RNA–Protein interactions for RNA: ENST00000559933.1

SPG11-220, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 2

Gene SPG11, Length 518 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-220ENST00000559933 CTRB2Q6GPI1 263 aa4.06□□□□□ -1.76
SPG11-220ENST00000559933 LAMTOR1Q6IAA8 161 aa4.06□□□□□ -1.76
SPG11-220ENST00000559933 ACOT7LQ6ZUV0 252 aa4.06□□□□□ -1.76
SPG11-220ENST00000559933 C16orf82Q7Z2V1 217 aa4.06□□□□□ -1.76
SPG11-220ENST00000559933 NOXA1Q86UR1 476 aa4.06□□□□□ -1.76
SPG11-220ENST00000559933 STPG2Q8N412 459 aa4.06□□□□□ -1.76
SPG11-220ENST00000559933 C9orf62Q8N4C0 152 aa4.06□□□□□ -1.76
SPG11-220ENST00000559933 TMEM86BQ8N661 226 aa4.06□□□□□ -1.76
SPG11-220ENST00000559933 TMEM252Q8N6L7 170 aa4.06□□□□□ -1.76
SPG11-220ENST00000559933 SGMS2Q8NHU3 365 aa4.06□□□□□ -1.76
SPG11-220ENST00000559933 THAP6Q8TBB0 222 aa4.06□□□□□ -1.76
SPG11-220ENST00000559933 C16orf92Q96LL3 132 aa4.06□□□□□ -1.76
SPG11-220ENST00000559933 OR5B12Q96R08 314 aa4.06□□□□□ -1.76
SPG11-220ENST00000559933 AIFM2Q9BRQ8 373 aa4.06□□□□□ -1.76
SPG11-220ENST00000559933 KLK15Q9H2R5 256 aa4.06□□□□□ -1.76
SPG11-220ENST00000559933 FNDC4Q9H6D8 234 aaPredicted RBP4.06□□□□□ -1.76
SPG11-220ENST00000559933 WFDC1Q9HC57 220 aa4.06□□□□□ -1.76
SPG11-220ENST00000559933 ZNF355PQ9NSJ1 428 aa4.06□□□□□ -1.76
SPG11-220ENST00000559933 LYRM2Q9NU23 88 aaPredicted RBP4.06□□□□□ -1.76
SPG11-220ENST00000559933 FBXL17Q9UF56 701 aa4.06□□□□□ -1.76
SPG11-220ENST00000559933 TNFSF18Q9UNG2 199 aa4.06□□□□□ -1.76
SPG11-220ENST00000559933 FBN1P35555 2871 aaKnown RBP4.05□□□□□ -1.76
SPG11-220ENST00000559933 IGLV11-55A0A075B6I3 123 aa4.05□□□□□ -1.76
SPG11-220ENST00000559933 UBE2L5PA0A1B0GUS4 154 aa4.05□□□□□ -1.76
SPG11-220ENST00000559933 SMCO3A2RU48 225 aa4.05□□□□□ -1.76
SPG11-220ENST00000559933 NPIPB5A8MRT5 1133 aa4.05□□□□□ -1.76
SPG11-220ENST00000559933 PRSS46E5RG02 174 aa4.05□□□□□ -1.76
SPG11-220ENST00000559933 E5RGE8 158 aa4.05□□□□□ -1.76
SPG11-220ENST00000559933 CLDN34H7C241 214 aa4.05□□□□□ -1.76
SPG11-220ENST00000559933 K7EIM0 57 aa4.05□□□□□ -1.76
SPG11-220ENST00000559933 M0QZK8 103 aa4.05□□□□□ -1.76
SPG11-220ENST00000559933 TSC22D2O75157 780 aa4.05□□□□□ -1.76
SPG11-220ENST00000559933 MED6O75586 246 aa4.05□□□□□ -1.76
SPG11-220ENST00000559933 MT-CO2P00403 227 aa4.05□□□□□ -1.76
SPG11-220ENST00000559933 TRBV12-3P01733 135 aa4.05□□□□□ -1.76
SPG11-220ENST00000559933 IGHV3-11P01762 117 aa4.05□□□□□ -1.76
SPG11-220ENST00000559933 IFNA4P05014 189 aa4.05□□□□□ -1.76
SPG11-220ENST00000559933 IGF1P05019 195 aa4.05□□□□□ -1.76
SPG11-220ENST00000559933 HNRNPCP07910 306 aaKnown RBP eCLIP4.05□□□□□ -1.76
SPG11-220ENST00000559933 PET100P0DJ07 73 aa4.05□□□□□ -1.76
SPG11-220ENST00000559933 PF4V1P10720 104 aa4.05□□□□□ -1.76
SPG11-220ENST00000559933 CD28P10747 220 aa4.05□□□□□ -1.76
SPG11-220ENST00000559933 RPL12P30050 165 aaKnown RBP4.05□□□□□ -1.76
SPG11-220ENST00000559933 PPIFP30405 207 aaKnown RBP4.05□□□□□ -1.76
SPG11-220ENST00000559933 P2RY1P47900 373 aa4.05□□□□□ -1.76
SPG11-220ENST00000559933 CRIP2P52943 208 aaPredicted RBP4.05□□□□□ -1.76
SPG11-220ENST00000559933 RPL23AP62750 156 aaKnown RBP4.05□□□□□ -1.76
SPG11-220ENST00000559933 CFHR3Q02985 330 aa4.05□□□□□ -1.76
SPG11-220ENST00000559933 SLC38A11Q08AI6 406 aa4.05□□□□□ -1.76
SPG11-220ENST00000559933 KRTAP24-1Q3LI83 254 aa4.05□□□□□ -1.76
SPG11-220ENST00000559933 LGALSLQ3ZCW2 172 aaPredicted RBP4.05□□□□□ -1.76
SPG11-220ENST00000559933 TCTEX1D4Q5JR98 221 aa4.05□□□□□ -1.76
SPG11-220ENST00000559933 SLC25A24Q6NUK1 477 aa4.05□□□□□ -1.76
SPG11-220ENST00000559933 TMEM14EPQ6UXP3 125 aa4.05□□□□□ -1.76
SPG11-220ENST00000559933 ZNF546Q86UE3 836 aa4.05□□□□□ -1.76
SPG11-220ENST00000559933 Q8N2B8 174 aa4.05□□□□□ -1.76
SPG11-220ENST00000559933 TTC9CQ8N5M4 171 aa4.05□□□□□ -1.76
SPG11-220ENST00000559933 KLHDC1Q8N7A1 406 aa4.05□□□□□ -1.76
SPG11-220ENST00000559933 OR2T6Q8NHC8 308 aa4.05□□□□□ -1.76
SPG11-220ENST00000559933 LINC01006Q8NI28 216 aa4.05□□□□□ -1.76
SPG11-220ENST00000559933 FAM110DQ8TAY7 271 aaPredicted RBP4.05□□□□□ -1.76
SPG11-220ENST00000559933 SMIM8Q96KF7 97 aa4.05□□□□□ -1.76
SPG11-220ENST00000559933 RAB40CQ96S21 281 aa4.05□□□□□ -1.76
SPG11-220ENST00000559933 PRSS22Q9GZN4 317 aa4.05□□□□□ -1.76
SPG11-220ENST00000559933 MFFQ9GZY8 342 aa4.05□□□□□ -1.76
SPG11-220ENST00000559933 HIPK2Q9H2X6 1198 aa4.05□□□□□ -1.76
SPG11-220ENST00000559933 FKBP11Q9NYL4 201 aa4.05□□□□□ -1.76
SPG11-220ENST00000559933 STRAPQ9Y3F4 350 aaKnown RBP4.05□□□□□ -1.76
SPG11-220ENST00000559933 HSPB11Q9Y547 144 aa4.05□□□□□ -1.76
SPG11-220ENST00000559933 F11RQ9Y624 299 aaKnown RBP4.05□□□□□ -1.76
SPG11-220ENST00000559933 NBEAL1Q6ZS30 2694 aa4.05□□□□□ -1.76
SPG11-220ENST00000559933 TENM1Q9UKZ4 2725 aa4.04□□□□□ -1.76
SPG11-220ENST00000559933 IGHV3-35A0A0C4DH35 117 aa4.04□□□□□ -1.76
SPG11-220ENST00000559933 PSMB11A5LHX3 300 aa4.04□□□□□ -1.76
SPG11-220ENST00000559933 I3L2K1 104 aa4.04□□□□□ -1.76
SPG11-220ENST00000559933 AP4M1O00189 453 aa4.04□□□□□ -1.76
SPG11-220ENST00000559933 EIF3GO75821 320 aaKnown RBP eCLIP4.04□□□□□ -1.76
SPG11-220ENST00000559933 TSPAN9O75954 239 aa4.04□□□□□ -1.76
SPG11-220ENST00000559933 TRGV3P03979 118 aa4.04□□□□□ -1.76
SPG11-220ENST00000559933 RLN2P04090 185 aa4.04□□□□□ -1.76
SPG11-220ENST00000559933 CRYBA1P05813 215 aa4.04□□□□□ -1.76
SPG11-220ENST00000559933 CRYGCP07315 174 aa4.04□□□□□ -1.76
SPG11-220ENST00000559933 DEFA4P12838 97 aa4.04□□□□□ -1.76
SPG11-220ENST00000559933 PVALBP20472 110 aaPredicted RBP4.04□□□□□ -1.76
SPG11-220ENST00000559933 SNCAP37840 140 aa4.04□□□□□ -1.76
SPG11-220ENST00000559933 OPRK1P41145 380 aa4.04□□□□□ -1.76
SPG11-220ENST00000559933 SULT1A1P50225 295 aa4.04□□□□□ -1.76
SPG11-220ENST00000559933 TPPP2P59282 170 aa4.04□□□□□ -1.76
SPG11-220ENST00000559933 ERHP84090 104 aaKnown RBP4.04□□□□□ -1.76
SPG11-220ENST00000559933 RHOGP84095 191 aa4.04□□□□□ -1.76
SPG11-220ENST00000559933 RUNX1Q01196 453 aa4.04□□□□□ -1.76
SPG11-220ENST00000559933 FGL1Q08830 312 aa4.04□□□□□ -1.76
SPG11-220ENST00000559933 SCGB2A2Q13296 93 aa4.04□□□□□ -1.76
SPG11-220ENST00000559933 C2orf83Q53S99 150 aa4.04□□□□□ -1.76
SPG11-220ENST00000559933 KHDC1LQ5JSQ8 128 aa4.04□□□□□ -1.76
SPG11-220ENST00000559933 IGFL4Q6B9Z1 124 aa4.04□□□□□ -1.76
SPG11-220ENST00000559933 RPL7L1Q6DKI1 246 aaKnown RBP4.04□□□□□ -1.76
SPG11-220ENST00000559933 SLC16A13Q7RTY0 426 aa4.04□□□□□ -1.76
SPG11-220ENST00000559933 UBAC2Q8NBM4 344 aa4.04□□□□□ -1.76
SPG11-220ENST00000559933 OR5C1Q8NGR4 320 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms