RNA–Protein interactions for RNA: ENST00000566808.2

CDH3-205, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-205ENST00000566808 DAD1P61803 113 aa11.82□□□□□ -0.52
CDH3-205ENST00000566808 PACRGLQ8N7B6 248 aa11.82□□□□□ -0.52
CDH3-205ENST00000566808 FRZBQ92765 325 aa11.82□□□□□ -0.52
CDH3-205ENST00000566808 HLA-DRB4X5D2U9 266 aa11.82□□□□□ -0.52
CDH3-205ENST00000566808 RLN1P04808 185 aa11.81□□□□□ -0.52
CDH3-205ENST00000566808 PTHLHP12272 177 aa11.81□□□□□ -0.52
CDH3-205ENST00000566808 MLLT11Q13015 90 aaPredicted RBP11.81□□□□□ -0.52
CDH3-205ENST00000566808 GSG1LQ6UXU4 331 aa11.81□□□□□ -0.52
CDH3-205ENST00000566808 TSPAN14Q8NG11 270 aa11.81□□□□□ -0.52
CDH3-205ENST00000566808 FCAMRQ8WWV6 532 aa11.81□□□□□ -0.52
CDH3-205ENST00000566808 SEPSECSQ9HD40 501 aaKnown RBP11.81□□□□□ -0.52
CDH3-205ENST00000566808 YTHDF2Q9Y5A9 579 aaKnown RBP11.81□□□□□ -0.52
CDH3-205ENST00000566808 FAM90A26D6RGX4 464 aa11.8□□□□□ -0.52
CDH3-205ENST00000566808 PTGES3LE9PB15 166 aa11.8□□□□□ -0.52
CDH3-205ENST00000566808 RAB3BP20337 219 aa11.8□□□□□ -0.52
CDH3-205ENST00000566808 MYL9P24844 172 aa11.8□□□□□ -0.52
CDH3-205ENST00000566808 CCL18P55774 89 aa11.8□□□□□ -0.52
CDH3-205ENST00000566808 PRCDQ00LT1 54 aa11.8□□□□□ -0.52
CDH3-205ENST00000566808 TTC32Q5I0X7 151 aa11.8□□□□□ -0.52
CDH3-205ENST00000566808 LYPD1Q8N2G4 141 aa11.8□□□□□ -0.52
CDH3-205ENST00000566808 LOC102723971A0A1B0GUV8 181 aa11.79□□□□□ -0.52
CDH3-205ENST00000566808 SCGB2A1O75556 95 aa11.79□□□□□ -0.52
CDH3-205ENST00000566808 TMEM50AO95807 157 aa11.79□□□□□ -0.52
CDH3-205ENST00000566808 LPAR6P43657 344 aa11.79□□□□□ -0.52
CDH3-205ENST00000566808 HOXA1P49639 335 aaPredicted RBP11.79□□□□□ -0.52
CDH3-205ENST00000566808 PPP5CP53041 499 aa11.79□□□□□ -0.52
CDH3-205ENST00000566808 AP2S1P53680 142 aaPredicted RBP11.79□□□□□ -0.52
CDH3-205ENST00000566808 HERV-K104P61576 105 aa11.79□□□□□ -0.52
CDH3-205ENST00000566808 GLMPQ8WWB7 406 aa11.79□□□□□ -0.52
CDH3-205ENST00000566808 HBE1P02100 147 aa11.78□□□□□ -0.52
CDH3-205ENST00000566808 ERHP84090 104 aaKnown RBP11.78□□□□□ -0.52
CDH3-205ENST00000566808 HOGA1Q86XE5 327 aa11.78□□□□□ -0.52
CDH3-205ENST00000566808 PTTG2Q9NZH5 202 aa11.78□□□□□ -0.52
CDH3-205ENST00000566808 DAPK2Q9UIK4 370 aa11.78□□□□□ -0.52
CDH3-205ENST00000566808 GOLT1BQ9Y3E0 138 aa11.78□□□□□ -0.52
CDH3-205ENST00000566808 TMEM230Q96A57 120 aa11.77□□□□□ -0.53
CDH3-205ENST00000566808 NRN1Q9NPD7 142 aa11.77□□□□□ -0.53
CDH3-205ENST00000566808 LINC00588Q9Y4M8 146 aa11.77□□□□□ -0.53
CDH3-205ENST00000566808 U3KQE9 123 aa11.77□□□□□ -0.53
CDH3-205ENST00000566808 RPS10-NUDT3A0A1W2PQS6 291 aa11.76□□□□□ -0.53
CDH3-205ENST00000566808 CORTO00230 105 aa11.76□□□□□ -0.53
CDH3-205ENST00000566808 PGLYRP1O75594 196 aaPredicted RBP11.76□□□□□ -0.53
CDH3-205ENST00000566808 NUDT3O95989 172 aa11.76□□□□□ -0.53
CDH3-205ENST00000566808 NKX2-1P43699 371 aaPredicted RBP11.76□□□□□ -0.53
CDH3-205ENST00000566808 C16orf54Q6UWD8 224 aa11.76□□□□□ -0.53
CDH3-205ENST00000566808 OR4A16Q8NH70 328 aa11.76□□□□□ -0.53
CDH3-205ENST00000566808 KRTAP1-5Q9BYS1 174 aa11.76□□□□□ -0.53
CDH3-205ENST00000566808 SCN3BQ9NY72 215 aa11.76□□□□□ -0.53
CDH3-205ENST00000566808 CLN5O75503 358 aa11.75□□□□□ -0.53
CDH3-205ENST00000566808 IGKV3-20P01619 116 aa11.75□□□□□ -0.53
CDH3-205ENST00000566808 FXYD7P58549 80 aa11.75□□□□□ -0.53
CDH3-205ENST00000566808 RRN3P1Q2M238 152 aa11.75□□□□□ -0.53
CDH3-205ENST00000566808 CMTM1Q8IZ96 169 aa11.75□□□□□ -0.53
CDH3-205ENST00000566808 ZNF709Q8N972 641 aa11.75□□□□□ -0.53
CDH3-205ENST00000566808 LGALS14Q8TCE9 139 aa11.75□□□□□ -0.53
CDH3-205ENST00000566808 CLUHP3Q96NS8 147 aa11.75□□□□□ -0.53
CDH3-205ENST00000566808 MGLLQ99685 303 aa11.75□□□□□ -0.53
CDH3-205ENST00000566808 Q9H3A6 140 aa11.75□□□□□ -0.53
CDH3-205ENST00000566808 HNRNPCP07910 306 aaKnown RBP eCLIP11.74□□□□□ -0.53
CDH3-205ENST00000566808 SNCAP37840 140 aa11.74□□□□□ -0.53
CDH3-205ENST00000566808 XGP55808 180 aa11.74□□□□□ -0.53
CDH3-205ENST00000566808 HSPE1P61604 102 aaKnown RBP11.74□□□□□ -0.53
CDH3-205ENST00000566808 OR5AP2Q8NGF4 316 aa11.74□□□□□ -0.53
CDH3-205ENST00000566808 C7orf50Q9BRJ6 194 aaKnown RBP11.74□□□□□ -0.53
CDH3-205ENST00000566808 J3QL48 77 aa11.73□□□□□ -0.53
CDH3-205ENST00000566808 IGKV1-17P01599 117 aa11.73□□□□□ -0.53
CDH3-205ENST00000566808 GDF5OSQ5U4N7 250 aa11.73□□□□□ -0.53
CDH3-205ENST00000566808 SSX7Q7RTT5 188 aa11.73□□□□□ -0.53
CDH3-205ENST00000566808 H2BFWTQ7Z2G1 175 aa11.73□□□□□ -0.53
CDH3-205ENST00000566808 OR4X1Q8NH49 305 aa11.73□□□□□ -0.53
CDH3-205ENST00000566808 SAV1Q9H4B6 383 aaPredicted RBP11.73□□□□□ -0.53
CDH3-205ENST00000566808 FAM212BQ9NTI7 297 aaPredicted RBP11.73□□□□□ -0.53
CDH3-205ENST00000566808 RHBDL2Q9NX52 303 aa11.73□□□□□ -0.53
CDH3-205ENST00000566808 MRPL36Q9P0J6 103 aaKnown RBP11.73□□□□□ -0.53
CDH3-205ENST00000566808 SMIM30A4D0T7 59 aa11.72□□□□□ -0.53
CDH3-205ENST00000566808 LYRM9A8MSI8 78 aa11.72□□□□□ -0.53
CDH3-205ENST00000566808 CLINT1Q14677 625 aa11.72□□□□□ -0.53
CDH3-205ENST00000566808 CDPF1Q6NVV7 123 aa11.72□□□□□ -0.53
CDH3-205ENST00000566808 SIGLEC15Q6ZMC9 328 aa11.72□□□□□ -0.53
CDH3-205ENST00000566808 C1orf158Q8N1D5 194 aa11.72□□□□□ -0.53
CDH3-205ENST00000566808 SEC22AQ96IW7 307 aa11.72□□□□□ -0.53
CDH3-205ENST00000566808 Q9H8V8 135 aa11.72□□□□□ -0.53
CDH3-205ENST00000566808 TRAV30A0A087WSZ9 112 aa11.71□□□□□ -0.53
CDH3-205ENST00000566808 A0A1W2PPQ1 181 aa11.71□□□□□ -0.53
CDH3-205ENST00000566808 NOTOA8MTQ0 251 aa11.71□□□□□ -0.53
CDH3-205ENST00000566808 F5H768 121 aa11.71□□□□□ -0.53
CDH3-205ENST00000566808 INS-IGF2F8WCM5 200 aa11.71□□□□□ -0.53
CDH3-205ENST00000566808 RGS10O43665 173 aa11.71□□□□□ -0.53
CDH3-205ENST00000566808 OPRK1P41145 380 aa11.71□□□□□ -0.53
CDH3-205ENST00000566808 TIGITQ495A1 244 aa11.71□□□□□ -0.53
CDH3-205ENST00000566808 FOXI2Q6ZQN5 318 aa11.71□□□□□ -0.53
CDH3-205ENST00000566808 SLC35B3Q9H1N7 401 aa11.71□□□□□ -0.53
CDH3-205ENST00000566808 FNDC4Q9H6D8 234 aaPredicted RBP11.71□□□□□ -0.53
CDH3-205ENST00000566808 SCPEP1Q9HB40 452 aa11.71□□□□□ -0.53
CDH3-205ENST00000566808 NDUFB11Q9NX14 153 aa11.71□□□□□ -0.53
CDH3-205ENST00000566808 PGPEP1Q9NXJ5 209 aa11.71□□□□□ -0.53
CDH3-205ENST00000566808 EHFQ9NZC4 300 aa11.71□□□□□ -0.53
CDH3-205ENST00000566808 TPRKBQ9Y3C4 175 aa11.71□□□□□ -0.53
CDH3-205ENST00000566808 GPR31O00270 319 aa11.7□□□□□ -0.54
CDH3-205ENST00000566808 GSTZ1O43708 216 aaPredicted RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms