RNA–Protein interactions for RNA: ENST00000576353.5

SNF8-217, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-217ENST00000576353 TMED3Q9Y3Q3 217 aa17.73■□□□□ 0.43
SNF8-217ENST00000576353 RPS10-NUDT3A0A1W2PQS6 291 aa17.72■□□□□ 0.43
SNF8-217ENST00000576353 C15orf62A8K5M9 175 aa17.72■□□□□ 0.43
SNF8-217ENST00000576353 A8MZ25 164 aa17.72■□□□□ 0.43
SNF8-217ENST00000576353 YIF1AO95070 293 aa17.72■□□□□ 0.43
SNF8-217ENST00000576353 FRMD6-AS1P0C7T7 363 aa17.72■□□□□ 0.43
SNF8-217ENST00000576353 IGHV4-30-4P0DP06 118 aa17.72■□□□□ 0.43
SNF8-217ENST00000576353 SLC25A6P12236 298 aa17.72■□□□□ 0.43
SNF8-217ENST00000576353 BTNL8Q6UX41 500 aa17.72■□□□□ 0.43
SNF8-217ENST00000576353 RNASEH2CQ8TDP1 164 aaKnown RBP17.72■□□□□ 0.43
SNF8-217ENST00000576353 CCDC32Q9BV29 185 aa17.72■□□□□ 0.43
SNF8-217ENST00000576353 TRAV25A0A0B4J276 109 aa17.71■□□□□ 0.43
SNF8-217ENST00000576353 C9orf170A2RU37 121 aa17.71■□□□□ 0.43
SNF8-217ENST00000576353 SCGB2A1O75556 95 aa17.71■□□□□ 0.43
SNF8-217ENST00000576353 TMEM50AO95807 157 aa17.71■□□□□ 0.43
SNF8-217ENST00000576353 BTCP35070 178 aa17.71■□□□□ 0.43
SNF8-217ENST00000576353 TMEM61Q8N0U2 210 aa17.71■□□□□ 0.43
SNF8-217ENST00000576353 DTD1Q8TEA8 209 aa17.71■□□□□ 0.43
SNF8-217ENST00000576353 S100ZQ8WXG8 99 aa17.71■□□□□ 0.43
SNF8-217ENST00000576353 WDR89Q96FK6 387 aaPredicted RBP17.71■□□□□ 0.43
SNF8-217ENST00000576353 ASCL2Q99929 193 aa17.71■□□□□ 0.43
SNF8-217ENST00000576353 RBKSQ9H477 322 aa17.71■□□□□ 0.43
SNF8-217ENST00000576353 FNDC4Q9H6D8 234 aaPredicted RBP17.71■□□□□ 0.43
SNF8-217ENST00000576353 FLVCR2Q9UPI3 526 aa17.71■□□□□ 0.43
SNF8-217ENST00000576353 U3KQ87 197 aa17.71■□□□□ 0.43
SNF8-217ENST00000576353 NPY1RP25929 384 aa17.7■□□□□ 0.42
SNF8-217ENST00000576353 RBPMS2Q6ZRY4 209 aaKnown RBP17.7■□□□□ 0.42
SNF8-217ENST00000576353 OR4X1Q8NH49 305 aa17.7■□□□□ 0.42
SNF8-217ENST00000576353 IGHV3OR16-8A0A075B7F1 116 aa17.69■□□□□ 0.42
SNF8-217ENST00000576353 PLA2G10O15496 165 aa17.69■□□□□ 0.42
SNF8-217ENST00000576353 LYRM1O43325 122 aa17.69■□□□□ 0.42
SNF8-217ENST00000576353 PITX3O75364 302 aa17.69■□□□□ 0.42
SNF8-217ENST00000576353 CLN5O75503 358 aa17.69■□□□□ 0.42
SNF8-217ENST00000576353 IFNA10P01566 189 aa17.69■□□□□ 0.42
SNF8-217ENST00000576353 ATP5IP56385 69 aaPredicted RBP17.69■□□□□ 0.42
SNF8-217ENST00000576353 CD81P60033 236 aa17.69■□□□□ 0.42
SNF8-217ENST00000576353 MLANAQ16655 118 aa17.69■□□□□ 0.42
SNF8-217ENST00000576353 OR10C1Q96KK4 312 aa17.69■□□□□ 0.42
SNF8-217ENST00000576353 NEURL2Q9BR09 285 aa17.69■□□□□ 0.42
SNF8-217ENST00000576353 TUBA4BQ9H853 241 aa17.69■□□□□ 0.42
SNF8-217ENST00000576353 C19orf73Q9NVV2 129 aa17.69■□□□□ 0.42
SNF8-217ENST00000576353 SELENOKQ9Y6D0 94 aa17.69■□□□□ 0.42
SNF8-217ENST00000576353 HOXB5P09067 269 aa17.68■□□□□ 0.42
SNF8-217ENST00000576353 OR4E1P0C645 316 aa17.68■□□□□ 0.42
SNF8-217ENST00000576353 SLC25A4P12235 298 aa17.68■□□□□ 0.42
SNF8-217ENST00000576353 C4orf46Q504U0 113 aa17.68■□□□□ 0.42
SNF8-217ENST00000576353 LAMTOR1Q6IAA8 161 aa17.68■□□□□ 0.42
SNF8-217ENST00000576353 ETFRF1Q6IPR1 90 aa17.68■□□□□ 0.42
SNF8-217ENST00000576353 C11orf87Q6NUJ2 197 aa17.68■□□□□ 0.42
SNF8-217ENST00000576353 ZNF600Q6ZNG1 722 aa17.68■□□□□ 0.42
SNF8-217ENST00000576353 COQ8AQ8NI60 647 aa17.68■□□□□ 0.42
SNF8-217ENST00000576353 TRAV30A0A087WSZ9 112 aa17.67■□□□□ 0.42
SNF8-217ENST00000576353 FAM90A26D6RGX4 464 aa17.67■□□□□ 0.42
SNF8-217ENST00000576353 ZNF207O43670 478 aaKnown RBP17.67■□□□□ 0.42
SNF8-217ENST00000576353 SCAF4O95104 1147 aaKnown RBP17.67■□□□□ 0.42
SNF8-217ENST00000576353 DHRS2Q13268 280 aa17.67■□□□□ 0.42
SNF8-217ENST00000576353 SLC16A13Q7RTY0 426 aa17.67■□□□□ 0.42
SNF8-217ENST00000576353 LYG2Q86SG7 212 aa17.67■□□□□ 0.42
SNF8-217ENST00000576353 SBSPONQ8IVN8 264 aa17.67■□□□□ 0.42
SNF8-217ENST00000576353 ZNF414Q96IQ9 312 aa17.67■□□□□ 0.42
SNF8-217ENST00000576353 GINS3Q9BRX5 216 aa17.67■□□□□ 0.42
SNF8-217ENST00000576353 SMPXQ9UHP9 88 aa17.67■□□□□ 0.42
SNF8-217ENST00000576353 TRAV14DV4A0A0A6YYC5 116 aa17.66■□□□□ 0.42
SNF8-217ENST00000576353 MED6O75586 246 aa17.66■□□□□ 0.42
SNF8-217ENST00000576353 ANXA7P20073 488 aaKnown RBP17.66■□□□□ 0.42
SNF8-217ENST00000576353 GGNBP1Q5YKI7 109 aa17.66■□□□□ 0.42
SNF8-217ENST00000576353 TOMM20LQ6UXN7 152 aa17.66■□□□□ 0.42
SNF8-217ENST00000576353 TMEM170AQ8WVE7 144 aa17.66■□□□□ 0.42
SNF8-217ENST00000576353 BATF3Q9NR55 127 aa17.66■□□□□ 0.42
SNF8-217ENST00000576353 PTTG2Q9NZH5 202 aa17.66■□□□□ 0.42
SNF8-217ENST00000576353 MRPL36Q9P0J6 103 aaKnown RBP17.66■□□□□ 0.42
SNF8-217ENST00000576353 IGHV7-4-1A0A0J9YVY3 117 aa17.65■□□□□ 0.42
SNF8-217ENST00000576353 CD7P09564 240 aa17.65■□□□□ 0.42
SNF8-217ENST00000576353 PRSS54Q6PEW0 395 aa17.65■□□□□ 0.42
SNF8-217ENST00000576353 TMEM116Q8NCL8 245 aa17.65■□□□□ 0.42
SNF8-217ENST00000576353 OR52B4Q8NGK2 314 aa17.65■□□□□ 0.42
SNF8-217ENST00000576353 PUS1Q9Y606 427 aaKnown RBP eCLIP17.65■□□□□ 0.42
SNF8-217ENST00000576353 U3KQK5 164 aa17.65■□□□□ 0.42
SNF8-217ENST00000576353 TSPAN4O14817 238 aa17.64■□□□□ 0.41
SNF8-217ENST00000576353 IFNA21P01568 189 aa17.64■□□□□ 0.41
SNF8-217ENST00000576353 BMI1P35226 326 aa17.64■□□□□ 0.41
SNF8-217ENST00000576353 CIB3Q96Q77 187 aaPredicted RBP17.64■□□□□ 0.41
SNF8-217ENST00000576353 SPAG8Q99932 426 aaPredicted RBP17.64■□□□□ 0.41
SNF8-217ENST00000576353 RHPN1-AS1Q9BWJ2 59 aa17.64■□□□□ 0.41
SNF8-217ENST00000576353 C20orf85Q9H1P6 137 aa17.64■□□□□ 0.41
SNF8-217ENST00000576353 OR11H12B2RN74 326 aa17.63■□□□□ 0.41
SNF8-217ENST00000576353 TCRBP04435 133 aa17.63■□□□□ 0.41
SNF8-217ENST00000576353 IFNA4P05014 189 aa17.63■□□□□ 0.41
SNF8-217ENST00000576353 RND2P52198 227 aa17.63■□□□□ 0.41
SNF8-217ENST00000576353 OR1S2Q8NGQ3 325 aa17.63■□□□□ 0.41
SNF8-217ENST00000576353 CHEK1O14757 476 aa17.62■□□□□ 0.41
SNF8-217ENST00000576353 ADAP1O75689 374 aa17.62■□□□□ 0.41
SNF8-217ENST00000576353 WDR12Q9GZL7 423 aaKnown RBP17.62■□□□□ 0.41
SNF8-217ENST00000576353 ZMAT4Q9H898 229 aa17.62■□□□□ 0.41
SNF8-217ENST00000576353 SYNGR2O43760 224 aa17.61■□□□□ 0.41
SNF8-217ENST00000576353 IGKV1-17P01599 117 aa17.61■□□□□ 0.41
SNF8-217ENST00000576353 RPP30P78346 268 aaKnown RBP17.61■□□□□ 0.41
SNF8-217ENST00000576353 ZNF846Q147U1 533 aa17.61■□□□□ 0.41
SNF8-217ENST00000576353 TIGITQ495A1 244 aa17.61■□□□□ 0.41
SNF8-217ENST00000576353 MZT2BQ6NZ67 158 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms