RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 IGHV7-81A0A0B4J1V7 117 aa9.95□□□□□ -0.82
VMP1-202ENST00000585847 UBE2L5PA0A1B0GUS4 154 aa9.95□□□□□ -0.82
VMP1-202ENST00000585847 WIPF1O43516 503 aa9.95□□□□□ -0.82
VMP1-202ENST00000585847 CFDP00746 253 aaPredicted RBP9.95□□□□□ -0.82
VMP1-202ENST00000585847 ATP6V0CP27449 155 aa9.95□□□□□ -0.82
VMP1-202ENST00000585847 OPRK1P41145 380 aa9.95□□□□□ -0.82
VMP1-202ENST00000585847 RAB2AP61019 212 aa9.95□□□□□ -0.82
VMP1-202ENST00000585847 SSBP2P81877 361 aaPredicted RBP9.95□□□□□ -0.82
VMP1-202ENST00000585847 C10orf55Q5SWW7 151 aa9.95□□□□□ -0.82
VMP1-202ENST00000585847 AKR1C8PQ5T2L2 129 aa9.95□□□□□ -0.82
VMP1-202ENST00000585847 PXDC1Q5TGL8 231 aa9.95□□□□□ -0.82
VMP1-202ENST00000585847 SLC16A13Q7RTY0 426 aa9.95□□□□□ -0.82
VMP1-202ENST00000585847 COMMD1Q8N668 190 aa9.95□□□□□ -0.82
VMP1-202ENST00000585847 HSD17B11Q8NBQ5 300 aa9.95□□□□□ -0.82
VMP1-202ENST00000585847 LFNGQ8NES3 379 aa9.95□□□□□ -0.82
VMP1-202ENST00000585847 FAM110DQ8TAY7 271 aaPredicted RBP9.95□□□□□ -0.82
VMP1-202ENST00000585847 TMEM170AQ8WVE7 144 aa9.95□□□□□ -0.82
VMP1-202ENST00000585847 ZNF702PQ9H963 129 aa9.95□□□□□ -0.82
VMP1-202ENST00000585847 PARP11Q9NR21 331 aa9.95□□□□□ -0.82
VMP1-202ENST00000585847 LSM4Q9Y4Z0 139 aaKnown RBP9.95□□□□□ -0.82
VMP1-202ENST00000585847 TNCP24821 2201 aa9.95□□□□□ -0.82
VMP1-202ENST00000585847 FBXO24O75426 580 aa9.94□□□□□ -0.82
VMP1-202ENST00000585847 HBE1P02100 147 aa9.94□□□□□ -0.82
VMP1-202ENST00000585847 OPN1MWP04001 364 aa9.94□□□□□ -0.82
VMP1-202ENST00000585847 OPN1MW2P0DN77 364 aa9.94□□□□□ -0.82
VMP1-202ENST00000585847 OPN1MW3P0DN78 364 aa9.94□□□□□ -0.82
VMP1-202ENST00000585847 DEFA4P12838 97 aa9.94□□□□□ -0.82
VMP1-202ENST00000585847 FGF7P21781 194 aa9.94□□□□□ -0.82
VMP1-202ENST00000585847 AKR1C1Q04828 323 aa9.94□□□□□ -0.82
VMP1-202ENST00000585847 ARL16Q0P5N6 197 aa9.94□□□□□ -0.82
VMP1-202ENST00000585847 BTNL8Q6UX41 500 aa9.94□□□□□ -0.82
VMP1-202ENST00000585847 S100A7AQ86SG5 101 aa9.94□□□□□ -0.82
VMP1-202ENST00000585847 Q8N2B8 174 aa9.94□□□□□ -0.82
VMP1-202ENST00000585847 TMEM116Q8NCL8 245 aa9.94□□□□□ -0.82
VMP1-202ENST00000585847 OR10W1Q8NGF6 305 aa9.94□□□□□ -0.82
VMP1-202ENST00000585847 NPCDR1Q9BY65 106 aa9.94□□□□□ -0.82
VMP1-202ENST00000585847 TRAV30A0A087WSZ9 112 aa9.93□□□□□ -0.82
VMP1-202ENST00000585847 A0A1B0GW64 132 aa9.93□□□□□ -0.82
VMP1-202ENST00000585847 TMEM89A2RUT3 159 aa9.93□□□□□ -0.82
VMP1-202ENST00000585847 LINC00862A6NCI5 91 aa9.93□□□□□ -0.82
VMP1-202ENST00000585847 AP4M1O00189 453 aa9.93□□□□□ -0.82
VMP1-202ENST00000585847 FCN1O00602 326 aa9.93□□□□□ -0.82
VMP1-202ENST00000585847 IGHG2P01859 326 aa9.93□□□□□ -0.82
VMP1-202ENST00000585847 NMBP08949 121 aa9.93□□□□□ -0.82
VMP1-202ENST00000585847 S100A7P31151 101 aa9.93□□□□□ -0.82
VMP1-202ENST00000585847 FCGR2BP31994 310 aaPredicted RBP9.93□□□□□ -0.82
VMP1-202ENST00000585847 RPL29P47914 159 aaKnown RBP9.93□□□□□ -0.82
VMP1-202ENST00000585847 TREML4Q6UXN2 200 aa9.93□□□□□ -0.82
VMP1-202ENST00000585847 C3orf56Q8N813 242 aa9.93□□□□□ -0.82
VMP1-202ENST00000585847 TMEM190Q8WZ59 177 aa9.93□□□□□ -0.82
VMP1-202ENST00000585847 TXN2Q99757 166 aa9.93□□□□□ -0.82
VMP1-202ENST00000585847 NPFFR1Q9GZQ6 430 aa9.93□□□□□ -0.82
VMP1-202ENST00000585847 PFDN2Q9UHV9 154 aa9.93□□□□□ -0.82
VMP1-202ENST00000585847 RNF24Q9Y225 148 aa9.93□□□□□ -0.82
VMP1-202ENST00000585847 TENM1Q9UKZ4 2725 aa9.93□□□□□ -0.82
VMP1-202ENST00000585847 TET2Q6N021 2002 aaPredicted RBP9.92□□□□□ -0.82
VMP1-202ENST00000585847 SMCO3A2RU48 225 aa9.92□□□□□ -0.82
VMP1-202ENST00000585847 LINC01548A6NM66 108 aa9.92□□□□□ -0.82
VMP1-202ENST00000585847 E7EUB6 86 aa9.92□□□□□ -0.82
VMP1-202ENST00000585847 NDUFA7O95182 113 aa9.92□□□□□ -0.82
VMP1-202ENST00000585847 PRH1P02810 166 aa9.92□□□□□ -0.82
VMP1-202ENST00000585847 MYOD1P15172 320 aa9.92□□□□□ -0.82
VMP1-202ENST00000585847 AREGP15514 252 aa9.92□□□□□ -0.82
VMP1-202ENST00000585847 NPBWR1P48145 328 aa9.92□□□□□ -0.82
VMP1-202ENST00000585847 CAMLGP49069 296 aa9.92□□□□□ -0.82
VMP1-202ENST00000585847 ACOT6Q3I5F7 207 aaPredicted RBP9.92□□□□□ -0.82
VMP1-202ENST00000585847 TMEM41BQ5BJD5 291 aa9.92□□□□□ -0.82
VMP1-202ENST00000585847 IL34Q6ZMJ4 242 aa9.92□□□□□ -0.82
VMP1-202ENST00000585847 SLC35E3Q7Z769 313 aa9.92□□□□□ -0.82
VMP1-202ENST00000585847 THAP8Q8NA92 274 aa9.92□□□□□ -0.82
VMP1-202ENST00000585847 OR4X1Q8NH49 305 aa9.92□□□□□ -0.82
VMP1-202ENST00000585847 VN1R17PQ8TDU5 208 aa9.92□□□□□ -0.82
VMP1-202ENST00000585847 BSCL2Q96G97 398 aaPredicted RBP9.92□□□□□ -0.82
VMP1-202ENST00000585847 CXorf58Q96LI9 332 aa9.92□□□□□ -0.82
VMP1-202ENST00000585847 RNF2Q99496 336 aa9.92□□□□□ -0.82
VMP1-202ENST00000585847 HSPB9Q9BQS6 159 aa9.92□□□□□ -0.82
VMP1-202ENST00000585847 C16orf95Q9H693 158 aa9.92□□□□□ -0.82
VMP1-202ENST00000585847 IGLV11-55A0A075B6I3 123 aa9.91□□□□□ -0.82
VMP1-202ENST00000585847 TRAV1-1A0A0B4J248 108 aa9.91□□□□□ -0.82
VMP1-202ENST00000585847 FAM223BA6NKX1 122 aa9.91□□□□□ -0.82
VMP1-202ENST00000585847 ZNF705EA8MWA4 302 aaPredicted RBP9.91□□□□□ -0.82
VMP1-202ENST00000585847 TSPAN15O95858 294 aa9.91□□□□□ -0.82
VMP1-202ENST00000585847 MT-CO2P00403 227 aa9.91□□□□□ -0.82
VMP1-202ENST00000585847 TAGLN2P37802 199 aaKnown RBP9.91□□□□□ -0.82
VMP1-202ENST00000585847 NDPQ00604 133 aa9.91□□□□□ -0.82
VMP1-202ENST00000585847 TMEM95Q3KNT9 176 aa9.91□□□□□ -0.82
VMP1-202ENST00000585847 ARSJQ5FYB0 599 aaPredicted RBP9.91□□□□□ -0.82
VMP1-202ENST00000585847 FAM223AQ8IWN6 122 aa9.91□□□□□ -0.82
VMP1-202ENST00000585847 NECAP1Q8NC96 275 aa9.91□□□□□ -0.82
VMP1-202ENST00000585847 LINC01006Q8NI28 216 aa9.91□□□□□ -0.82
VMP1-202ENST00000585847 TRGV9Q99603 122 aa9.91□□□□□ -0.82
VMP1-202ENST00000585847 WNT10AQ9GZT5 417 aa9.91□□□□□ -0.82
VMP1-202ENST00000585847 SERTAD4Q9NUC0 356 aa9.91□□□□□ -0.82
VMP1-202ENST00000585847 MEGF8Q7Z7M0 2845 aa9.91□□□□□ -0.82
VMP1-202ENST00000585847 TRAV41A0A0B4J266 112 aa9.9□□□□□ -0.82
VMP1-202ENST00000585847 M6PRP20645 277 aa9.9□□□□□ -0.82
VMP1-202ENST00000585847 GAMTQ14353 236 aa9.9□□□□□ -0.82
VMP1-202ENST00000585847 UQCC3Q6UW78 93 aa9.9□□□□□ -0.82
VMP1-202ENST00000585847 EIF4E3Q8N5X7 224 aaKnown RBP9.9□□□□□ -0.82
VMP1-202ENST00000585847 LYPD6BQ8NI32 183 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms