RNA–Protein interactions for RNA: ENST00000616579.4

TMPRSS4-219, Transcript of transmembrane serine protease 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TMPRSS4, Length 3,417 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMPRSS4-219ENST00000616579 TMEM208Q9BTX3 173 aa7.08□□□□□ -1.28
TMPRSS4-219ENST00000616579 GAL3ST2Q9H3Q3 398 aa7.08□□□□□ -1.28
TMPRSS4-219ENST00000616579 FOXA2Q9Y261 457 aaPredicted RBP7.08□□□□□ -1.28
TMPRSS4-219ENST00000616579 K7EM74 188 aa7.08□□□□□ -1.28
TMPRSS4-219ENST00000616579 IGHV1-46P01743 117 aa7.08□□□□□ -1.28
TMPRSS4-219ENST00000616579 COL8A2P25067 703 aa7.08□□□□□ -1.28
TMPRSS4-219ENST00000616579 BMI1P35226 326 aa7.08□□□□□ -1.28
TMPRSS4-219ENST00000616579 HLA-DRB5Q30154 266 aa7.08□□□□□ -1.28
TMPRSS4-219ENST00000616579 COA6Q5JTJ3 125 aaKnown RBP7.08□□□□□ -1.28
TMPRSS4-219ENST00000616579 DNLZQ5SXM8 178 aa7.08□□□□□ -1.28
TMPRSS4-219ENST00000616579 TMEM144Q7Z5S9 345 aa7.08□□□□□ -1.28
TMPRSS4-219ENST00000616579 NHLRC2Q8NBF2 726 aa7.08□□□□□ -1.28
TMPRSS4-219ENST00000616579 OR10W1Q8NGF6 305 aa7.08□□□□□ -1.28
TMPRSS4-219ENST00000616579 OR9G1Q8NH87 305 aa7.08□□□□□ -1.28
TMPRSS4-219ENST00000616579 SCNM1Q9BWG6 230 aa7.08□□□□□ -1.28
TMPRSS4-219ENST00000616579 SSUH2Q9Y2M2 353 aa7.08□□□□□ -1.28
TMPRSS4-219ENST00000616579 TEP1Q99973 2627 aaKnown RBP7.08□□□□□ -1.28
TMPRSS4-219ENST00000616579 A0A1W2PRD5 423 aa7.08□□□□□ -1.28
TMPRSS4-219ENST00000616579 A0A1W2PRF3 423 aa7.08□□□□□ -1.28
TMPRSS4-219ENST00000616579 A0A1W2PRM7 423 aa7.08□□□□□ -1.28
TMPRSS4-219ENST00000616579 MBD3L4A6NDZ8 208 aaPredicted RBP7.08□□□□□ -1.28
TMPRSS4-219ENST00000616579 MBD3L3A6NE82 208 aaPredicted RBP7.08□□□□□ -1.28
TMPRSS4-219ENST00000616579 MBD3L5A6NJ08 208 aaPredicted RBP7.08□□□□□ -1.28
TMPRSS4-219ENST00000616579 UPK2O00526 184 aa7.08□□□□□ -1.28
TMPRSS4-219ENST00000616579 MMP23AO75900 390 aa7.08□□□□□ -1.28
TMPRSS4-219ENST00000616579 CRYABP02511 175 aaKnown RBP7.08□□□□□ -1.28
TMPRSS4-219ENST00000616579 CCL3L1P16619 93 aa7.08□□□□□ -1.28
TMPRSS4-219ENST00000616579 Q8N7P7 452 aa7.08□□□□□ -1.28
TMPRSS4-219ENST00000616579 OR1L8Q8NGR8 309 aa7.08□□□□□ -1.28
TMPRSS4-219ENST00000616579 MBD3L2Q8NHZ7 208 aaPredicted RBP7.08□□□□□ -1.28
TMPRSS4-219ENST00000616579 FLYWCH2Q96CP2 140 aaKnown RBP7.08□□□□□ -1.28
TMPRSS4-219ENST00000616579 NDUFAF3Q9BU61 184 aa7.08□□□□□ -1.28
TMPRSS4-219ENST00000616579 RNASE7Q9H1E1 156 aaKnown RBP7.08□□□□□ -1.28
TMPRSS4-219ENST00000616579 ZNF331Q9NQX6 463 aaPredicted RBP7.08□□□□□ -1.28
TMPRSS4-219ENST00000616579 TMEM14BQ9NUH8 114 aa7.08□□□□□ -1.28
TMPRSS4-219ENST00000616579 IGHV3-72A0A0B4J1Y9 119 aa7.07□□□□□ -1.28
TMPRSS4-219ENST00000616579 PRRG2O14669 202 aa7.07□□□□□ -1.28
TMPRSS4-219ENST00000616579 DLEU1O43261 78 aa7.07□□□□□ -1.28
TMPRSS4-219ENST00000616579 LINC00869P0C866 280 aa7.07□□□□□ -1.28
TMPRSS4-219ENST00000616579 SAA1P0DJI8 122 aaPredicted RBP7.07□□□□□ -1.28
TMPRSS4-219ENST00000616579 PMCHP20382 165 aa7.07□□□□□ -1.28
TMPRSS4-219ENST00000616579 NTF3P20783 257 aa7.07□□□□□ -1.28
TMPRSS4-219ENST00000616579 CD40P25942 277 aa7.07□□□□□ -1.28
TMPRSS4-219ENST00000616579 CFHR2P36980 270 aa7.07□□□□□ -1.28
TMPRSS4-219ENST00000616579 RANP62826 216 aaKnown RBP7.07□□□□□ -1.28
TMPRSS4-219ENST00000616579 C1orf229Q6ZS94 237 aaPredicted RBP7.07□□□□□ -1.28
TMPRSS4-219ENST00000616579 OR5AU1Q8NGC0 362 aa7.07□□□□□ -1.28
TMPRSS4-219ENST00000616579 VN1R17PQ8TDU5 208 aa7.07□□□□□ -1.28
TMPRSS4-219ENST00000616579 SFXN3Q9BWM7 321 aa7.07□□□□□ -1.28
TMPRSS4-219ENST00000616579 PAM16Q9Y3D7 125 aa7.07□□□□□ -1.28
TMPRSS4-219ENST00000616579 CHD6Q8TD26 2715 aa7.07□□□□□ -1.28
TMPRSS4-219ENST00000616579 A8MWP6 167 aa7.07□□□□□ -1.28
TMPRSS4-219ENST00000616579 SIAH2O43255 324 aa7.07□□□□□ -1.28
TMPRSS4-219ENST00000616579 PLAUP00749 431 aa7.07□□□□□ -1.28
TMPRSS4-219ENST00000616579 AMTP48728 403 aa7.07□□□□□ -1.28
TMPRSS4-219ENST00000616579 SUB1P53999 127 aaKnown RBP eCLIP7.07□□□□□ -1.28
TMPRSS4-219ENST00000616579 RPL8P62917 257 aaKnown RBP7.07□□□□□ -1.28
TMPRSS4-219ENST00000616579 PRCDQ00LT1 54 aa7.07□□□□□ -1.28
TMPRSS4-219ENST00000616579 MRPL20Q9BYC9 149 aaKnown RBP7.07□□□□□ -1.28
TMPRSS4-219ENST00000616579 SAP30LQ9HAJ7 183 aa7.07□□□□□ -1.28
TMPRSS4-219ENST00000616579 LSM4Q9Y4Z0 139 aaKnown RBP7.07□□□□□ -1.28
TMPRSS4-219ENST00000616579 NDUFB3O43676 98 aa7.07□□□□□ -1.28
TMPRSS4-219ENST00000616579 SLC25A17O43808 307 aa7.07□□□□□ -1.28
TMPRSS4-219ENST00000616579 ZNF253O75346 499 aa7.07□□□□□ -1.28
TMPRSS4-219ENST00000616579 SERF1AO75920 110 aa7.07□□□□□ -1.28
TMPRSS4-219ENST00000616579 C8orf88P0DMB2 117 aa7.07□□□□□ -1.28
TMPRSS4-219ENST00000616579 TMPRSS3P57727 454 aa7.07□□□□□ -1.28
TMPRSS4-219ENST00000616579 TMEM249Q2WGJ8 235 aa7.07□□□□□ -1.28
TMPRSS4-219ENST00000616579 IBA57Q5T440 356 aaKnown RBP7.07□□□□□ -1.28
TMPRSS4-219ENST00000616579 SEM1Q6ZVN7 128 aa7.07□□□□□ -1.28
TMPRSS4-219ENST00000616579 ZCCHC14Q8WYQ9 949 aaKnown RBP7.07□□□□□ -1.28
TMPRSS4-219ENST00000616579 ZNF586Q9NXT0 402 aa7.07□□□□□ -1.28
TMPRSS4-219ENST00000616579 RPUSD1Q9UJJ7 312 aaKnown RBP7.07□□□□□ -1.28
TMPRSS4-219ENST00000616579 FN1P02751 2386 aaKnown RBP7.06□□□□□ -1.28
TMPRSS4-219ENST00000616579 DSCAMO60469 2012 aa7.06□□□□□ -1.28
TMPRSS4-219ENST00000616579 TEX50A0A1B0GTY4 177 aa7.06□□□□□ -1.28
TMPRSS4-219ENST00000616579 M0R143 59 aa7.06□□□□□ -1.28
TMPRSS4-219ENST00000616579 CT45A6P0DMU7 189 aa7.06□□□□□ -1.28
TMPRSS4-219ENST00000616579 CT45A5P0DMU8 189 aa7.06□□□□□ -1.28
TMPRSS4-219ENST00000616579 CT45A7P0DMV0 189 aa7.06□□□□□ -1.28
TMPRSS4-219ENST00000616579 RPL15P61313 204 aaKnown RBP7.06□□□□□ -1.28
TMPRSS4-219ENST00000616579 PRR31Q5SQ13 230 aa7.06□□□□□ -1.28
TMPRSS4-219ENST00000616579 OR5B3Q8NH48 314 aa7.06□□□□□ -1.28
TMPRSS4-219ENST00000616579 OR2T6Q8NHC8 308 aa7.06□□□□□ -1.28
TMPRSS4-219ENST00000616579 DDB2Q92466 427 aa7.06□□□□□ -1.28
TMPRSS4-219ENST00000616579 ZNF714Q96N38 554 aa7.06□□□□□ -1.28
TMPRSS4-219ENST00000616579 GAFA1Q96PS6 74 aa7.06□□□□□ -1.28
TMPRSS4-219ENST00000616579 SNHG12Q9BXW3 62 aa7.06□□□□□ -1.28
TMPRSS4-219ENST00000616579 TANC2Q9HCD6 1990 aa7.06□□□□□ -1.28
TMPRSS4-219ENST00000616579 DCHS2Q6V1P9 2916 aa7.06□□□□□ -1.28
TMPRSS4-219ENST00000616579 SRRM4A7MD48 611 aaKnown RBP7.06□□□□□ -1.28
TMPRSS4-219ENST00000616579 PF4V1P10720 104 aa7.06□□□□□ -1.28
TMPRSS4-219ENST00000616579 ORM2P19652 201 aa7.06□□□□□ -1.28
TMPRSS4-219ENST00000616579 PLGLAQ15195 96 aa7.06□□□□□ -1.28
TMPRSS4-219ENST00000616579 LRRC10Q5BKY1 277 aa7.06□□□□□ -1.28
TMPRSS4-219ENST00000616579 FAM169BQ8N8A8 192 aa7.06□□□□□ -1.28
TMPRSS4-219ENST00000616579 BLNKQ8WV28 456 aa7.06□□□□□ -1.28
TMPRSS4-219ENST00000616579 NPIPB3Q92617 1050 aa7.06□□□□□ -1.28
TMPRSS4-219ENST00000616579 VAMP8Q9BV40 100 aa7.06□□□□□ -1.28
TMPRSS4-219ENST00000616579 C16orf97H3BN30 126 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms