RNA–Protein interactions for RNA: ENST00000611950.1

PCDHGC3-202, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGC3, Length 2,849 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-202ENST00000611950 HBZP02008 142 aa8.84□□□□□ -0.99
PCDHGC3-202ENST00000611950 FAM3BP58499 235 aaPredicted RBP8.84□□□□□ -0.99
PCDHGC3-202ENST00000611950 MEF2BQ02080 365 aaPredicted RBP8.84□□□□□ -0.99
PCDHGC3-202ENST00000611950 DPPA3Q6W0C5 159 aa8.84□□□□□ -0.99
PCDHGC3-202ENST00000611950 C19orf35Q6ZS72 473 aa8.84□□□□□ -0.99
PCDHGC3-202ENST00000611950 Q6ZWC4 215 aa8.84□□□□□ -0.99
PCDHGC3-202ENST00000611950 LINC00596Q86U02 117 aa8.84□□□□□ -0.99
PCDHGC3-202ENST00000611950 OR8G5Q8NG78 346 aa8.84□□□□□ -0.99
PCDHGC3-202ENST00000611950 OR10G4Q8NGN3 311 aa8.84□□□□□ -0.99
PCDHGC3-202ENST00000611950 OR10G9Q8NGN4 311 aa8.84□□□□□ -0.99
PCDHGC3-202ENST00000611950 OR10G7Q8NGN6 311 aa8.84□□□□□ -0.99
PCDHGC3-202ENST00000611950 PARLQ9H300 379 aa8.84□□□□□ -0.99
PCDHGC3-202ENST00000611950 TMEM242Q9NWH2 141 aa8.84□□□□□ -0.99
PCDHGC3-202ENST00000611950 LINC00473A8K010 186 aa8.84□□□□□ -0.99
PCDHGC3-202ENST00000611950 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.84□□□□□ -0.99
PCDHGC3-202ENST00000611950 EDDM3BP56851 147 aa8.84□□□□□ -0.99
PCDHGC3-202ENST00000611950 ERVK11-1P61568 191 aa8.84□□□□□ -0.99
PCDHGC3-202ENST00000611950 SUMO1P63165 101 aaKnown RBP8.84□□□□□ -0.99
PCDHGC3-202ENST00000611950 TGFBR3Q03167 851 aa8.84□□□□□ -0.99
PCDHGC3-202ENST00000611950 OR5B3Q8NH48 314 aa8.84□□□□□ -0.99
PCDHGC3-202ENST00000611950 LEAP2Q969E1 77 aa8.84□□□□□ -0.99
PCDHGC3-202ENST00000611950 PATZ1Q9HBE1 687 aaKnown RBP8.84□□□□□ -0.99
PCDHGC3-202ENST00000611950 TRAV8-6A0A0B4J262 113 aa8.83□□□□□ -1
PCDHGC3-202ENST00000611950 GAGE10A6NGK3 116 aa8.83□□□□□ -1
PCDHGC3-202ENST00000611950 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.83□□□□□ -1
PCDHGC3-202ENST00000611950 CST9LP1Q5W188 147 aa8.83□□□□□ -1
PCDHGC3-202ENST00000611950 KCNIP1Q9NZI2 227 aa8.83□□□□□ -1
PCDHGC3-202ENST00000611950 RELNP78509 3460 aa8.83□□□□□ -1
PCDHGC3-202ENST00000611950 TRGV5A0A0B4J1U4 118 aa8.83□□□□□ -1
PCDHGC3-202ENST00000611950 MLNRO43193 412 aa8.83□□□□□ -1
PCDHGC3-202ENST00000611950 IGHV1-2P23083 117 aa8.83□□□□□ -1
PCDHGC3-202ENST00000611950 BRWD1-AS2P59051 145 aa8.83□□□□□ -1
PCDHGC3-202ENST00000611950 C1orf174Q8IYL3 243 aa8.83□□□□□ -1
PCDHGC3-202ENST00000611950 DEFB125Q8N687 156 aa8.83□□□□□ -1
PCDHGC3-202ENST00000611950 OR13A1Q8NGR1 328 aa8.83□□□□□ -1
PCDHGC3-202ENST00000611950 LSM10Q969L4 123 aaKnown RBP8.83□□□□□ -1
PCDHGC3-202ENST00000611950 GALR1P47211 349 aa8.82□□□□□ -1
PCDHGC3-202ENST00000611950 RPL23P62829 140 aaKnown RBP8.82□□□□□ -1
PCDHGC3-202ENST00000611950 PRR31Q5SQ13 230 aa8.82□□□□□ -1
PCDHGC3-202ENST00000611950 KLF14Q8TD94 323 aaPredicted RBP8.82□□□□□ -1
PCDHGC3-202ENST00000611950 IGHV3OR15-7A0A075B7D8 119 aa8.82□□□□□ -1
PCDHGC3-202ENST00000611950 ZNF207O43670 478 aaKnown RBP8.82□□□□□ -1
PCDHGC3-202ENST00000611950 ATP5G3P48201 142 aa8.82□□□□□ -1
PCDHGC3-202ENST00000611950 HIST1H1AQ02539 215 aaPredicted RBP8.82□□□□□ -1
PCDHGC3-202ENST00000611950 UTF1Q5T230 341 aa8.82□□□□□ -1
PCDHGC3-202ENST00000611950 H2BFWTQ7Z2G1 175 aa8.82□□□□□ -1
PCDHGC3-202ENST00000611950 OR10P1Q8NGE3 313 aa8.82□□□□□ -1
PCDHGC3-202ENST00000611950 COQ2Q96H96 371 aa8.82□□□□□ -1
PCDHGC3-202ENST00000611950 POLDIP2Q9Y2S7 368 aa8.82□□□□□ -1
PCDHGC3-202ENST00000611950 NPIPB5A8MRT5 1133 aa8.81□□□□□ -1
PCDHGC3-202ENST00000611950 IFNA1P01562 189 aa8.81□□□□□ -1
PCDHGC3-202ENST00000611950 PSMB3P49720 205 aa8.81□□□□□ -1
PCDHGC3-202ENST00000611950 MRPL23Q16540 153 aaKnown RBP8.81□□□□□ -1
PCDHGC3-202ENST00000611950 OR4A5Q8NH83 315 aa8.81□□□□□ -1
PCDHGC3-202ENST00000611950 MBD3L1Q8WWY6 194 aa8.81□□□□□ -1
PCDHGC3-202ENST00000611950 UHRF2Q96PU4 802 aa8.81□□□□□ -1
PCDHGC3-202ENST00000611950 TRAV1-1A0A0B4J248 108 aa8.81□□□□□ -1
PCDHGC3-202ENST00000611950 LRRC30A6NM36 301 aa8.81□□□□□ -1
PCDHGC3-202ENST00000611950 NPIPB11E5RHQ5 1161 aa8.81□□□□□ -1
PCDHGC3-202ENST00000611950 TIMM8AO60220 97 aaPredicted RBP8.81□□□□□ -1
PCDHGC3-202ENST00000611950 FCGR3BO75015 233 aa8.81□□□□□ -1
PCDHGC3-202ENST00000611950 ACOT6Q3I5F7 207 aaPredicted RBP8.81□□□□□ -1
PCDHGC3-202ENST00000611950 KLHDC1Q8N7A1 406 aa8.81□□□□□ -1
PCDHGC3-202ENST00000611950 ZNF645Q8N7E2 425 aa8.81□□□□□ -1
PCDHGC3-202ENST00000611950 OR4F17Q8NGA8 305 aa8.81□□□□□ -1
PCDHGC3-202ENST00000611950 PYGO2Q9BRQ0 406 aa8.81□□□□□ -1
PCDHGC3-202ENST00000611950 ZDHHC11Q9H8X9 412 aa8.81□□□□□ -1
PCDHGC3-202ENST00000611950 DUSP13Q9UII6 198 aa8.81□□□□□ -1
PCDHGC3-202ENST00000611950 NOTCH2Q04721 2471 aa8.81□□□□□ -1
PCDHGC3-202ENST00000611950 SPTBN1Q01082 2364 aaKnown RBP8.81□□□□□ -1
PCDHGC3-202ENST00000611950 TEX15Q9BXT5 2789 aa8.81□□□□□ -1
PCDHGC3-202ENST00000611950 TET2Q6N021 2002 aaPredicted RBP8.81□□□□□ -1
PCDHGC3-202ENST00000611950 TMEM30CPA0ZSE6 113 aa8.81□□□□□ -1
PCDHGC3-202ENST00000611950 CCL11P51671 97 aa8.81□□□□□ -1
PCDHGC3-202ENST00000611950 SERF2P84101 59 aa8.81□□□□□ -1
PCDHGC3-202ENST00000611950 FAM201AQ5SY85 155 aa8.81□□□□□ -1
PCDHGC3-202ENST00000611950 TMEM14EPQ6UXP3 125 aa8.81□□□□□ -1
PCDHGC3-202ENST00000611950 NPCDR1Q9BY65 106 aa8.81□□□□□ -1
PCDHGC3-202ENST00000611950 NPFFR1Q9GZQ6 430 aa8.81□□□□□ -1
PCDHGC3-202ENST00000611950 TMEM189A5PLL7 270 aa8.8□□□□□ -1
PCDHGC3-202ENST00000611950 PLXNB1O43157 2135 aa8.8□□□□□ -1
PCDHGC3-202ENST00000611950 NUPR1O60356 82 aa8.8□□□□□ -1
PCDHGC3-202ENST00000611950 GYPAP02724 150 aa8.8□□□□□ -1
PCDHGC3-202ENST00000611950 CD99P14209 185 aa8.8□□□□□ -1
PCDHGC3-202ENST00000611950 NPPCP23582 126 aa8.8□□□□□ -1
PCDHGC3-202ENST00000611950 PNRC1Q12796 327 aaPredicted RBP8.8□□□□□ -1
PCDHGC3-202ENST00000611950 RPL39P5Q59GN2 51 aa8.8□□□□□ -1
PCDHGC3-202ENST00000611950 SSMEM1Q8WWF3 244 aa8.8□□□□□ -1
PCDHGC3-202ENST00000611950 OR5B12Q96R08 314 aa8.8□□□□□ -1
PCDHGC3-202ENST00000611950 SERTAD4Q9NUC0 356 aa8.8□□□□□ -1
PCDHGC3-202ENST00000611950 MBNL3Q9NUK0 354 aaKnown RBP8.8□□□□□ -1
PCDHGC3-202ENST00000611950 TRAV3A0A0B4J244 114 aa8.8□□□□□ -1
PCDHGC3-202ENST00000611950 C11orf94C9JXX5 98 aa8.8□□□□□ -1
PCDHGC3-202ENST00000611950 KBTBD11O94819 623 aa8.8□□□□□ -1
PCDHGC3-202ENST00000611950 OR9G9P0C7N8 305 aa8.8□□□□□ -1
PCDHGC3-202ENST00000611950 SEC61GP60059 68 aa8.8□□□□□ -1
PCDHGC3-202ENST00000611950 TGIF2LYQ8IUE0 185 aa8.8□□□□□ -1
PCDHGC3-202ENST00000611950 TMEM256Q8N2U0 113 aa8.8□□□□□ -1
PCDHGC3-202ENST00000611950 ZNF114Q8NC26 417 aa8.8□□□□□ -1
PCDHGC3-202ENST00000611950 MCRIP2Q9BUT9 160 aaKnown RBP8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms