RNA–Protein interactions for RNA: ENST00000560521.5

RABGGTA-217, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 680 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-217ENST00000560521 P2RY1P47900 373 aa6.28□□□□□ -1.4
RABGGTA-217ENST00000560521 PPP5CP53041 499 aa6.28□□□□□ -1.4
RABGGTA-217ENST00000560521 NUTF2P61970 127 aaKnown RBP6.28□□□□□ -1.4
RABGGTA-217ENST00000560521 ARL6IP1Q15041 203 aa6.28□□□□□ -1.4
RABGGTA-217ENST00000560521 TBCEQ15813 527 aaPredicted RBP6.28□□□□□ -1.4
RABGGTA-217ENST00000560521 PSMG4Q5JS54 123 aa6.28□□□□□ -1.4
RABGGTA-217ENST00000560521 CROCCP3Q8IVE0 287 aa6.28□□□□□ -1.4
RABGGTA-217ENST00000560521 CADM3Q8N126 398 aa6.28□□□□□ -1.4
RABGGTA-217ENST00000560521 C15orf53Q8NAA6 179 aa6.28□□□□□ -1.4
RABGGTA-217ENST00000560521 PINX1Q96BK5 328 aaKnown RBP6.28□□□□□ -1.4
RABGGTA-217ENST00000560521 MOB3AQ96BX8 217 aa6.28□□□□□ -1.4
RABGGTA-217ENST00000560521 ATG101Q9BSB4 218 aa6.28□□□□□ -1.4
RABGGTA-217ENST00000560521 SLC5A7Q9GZV3 580 aa6.28□□□□□ -1.4
RABGGTA-217ENST00000560521 IGHV3OR16-12A0A075B7B8 117 aa6.27□□□□□ -1.41
RABGGTA-217ENST00000560521 PTGES3LE9PB15 166 aa6.27□□□□□ -1.41
RABGGTA-217ENST00000560521 SNAPC5O75971 98 aa6.27□□□□□ -1.41
RABGGTA-217ENST00000560521 KRASP01116 189 aa6.27□□□□□ -1.41
RABGGTA-217ENST00000560521 G6PCP35575 357 aa6.27□□□□□ -1.41
RABGGTA-217ENST00000560521 LPAR6P43657 344 aa6.27□□□□□ -1.41
RABGGTA-217ENST00000560521 FXYD7P58549 80 aa6.27□□□□□ -1.41
RABGGTA-217ENST00000560521 FXYD4P59646 89 aa6.27□□□□□ -1.41
RABGGTA-217ENST00000560521 ERVK-16P61578 105 aa6.27□□□□□ -1.41
RABGGTA-217ENST00000560521 DHRS2Q13268 280 aa6.27□□□□□ -1.41
RABGGTA-217ENST00000560521 TRAM1Q15629 374 aa6.27□□□□□ -1.41
RABGGTA-217ENST00000560521 AADACL3Q5VUY0 350 aa6.27□□□□□ -1.41
RABGGTA-217ENST00000560521 ZNF114Q8NC26 417 aa6.27□□□□□ -1.41
RABGGTA-217ENST00000560521 FCAMRQ8WWV6 532 aa6.27□□□□□ -1.41
RABGGTA-217ENST00000560521 C18orf15Q96N68 181 aa6.27□□□□□ -1.41
RABGGTA-217ENST00000560521 LINC00588Q9Y4M8 146 aa6.27□□□□□ -1.41
RABGGTA-217ENST00000560521 RFNGQ9Y644 331 aa6.27□□□□□ -1.41
RABGGTA-217ENST00000560521 SRRM2Q9UQ35 2752 aaKnown RBP6.26□□□□□ -1.41
RABGGTA-217ENST00000560521 TEX48A0A1B0GUV7 120 aa6.26□□□□□ -1.41
RABGGTA-217ENST00000560521 HELTA6NFD8 242 aa6.26□□□□□ -1.41
RABGGTA-217ENST00000560521 CCDC160A6NGH7 325 aa6.26□□□□□ -1.41
RABGGTA-217ENST00000560521 TMEM127O75204 238 aa6.26□□□□□ -1.41
RABGGTA-217ENST00000560521 HSMCR30P0CW71 290 aa6.26□□□□□ -1.41
RABGGTA-217ENST00000560521 F2RP25116 425 aa6.26□□□□□ -1.41
RABGGTA-217ENST00000560521 PSMA1P25786 263 aaKnown RBP6.26□□□□□ -1.41
RABGGTA-217ENST00000560521 GNRHRP30968 328 aa6.26□□□□□ -1.41
RABGGTA-217ENST00000560521 NPBWR1P48145 328 aa6.26□□□□□ -1.41
RABGGTA-217ENST00000560521 GNG2P59768 71 aa6.26□□□□□ -1.41
RABGGTA-217ENST00000560521 GDF5OSQ5U4N7 250 aa6.26□□□□□ -1.41
RABGGTA-217ENST00000560521 TPRA1Q86W33 373 aa6.26□□□□□ -1.41
RABGGTA-217ENST00000560521 BEST4Q8NFU0 473 aa6.26□□□□□ -1.41
RABGGTA-217ENST00000560521 METTL26Q96S19 204 aa6.26□□□□□ -1.41
RABGGTA-217ENST00000560521 KRTAP1-5Q9BYS1 174 aa6.26□□□□□ -1.41
RABGGTA-217ENST00000560521 RBM38Q9H0Z9 239 aaKnown RBP6.26□□□□□ -1.41
RABGGTA-217ENST00000560521 FKBP11Q9NYL4 201 aa6.26□□□□□ -1.41
RABGGTA-217ENST00000560521 PRNDQ9UKY0 176 aa6.26□□□□□ -1.41
RABGGTA-217ENST00000560521 U3KQE9 123 aa6.26□□□□□ -1.41
RABGGTA-217ENST00000560521 TRAV1-2A0A0B4J238 106 aa6.25□□□□□ -1.41
RABGGTA-217ENST00000560521 PDCD5O14737 125 aa6.25□□□□□ -1.41
RABGGTA-217ENST00000560521 HLA-DRB4P13762 266 aa6.25□□□□□ -1.41
RABGGTA-217ENST00000560521 BTF3P20290 206 aaKnown RBP6.25□□□□□ -1.41
RABGGTA-217ENST00000560521 ARPC4P59998 168 aa6.25□□□□□ -1.41
RABGGTA-217ENST00000560521 DEFB1P60022 68 aa6.25□□□□□ -1.41
RABGGTA-217ENST00000560521 DAD1P61803 113 aa6.25□□□□□ -1.41
RABGGTA-217ENST00000560521 CNPY1Q3B7I2 92 aa6.25□□□□□ -1.41
RABGGTA-217ENST00000560521 C16orf54Q6UWD8 224 aa6.25□□□□□ -1.41
RABGGTA-217ENST00000560521 GSG1LQ6UXU4 331 aa6.25□□□□□ -1.41
RABGGTA-217ENST00000560521 TMEM17Q86X19 198 aa6.25□□□□□ -1.41
RABGGTA-217ENST00000560521 SPARTQ8N0X7 666 aa6.25□□□□□ -1.41
RABGGTA-217ENST00000560521 S100ZQ8WXG8 99 aa6.25□□□□□ -1.41
RABGGTA-217ENST00000560521 MRPL36Q9P0J6 103 aaKnown RBP6.25□□□□□ -1.41
RABGGTA-217ENST00000560521 MDFICQ9P1T7 246 aa6.25□□□□□ -1.41
RABGGTA-217ENST00000560521 YTHDF2Q9Y5A9 579 aaKnown RBP6.25□□□□□ -1.41
RABGGTA-217ENST00000560521 HLA-DRB4X5D2U9 266 aa6.25□□□□□ -1.41
RABGGTA-217ENST00000560521 FAM90A26D6RGX4 464 aa6.24□□□□□ -1.41
RABGGTA-217ENST00000560521 PGLYRP1O75594 196 aaPredicted RBP6.24□□□□□ -1.41
RABGGTA-217ENST00000560521 RLN1P04808 185 aa6.24□□□□□ -1.41
RABGGTA-217ENST00000560521 RAB3BP20337 219 aa6.24□□□□□ -1.41
RABGGTA-217ENST00000560521 FUSP35637 526 aaKnown RBP eCLIP6.24□□□□□ -1.41
RABGGTA-217ENST00000560521 AP2S1P53680 142 aaPredicted RBP6.24□□□□□ -1.41
RABGGTA-217ENST00000560521 PRCDQ00LT1 54 aa6.24□□□□□ -1.41
RABGGTA-217ENST00000560521 MLLT11Q13015 90 aaPredicted RBP6.24□□□□□ -1.41
RABGGTA-217ENST00000560521 MLANAQ16655 118 aa6.24□□□□□ -1.41
RABGGTA-217ENST00000560521 HOGA1Q86XE5 327 aa6.24□□□□□ -1.41
RABGGTA-217ENST00000560521 C1orf158Q8N1D5 194 aa6.24□□□□□ -1.41
RABGGTA-217ENST00000560521 ZNF709Q8N972 641 aa6.24□□□□□ -1.41
RABGGTA-217ENST00000560521 LGALS14Q8TCE9 139 aa6.24□□□□□ -1.41
RABGGTA-217ENST00000560521 GLMPQ8WWB7 406 aa6.24□□□□□ -1.41
RABGGTA-217ENST00000560521 FRZBQ92765 325 aa6.24□□□□□ -1.41
RABGGTA-217ENST00000560521 Q9H8V8 135 aa6.24□□□□□ -1.41
RABGGTA-217ENST00000560521 SEPSECSQ9HD40 501 aaKnown RBP6.24□□□□□ -1.41
RABGGTA-217ENST00000560521 ACOT13Q9NPJ3 140 aa6.24□□□□□ -1.41
RABGGTA-217ENST00000560521 UBR4Q5T4S7 5183 aa6.23□□□□□ -1.41
RABGGTA-217ENST00000560521 LOC102723971A0A1B0GUV8 181 aa6.23□□□□□ -1.41
RABGGTA-217ENST00000560521 RPS10-NUDT3A0A1W2PQS6 291 aa6.23□□□□□ -1.41
RABGGTA-217ENST00000560521 CLN5O75503 358 aa6.23□□□□□ -1.41
RABGGTA-217ENST00000560521 GABARAPO95166 117 aa6.23□□□□□ -1.41
RABGGTA-217ENST00000560521 NUDT3O95989 172 aa6.23□□□□□ -1.41
RABGGTA-217ENST00000560521 IGKV3-20P01619 116 aa6.23□□□□□ -1.41
RABGGTA-217ENST00000560521 FCER2P06734 321 aa6.23□□□□□ -1.41
RABGGTA-217ENST00000560521 CCL18P55774 89 aa6.23□□□□□ -1.41
RABGGTA-217ENST00000560521 HSPE1P61604 102 aaKnown RBP6.23□□□□□ -1.41
RABGGTA-217ENST00000560521 SNRPD3P62318 126 aaKnown RBP6.23□□□□□ -1.41
RABGGTA-217ENST00000560521 DLK1P80370 383 aa6.23□□□□□ -1.41
RABGGTA-217ENST00000560521 ERHP84090 104 aaKnown RBP6.23□□□□□ -1.41
RABGGTA-217ENST00000560521 TMEM230Q96A57 120 aa6.23□□□□□ -1.41
RABGGTA-217ENST00000560521 CCDC90BQ9GZT6 254 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms