705 Ifna7P06799 190 aa13.78□□□□□ -0.2
Trim28-201ENSMUST00000005705 Cd82P40237 266 aa13.78□□□□□ -0.2
Trim28-201ENSMUST00000005705 Gm11110Q3U4K9 109 aa13.78□□□□□ -0.2
Trim28-201ENSMUST00000005705 SowahbQ8BZW2 760 aa13.78□□□□□ -0.2
Trim28-201ENSMUST00000005705 Q8CDS7 251 aa13.78□□□□□ -0.2
Trim28-201ENSMUST00000005705 Smim8Q9CQQ0 97 aa13.78□□□□□ -0.2
Trim28-201ENSMUST00000005705 Gm9817Q9D2M0 144 aa13.78□□□□□ -0.2
Trim28-201ENSMUST00000005705 Sun5Q9DA32 373 aa13.78□□□□□ -0.2
Trim28-201ENSMUST00000005705 Olfr945Q9EQB5 319 aa13.78□□□□□ -0.2
Trim28-201ENSMUST00000005705 NgfrQ9Z0W1 417 aa13.78□□□□□ -0.2
Trim28-201ENSMUST00000005705 Pax1P09084 446 aa13.78□□□□□ -0.2
Trim28-201ENSMUST00000005705 Tpsb2P21845 276 aa13.78□□□□□ -0.2
Trim28-201ENSMUST00000005705 Mbd6Q3TY92 1003 aa13.78□□□□□ -0.2
Trim28-201ENSMUST00000005705 Bex6Q3TZW7 114 aa13.78□□□□□ -0.2
Trim28-201ENSMUST00000005705 Cnep1r1Q3UJ81 125 aa13.78□□□□□ -0.2
Trim28-201ENSMUST00000005705 Gm12253Q5NC48 229 aa13.78□□□□□ -0.2
Trim28-201ENSMUST00000005705 Gtf3aQ8VHT7 364 aa13.78□□□□□ -0.2
Trim28-201ENSMUST00000005705 Mrpl30Q9D7N6 160 aa13.78□□□□□ -0.2
Trim28-201ENSMUST00000005705 Fkbp2P45878 140 aaKnown RBP13.77□□□□□ -0.2
Trim28-201ENSMUST00000005705 Lhx4P53776 390 aa13.77□□□□□ -0.2
Trim28-201ENSMUST00000005705 Zcwpw2Q08EN7 125 aa13.77□□□□□ -0.2
Trim28-201ENSMUST00000005705 Tgfbr1Q64729 503 aa13.77□□□□□ -0.2
Trim28-201ENSMUST00000005705 Oxgr1Q6IYF8 337 aa13.77□□□□□ -0.2
Trim28-201ENSMUST00000005705 Zfp455Q7M6X9 461 aa13.77□□□□□ -0.2
Trim28-201ENSMUST00000005705 Zdhhc25Q810M4 279 aa13.77□□□□□ -0.2
Trim28-201ENSMUST00000005705 NracQ8BNX7 165 aa13.77□□□□□ -0.2
Trim28-201ENSMUST00000005705 Olfr206Q8VGP9 306 aa13.77□□□□□ -0.2
Trim28-201ENSMUST00000005705 Lurap1Q9D6I9 239 aa13.77□□□□□ -0.2
Trim28-201ENSMUST00000005705 Kcnip3Q9QXT8 256 aa13.77□□□□□ -0.2
Trim28-201ENSMUST00000005705 Gm13083A2AGW5 501 aa13.77□□□□□ -0.21
Trim28-201ENSMUST00000005705 Gm21616B6ZB74 166 aa13.77□□□□□ -0.21
Trim28-201ENSMUST00000005705 4931429L15RikE9PVU2 379 aa13.77□□□□□ -0.21
Trim28-201ENSMUST00000005705 Gm9972E9Q053 102 aa13.77□□□□□ -0.21
Trim28-201ENSMUST00000005705 Gm14408E9Q6B9 136 aa13.77□□□□□ -0.21
Trim28-201ENSMUST00000005705 Olfr224M9MMJ7 314 aa13.77□□□□□ -0.21
Trim28-201ENSMUST00000005705 Phlda2O08969 144 aa13.77□□□□□ -0.21
Trim28-201ENSMUST00000005705 Trank1Q8BV79 2999 aa13.77□□□□□ -0.21
Trim28-201ENSMUST00000005705 RydenQ8CAK3 290 aaKnown RBP13.77□□□□□ -0.21
Trim28-201ENSMUST00000005705 Rnf170Q8CBG9 286 aa13.77□□□□□ -0.21
Trim28-201ENSMUST00000005705 Utp23Q9CX11 249 aaKnown RBP13.77□□□□□ -0.21
Trim28-201ENSMUST00000005705 PigcQ9CXR4 297 aa13.77□□□□□ -0.21
Trim28-201ENSMUST00000005705 Bcl2l2P70345 193 aa13.77□□□□□ -0.21
Trim28-201ENSMUST00000005705 Zfp459Q8BZ17 267 aa13.77□□□□□ -0.21
Trim28-201ENSMUST00000005705 Zc3h3Q8CHP0 950 aa13.77□□□□□ -0.21
Trim28-201ENSMUST00000005705 RfxapQ8VCG9 231 aa13.77□□□□□ -0.21
Trim28-201ENSMUST00000005705 Lmo1Q924W9 156 aa13.77□□□□□ -0.21
Trim28-201ENSMUST00000005705 Dctn5Q9QZB9 182 aa13.77□□□□□ -0.21
Trim28-201ENSMUST00000005705 Scgb1b12A0A087WP21 93 aa13.76□□□□□ -0.21
Trim28-201ENSMUST00000005705 Olfr250E9PV37 331 aa13.76□□□□□ -0.21
Trim28-201ENSMUST00000005705 Asgr2P24721 301 aa13.76□□□□□ -0.21
Trim28-201ENSMUST00000005705 CebpgP53568 150 aa13.76□□□□□ -0.21
Trim28-201ENSMUST00000005705 Cks2P56390 79 aa13.76□□□□□ -0.21
Trim28-201ENSMUST00000005705 Znf664Q4VA44 261 aa13.76□□□□□ -0.21
Trim28-201ENSMUST00000005705 ParlQ5XJY4 377 aa13.76□□□□□ -0.21
Trim28-201ENSMUST00000005705 Il31Q6EAL8 163 aa13.76□□□□□ -0.21
Trim28-201ENSMUST00000005705 Mindy2Q6PDI6 601 aa13.76□□□□□ -0.21
Retrieved 100 of 22,080 RNA–protein pairs in 51.9 ms