RNA–Protein interactions for RNA: ENST00000622179.4

SIRPA-204, Transcript of signal regulatory protein alpha, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SIRPA, Length 4,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-204ENST00000622179 GOLT1AQ6ZVE7 132 aa10.89□□□□□ -0.67
SIRPA-204ENST00000622179 C11orf53Q8IXP5 236 aa10.89□□□□□ -0.67
SIRPA-204ENST00000622179 C5orf17Q8NAS9 161 aa10.89□□□□□ -0.67
SIRPA-204ENST00000622179 ARHGAP21Q5T5U3 1957 aa10.89□□□□□ -0.67
SIRPA-204ENST00000622179 DIRC3C9JPN6 131 aa10.89□□□□□ -0.67
SIRPA-204ENST00000622179 IGKV1D-33P01593 117 aa10.89□□□□□ -0.67
SIRPA-204ENST00000622179 IGKV1-33P01594 117 aa10.89□□□□□ -0.67
SIRPA-204ENST00000622179 MT-ND6P03923 174 aa10.89□□□□□ -0.67
SIRPA-204ENST00000622179 IL4P05112 153 aa10.89□□□□□ -0.67
SIRPA-204ENST00000622179 GBGT1Q8N5D6 347 aa10.89□□□□□ -0.67
SIRPA-204ENST00000622179 DPM3Q9P2X0 92 aa10.89□□□□□ -0.67
SIRPA-204ENST00000622179 NAGKQ9UJ70 344 aa10.89□□□□□ -0.67
SIRPA-204ENST00000622179 IGHV3-23P01764 117 aa10.88□□□□□ -0.67
SIRPA-204ENST00000622179 IL36BQ9NZH7 164 aa10.88□□□□□ -0.67
SIRPA-204ENST00000622179 FOXA2Q9Y261 457 aaPredicted RBP10.88□□□□□ -0.67
SIRPA-204ENST00000622179 LY6HO94772 140 aa10.88□□□□□ -0.67
SIRPA-204ENST00000622179 IGLV1-44P01699 117 aa10.88□□□□□ -0.67
SIRPA-204ENST00000622179 S100A4P26447 101 aaKnown RBP10.88□□□□□ -0.67
SIRPA-204ENST00000622179 IGHV3OR16-10A0A075B7F0 116 aa10.88□□□□□ -0.67
SIRPA-204ENST00000622179 GCGP01275 180 aa10.88□□□□□ -0.67
SIRPA-204ENST00000622179 DDTP30046 118 aa10.88□□□□□ -0.67
SIRPA-204ENST00000622179 DMRT1Q9Y5R6 373 aa10.88□□□□□ -0.67
SIRPA-204ENST00000622179 HLA-DQA1P01909 254 aa10.87□□□□□ -0.67
SIRPA-204ENST00000622179 CDKN1AP38936 164 aa10.87□□□□□ -0.67
SIRPA-204ENST00000622179 Q6ZPA2 131 aa10.87□□□□□ -0.67
SIRPA-204ENST00000622179 PAFAH1B2P68402 229 aa10.87□□□□□ -0.67
SIRPA-204ENST00000622179 VKORC1Q9BQB6 163 aa10.87□□□□□ -0.67
SIRPA-204ENST00000622179 AGMATQ9BSE5 352 aa10.87□□□□□ -0.67
SIRPA-204ENST00000622179 TRBV24-1A0A075B6N3 115 aa10.87□□□□□ -0.67
SIRPA-204ENST00000622179 GPX4P36969 197 aaPredicted RBP10.87□□□□□ -0.67
SIRPA-204ENST00000622179 GNG5P63218 68 aa10.87□□□□□ -0.67
SIRPA-204ENST00000622179 UNQ5815/PRO19632Q6UWF5 114 aa10.87□□□□□ -0.67
SIRPA-204ENST00000622179 LINC01551Q86U37 167 aa10.87□□□□□ -0.67
SIRPA-204ENST00000622179 FAM169BQ8N8A8 192 aa10.87□□□□□ -0.67
SIRPA-204ENST00000622179 EML5Q05BV3 1969 aa10.87□□□□□ -0.67
SIRPA-204ENST00000622179 FAM208BQ5VWN6 2430 aa10.87□□□□□ -0.67
SIRPA-204ENST00000622179 IGHV3OR16-13A0A075B7E8 117 aa10.87□□□□□ -0.67
SIRPA-204ENST00000622179 IGHV3-74A0A0B4J1X5 117 aa10.87□□□□□ -0.67
SIRPA-204ENST00000622179 SOD3P08294 240 aa10.87□□□□□ -0.67
SIRPA-204ENST00000622179 SPRNQ5BIV9 151 aa10.87□□□□□ -0.67
SIRPA-204ENST00000622179 Q6ZN92 141 aa10.87□□□□□ -0.67
SIRPA-204ENST00000622179 RNASEH2CQ8TDP1 164 aaKnown RBP10.87□□□□□ -0.67
SIRPA-204ENST00000622179 BET1LQ9NYM9 111 aa10.87□□□□□ -0.67
SIRPA-204ENST00000622179 TLN1Q9Y490 2541 aaKnown RBP10.87□□□□□ -0.67
SIRPA-204ENST00000622179 C15orf65H3BRN8 121 aa10.86□□□□□ -0.67
SIRPA-204ENST00000622179 MMP23AO75900 390 aa10.86□□□□□ -0.67
SIRPA-204ENST00000622179 GOSR1O95249 250 aa10.86□□□□□ -0.67
SIRPA-204ENST00000622179 FAM106CPP0CH98 169 aa10.86□□□□□ -0.67
SIRPA-204ENST00000622179 DLX1P56177 255 aa10.86□□□□□ -0.67
SIRPA-204ENST00000622179 PPP1R27Q86WC6 154 aa10.86□□□□□ -0.67
SIRPA-204ENST00000622179 TMEM242Q9NWH2 141 aa10.86□□□□□ -0.67
SIRPA-204ENST00000622179 CGB1A6NKQ9 187 aa10.86□□□□□ -0.67
SIRPA-204ENST00000622179 M0R143 59 aa10.86□□□□□ -0.67
SIRPA-204ENST00000622179 PEX7O00628 323 aa10.86□□□□□ -0.67
SIRPA-204ENST00000622179 WNT10AQ9GZT5 417 aa10.86□□□□□ -0.67
SIRPA-204ENST00000622179 CACNA1AO00555 2505 aa10.86□□□□□ -0.67
SIRPA-204ENST00000622179 MFAP4P55083 255 aa10.86□□□□□ -0.67
SIRPA-204ENST00000622179 CEP295Q9C0D2 2601 aa10.86□□□□□ -0.67
SIRPA-204ENST00000622179 CA1P00915 261 aaPredicted RBP10.85□□□□□ -0.67
SIRPA-204ENST00000622179 AMY1AP04745 511 aa10.85□□□□□ -0.67
SIRPA-204ENST00000622179 RIGQ13278 110 aa10.85□□□□□ -0.67
SIRPA-204ENST00000622179 TEX38Q6PEX7 206 aa10.85□□□□□ -0.67
SIRPA-204ENST00000622179 SLC25A48Q6ZT89 311 aaKnown RBP10.85□□□□□ -0.67
SIRPA-204ENST00000622179 SRSF12Q8WXF0 261 aaKnown RBP10.85□□□□□ -0.67
SIRPA-204ENST00000622179 DKK4Q9UBT3 224 aa10.85□□□□□ -0.67
SIRPA-204ENST00000622179 IGF2RP11717 2491 aa10.85□□□□□ -0.67
SIRPA-204ENST00000622179 FOXA3P55318 350 aaPredicted RBP10.85□□□□□ -0.67
SIRPA-204ENST00000622179 ZNF257Q9Y2Q1 563 aa10.85□□□□□ -0.67
SIRPA-204ENST00000622179 IGHV1-8P0DP01 117 aa10.85□□□□□ -0.67
SIRPA-204ENST00000622179 KIR3DL3Q8N743 410 aa10.85□□□□□ -0.67
SIRPA-204ENST00000622179 OR2J3O76001 311 aa10.85□□□□□ -0.67
SIRPA-204ENST00000622179 WNT2P09544 360 aa10.85□□□□□ -0.67
SIRPA-204ENST00000622179 ZCCHC14Q8WYQ9 949 aaKnown RBP10.85□□□□□ -0.67
SIRPA-204ENST00000622179 OR5AL1P0C617 328 aa10.84□□□□□ -0.67
SIRPA-204ENST00000622179 COMPP49747 757 aaPredicted RBP10.84□□□□□ -0.67
SIRPA-204ENST00000622179 C17orf58Q2M2W7 97 aa10.84□□□□□ -0.67
SIRPA-204ENST00000622179 NUP37Q8NFH4 326 aa10.84□□□□□ -0.67
SIRPA-204ENST00000622179 YTHDF2Q9Y5A9 579 aaKnown RBP10.84□□□□□ -0.67
SIRPA-204ENST00000622179 TNCP24821 2201 aa10.84□□□□□ -0.67
SIRPA-204ENST00000622179 ARFGEF3Q5TH69 2177 aa10.84□□□□□ -0.67
SIRPA-204ENST00000622179 H0YJW9 148 aa10.84□□□□□ -0.67
SIRPA-204ENST00000622179 LY6DQ14210 128 aa10.84□□□□□ -0.67
SIRPA-204ENST00000622179 ZNF672Q499Z4 452 aaPredicted RBP10.84□□□□□ -0.67
SIRPA-204ENST00000622179 IGFL3Q6UXB1 125 aa10.84□□□□□ -0.67
SIRPA-204ENST00000622179 TMEM170AQ8WVE7 144 aa10.84□□□□□ -0.67
SIRPA-204ENST00000622179 NEU1Q99519 415 aa10.84□□□□□ -0.67
SIRPA-204ENST00000622179 LOC389332A0A1B0GUA5 103 aa10.84□□□□□ -0.67
SIRPA-204ENST00000622179 NHLH1Q02575 133 aa10.84□□□□□ -0.67
SIRPA-204ENST00000622179 HIST3H2BBQ8N257 126 aa10.84□□□□□ -0.67
SIRPA-204ENST00000622179 LYPD6BQ8NI32 183 aa10.84□□□□□ -0.67
SIRPA-204ENST00000622179 HIST1H2BLQ99880 126 aa10.84□□□□□ -0.67
SIRPA-204ENST00000622179 TRANK1O15050 2925 aa10.84□□□□□ -0.67
SIRPA-204ENST00000622179 TIMM23O14925 209 aa10.84□□□□□ -0.67
SIRPA-204ENST00000622179 ACACBO00763 2458 aa10.84□□□□□ -0.67
SIRPA-204ENST00000622179 TCRBV4S1A1TA0A5B7 111 aa10.83□□□□□ -0.68
SIRPA-204ENST00000622179 ADMP35318 185 aa10.83□□□□□ -0.68
SIRPA-204ENST00000622179 C2orf83Q53S99 150 aa10.83□□□□□ -0.68
SIRPA-204ENST00000622179 ATOH7Q8N100 152 aa10.83□□□□□ -0.68
SIRPA-204ENST00000622179 GSX1Q9H4S2 264 aaPredicted RBP10.83□□□□□ -0.68
SIRPA-204ENST00000622179 CBLN4Q9NTU7 201 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms