RNA–Protein interactions for RNA: ENST00000588667.5

ATG4D-208, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,619 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-208ENST00000588667 HAPLN4Q86UW8 402 aa15.71■□□□□ 0.11
ATG4D-208ENST00000588667 PF4V1P10720 104 aa15.7■□□□□ 0.1
ATG4D-208ENST00000588667 NPY1RP25929 384 aa15.7■□□□□ 0.1
ATG4D-208ENST00000588667 RPL27AP46776 148 aaKnown RBP15.7■□□□□ 0.1
ATG4D-208ENST00000588667 RAB14P61106 215 aa15.7■□□□□ 0.1
ATG4D-208ENST00000588667 ARL16Q0P5N6 197 aa15.7■□□□□ 0.1
ATG4D-208ENST00000588667 ASPHD1Q5U4P2 390 aa15.7■□□□□ 0.1
ATG4D-208ENST00000588667 LCNL1Q6ZST4 164 aa15.7■□□□□ 0.1
ATG4D-208ENST00000588667 OR4F17Q8NGA8 305 aa15.7■□□□□ 0.1
ATG4D-208ENST00000588667 OR4F4Q96R69 305 aa15.7■□□□□ 0.1
ATG4D-208ENST00000588667 ARV1Q9H2C2 271 aa15.7■□□□□ 0.1
ATG4D-208ENST00000588667 PMS2P5A8MQ11 134 aa15.69■□□□□ 0.1
ATG4D-208ENST00000588667 IFNA5P01569 189 aa15.69■□□□□ 0.1
ATG4D-208ENST00000588667 SNCAP37840 140 aa15.69■□□□□ 0.1
ATG4D-208ENST00000588667 MYOZ3Q8TDC0 251 aa15.69■□□□□ 0.1
ATG4D-208ENST00000588667 SLC25A24Q6NUK1 477 aa15.68■□□□□ 0.1
ATG4D-208ENST00000588667 ETV3LQ6ZN32 361 aa15.68■□□□□ 0.1
ATG4D-208ENST00000588667 OR10W1Q8NGF6 305 aa15.68■□□□□ 0.1
ATG4D-208ENST00000588667 GINS3Q9BRX5 216 aa15.68■□□□□ 0.1
ATG4D-208ENST00000588667 KLK15Q9H2R5 256 aa15.68■□□□□ 0.1
ATG4D-208ENST00000588667 E7EUB6 86 aa15.68■□□□□ 0.1
ATG4D-208ENST00000588667 H3BUA1 57 aa15.68■□□□□ 0.1
ATG4D-208ENST00000588667 IFNA4P05014 189 aa15.68■□□□□ 0.1
ATG4D-208ENST00000588667 CDX1P47902 265 aaPredicted RBP15.68■□□□□ 0.1
ATG4D-208ENST00000588667 RAB9AP51151 201 aa15.68■□□□□ 0.1
ATG4D-208ENST00000588667 TREML4Q6UXN2 200 aa15.68■□□□□ 0.1
ATG4D-208ENST00000588667 HSD17B13Q7Z5P4 300 aaPredicted RBP15.68■□□□□ 0.1
ATG4D-208ENST00000588667 TMED6Q8WW62 240 aa15.68■□□□□ 0.1
ATG4D-208ENST00000588667 CMYA5Q8N3K9 4069 aa15.67■□□□□ 0.1
ATG4D-208ENST00000588667 CGB1A6NKQ9 187 aa15.67■□□□□ 0.1
ATG4D-208ENST00000588667 BSXQ3C1V8 233 aa15.67■□□□□ 0.1
ATG4D-208ENST00000588667 C2orf83Q53S99 150 aa15.67■□□□□ 0.1
ATG4D-208ENST00000588667 HSD17B11Q8NBQ5 300 aa15.67■□□□□ 0.1
ATG4D-208ENST00000588667 KLHL30-AS1Q8NEE0 82 aa15.67■□□□□ 0.1
ATG4D-208ENST00000588667 SCGB1C1Q8TD33 95 aa15.67■□□□□ 0.1
ATG4D-208ENST00000588667 TMEM147Q9BVK8 224 aa15.67■□□□□ 0.1
ATG4D-208ENST00000588667 NUDT19A8MXV4 375 aa15.66■□□□□ 0.1
ATG4D-208ENST00000588667 TEX22C9J3V5 150 aa15.66■□□□□ 0.1
ATG4D-208ENST00000588667 APELAP0DMC3 54 aa15.66■□□□□ 0.1
ATG4D-208ENST00000588667 SUB1P53999 127 aaKnown RBP eCLIP15.66■□□□□ 0.1
ATG4D-208ENST00000588667 NDUFA5Q16718 116 aa15.66■□□□□ 0.1
ATG4D-208ENST00000588667 OR5T1Q8NG75 326 aa15.66■□□□□ 0.1
ATG4D-208ENST00000588667 FAM110DQ8TAY7 271 aaPredicted RBP15.66■□□□□ 0.1
ATG4D-208ENST00000588667 GNPNAT1Q96EK6 184 aaPredicted RBP15.66■□□□□ 0.1
ATG4D-208ENST00000588667 UBE2E2Q96LR5 201 aa15.66■□□□□ 0.1
ATG4D-208ENST00000588667 SRSF8Q9BRL6 282 aaKnown RBP15.66■□□□□ 0.1
ATG4D-208ENST00000588667 GGACTQ9BVM4 153 aa15.66■□□□□ 0.1
ATG4D-208ENST00000588667 SLC25A32Q9H2D1 315 aa15.66■□□□□ 0.1
ATG4D-208ENST00000588667 UQCC1Q9NVA1 299 aa15.66■□□□□ 0.1
ATG4D-208ENST00000588667 NOTCH3Q9UM47 2321 aa15.65■□□□□ 0.1
ATG4D-208ENST00000588667 A0A1B0GW64 132 aa15.65■□□□□ 0.1
ATG4D-208ENST00000588667 BRI3O95415 125 aa15.65■□□□□ 0.1
ATG4D-208ENST00000588667 SEC11BP0C7V7 166 aa15.65■□□□□ 0.1
ATG4D-208ENST00000588667 OR13C7P0DN81 318 aa15.65■□□□□ 0.1
ATG4D-208ENST00000588667 WT1-ASQ06250 92 aa15.65■□□□□ 0.1
ATG4D-208ENST00000588667 KIAA0141Q14154 515 aaPredicted RBP15.65■□□□□ 0.1
ATG4D-208ENST00000588667 CLLU1Q5K131 121 aa15.65■□□□□ 0.1
ATG4D-208ENST00000588667 C18orf65Q6ZTR6 163 aa15.65■□□□□ 0.1
ATG4D-208ENST00000588667 ZNF491Q8N8L2 437 aa15.65■□□□□ 0.1
ATG4D-208ENST00000588667 TMEM170AQ8WVE7 144 aa15.65■□□□□ 0.1
ATG4D-208ENST00000588667 PARD6GQ9BYG4 376 aaPredicted RBP15.65■□□□□ 0.1
ATG4D-208ENST00000588667 RNASE2P10153 161 aaKnown RBP15.65■□□□□ 0.1
ATG4D-208ENST00000588667 SPP1P10451 314 aa15.65■□□□□ 0.1
ATG4D-208ENST00000588667 VWC2Q2TAL6 325 aa15.65■□□□□ 0.1
ATG4D-208ENST00000588667 FAM74A1Q5RGS3 127 aa15.65■□□□□ 0.1
ATG4D-208ENST00000588667 LRRC20Q8TCA0 184 aa15.65■□□□□ 0.1
ATG4D-208ENST00000588667 C4orf3Q8WVX3 66 aa15.65■□□□□ 0.1
ATG4D-208ENST00000588667 ZNF355PQ9NSJ1 428 aa15.65■□□□□ 0.1
ATG4D-208ENST00000588667 UBE2L5PA0A1B0GUS4 154 aa15.64■□□□□ 0.09
ATG4D-208ENST00000588667 IGLC7A0M8Q6 106 aa15.64■□□□□ 0.09
ATG4D-208ENST00000588667 TPPP2P59282 170 aa15.64■□□□□ 0.09
ATG4D-208ENST00000588667 DLK1P80370 383 aa15.64■□□□□ 0.09
ATG4D-208ENST00000588667 C8orf86Q6ZUL3 223 aa15.64■□□□□ 0.09
ATG4D-208ENST00000588667 TTC9CQ8N5M4 171 aa15.64■□□□□ 0.09
ATG4D-208ENST00000588667 RNF141Q8WVD5 230 aa15.64■□□□□ 0.09
ATG4D-208ENST00000588667 MS4A10Q96PG2 267 aa15.64■□□□□ 0.09
ATG4D-208ENST00000588667 NBEAL1Q6ZS30 2694 aa15.63■□□□□ 0.09
ATG4D-208ENST00000588667 PRSS46E5RG02 174 aa15.63■□□□□ 0.09
ATG4D-208ENST00000588667 TRGV3P03979 118 aa15.63■□□□□ 0.09
ATG4D-208ENST00000588667 ATP6V0CP27449 155 aa15.63■□□□□ 0.09
ATG4D-208ENST00000588667 WDR61Q9GZS3 305 aaKnown RBP15.63■□□□□ 0.09
ATG4D-208ENST00000588667 RPS10-NUDT3A0A1W2PQS6 291 aa15.62■□□□□ 0.09
ATG4D-208ENST00000588667 NPIPB5A8MRT5 1133 aa15.62■□□□□ 0.09
ATG4D-208ENST00000588667 PF4P02776 101 aa15.62■□□□□ 0.09
ATG4D-208ENST00000588667 ZNF114Q8NC26 417 aa15.62■□□□□ 0.09
ATG4D-208ENST00000588667 GNB4Q9HAV0 340 aa15.62■□□□□ 0.09
ATG4D-208ENST00000588667 RNASEH2CQ8TDP1 164 aaKnown RBP15.61■□□□□ 0.09
ATG4D-208ENST00000588667 P2RX4Q99571 388 aa15.61■□□□□ 0.09
ATG4D-208ENST00000588667 SH3BGRL3Q9H299 93 aa15.61■□□□□ 0.09
ATG4D-208ENST00000588667 NMBP08949 121 aa15.61■□□□□ 0.09
ATG4D-208ENST00000588667 AREGP15514 252 aa15.61■□□□□ 0.09
ATG4D-208ENST00000588667 RUNX1Q01196 453 aa15.61■□□□□ 0.09
ATG4D-208ENST00000588667 OR2G3Q8NGZ4 309 aa15.61■□□□□ 0.09
ATG4D-208ENST00000588667 SMCO3A2RU48 225 aa15.6■□□□□ 0.09
ATG4D-208ENST00000588667 FNDC10F2Z333 226 aa15.6■□□□□ 0.09
ATG4D-208ENST00000588667 CRYGCP07315 174 aa15.6■□□□□ 0.09
ATG4D-208ENST00000588667 SULT1A2P50226 295 aa15.6■□□□□ 0.09
ATG4D-208ENST00000588667 PCNPQ8WW12 178 aaKnown RBP15.6■□□□□ 0.09
ATG4D-208ENST00000588667 PSMG3Q9BT73 122 aaPredicted RBP15.6■□□□□ 0.09
ATG4D-208ENST00000588667 A0A0G2JLM5 398 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms