RNA–Protein interactions for RNA: ENST00000548080.5

HDAC7-227, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-227ENST00000548080 ATP6V0CP27449 155 aa13.61□□□□□ -0.23
HDAC7-227ENST00000548080 GNPNAT1Q96EK6 184 aaPredicted RBP13.61□□□□□ -0.23
HDAC7-227ENST00000548080 SMCO3A2RU48 225 aa13.6□□□□□ -0.23
HDAC7-227ENST00000548080 EGR2P11161 476 aaPredicted RBP13.6□□□□□ -0.23
HDAC7-227ENST00000548080 CTRB1P17538 263 aa13.6□□□□□ -0.23
HDAC7-227ENST00000548080 GPX4P36969 197 aaPredicted RBP13.6□□□□□ -0.23
HDAC7-227ENST00000548080 CD69Q07108 199 aa13.6□□□□□ -0.23
HDAC7-227ENST00000548080 FAM74A1Q5RGS3 127 aa13.6□□□□□ -0.23
HDAC7-227ENST00000548080 ASPHD1Q5U4P2 390 aa13.6□□□□□ -0.23
HDAC7-227ENST00000548080 CTRB2Q6GPI1 263 aa13.6□□□□□ -0.23
HDAC7-227ENST00000548080 OR5AU1Q8NGC0 362 aa13.6□□□□□ -0.23
HDAC7-227ENST00000548080 WIPF2Q8TF74 440 aaPredicted RBP13.6□□□□□ -0.23
HDAC7-227ENST00000548080 CACNG8Q8WXS5 425 aa13.6□□□□□ -0.23
HDAC7-227ENST00000548080 SH3BGRL3Q9H299 93 aa13.6□□□□□ -0.23
HDAC7-227ENST00000548080 SLC25A32Q9H2D1 315 aa13.6□□□□□ -0.23
HDAC7-227ENST00000548080 PARP11Q9NR21 331 aa13.6□□□□□ -0.23
HDAC7-227ENST00000548080 FBXO7Q9Y3I1 522 aa13.6□□□□□ -0.23
HDAC7-227ENST00000548080 TRRAPQ9Y4A5 3859 aa13.6□□□□□ -0.23
HDAC7-227ENST00000548080 NPIPB5A8MRT5 1133 aa13.59□□□□□ -0.23
HDAC7-227ENST00000548080 CRYGCP07315 174 aa13.59□□□□□ -0.23
HDAC7-227ENST00000548080 FGF7P21781 194 aa13.59□□□□□ -0.23
HDAC7-227ENST00000548080 MFAP2P55001 183 aa13.59□□□□□ -0.23
HDAC7-227ENST00000548080 RAB14P61106 215 aa13.59□□□□□ -0.23
HDAC7-227ENST00000548080 TTC9CQ8N5M4 171 aa13.59□□□□□ -0.23
HDAC7-227ENST00000548080 OR1L6Q8NGR2 347 aa13.59□□□□□ -0.23
HDAC7-227ENST00000548080 SGMS2Q8NHU3 365 aa13.59□□□□□ -0.23
HDAC7-227ENST00000548080 NPVFQ9HCQ7 196 aa13.59□□□□□ -0.23
HDAC7-227ENST00000548080 A0A1W2PRX2 142 aa13.58□□□□□ -0.24
HDAC7-227ENST00000548080 PSMB11A5LHX3 300 aa13.58□□□□□ -0.24
HDAC7-227ENST00000548080 ATP6V0E1O15342 81 aa13.58□□□□□ -0.24
HDAC7-227ENST00000548080 DEFA4P12838 97 aa13.58□□□□□ -0.24
HDAC7-227ENST00000548080 RUNX1Q01196 453 aa13.58□□□□□ -0.24
HDAC7-227ENST00000548080 NSUN5P1Q3KNT7 163 aa13.58□□□□□ -0.24
HDAC7-227ENST00000548080 TCTEX1D4Q5JR98 221 aa13.58□□□□□ -0.24
HDAC7-227ENST00000548080 BTNL8Q6UX41 500 aa13.58□□□□□ -0.24
HDAC7-227ENST00000548080 TREML4Q6UXN2 200 aa13.58□□□□□ -0.24
HDAC7-227ENST00000548080 C19orf35Q6ZS72 473 aa13.58□□□□□ -0.24
HDAC7-227ENST00000548080 LFNGQ8NES3 379 aa13.58□□□□□ -0.24
HDAC7-227ENST00000548080 OR2G3Q8NGZ4 309 aa13.58□□□□□ -0.24
HDAC7-227ENST00000548080 MISP3Q96FF7 219 aa13.58□□□□□ -0.24
HDAC7-227ENST00000548080 CITED2Q99967 270 aaPredicted RBP13.58□□□□□ -0.24
HDAC7-227ENST00000548080 WDR83OSQ9Y284 106 aa13.58□□□□□ -0.24
HDAC7-227ENST00000548080 CORTO00230 105 aa13.57□□□□□ -0.24
HDAC7-227ENST00000548080 MLANAQ16655 118 aa13.57□□□□□ -0.24
HDAC7-227ENST00000548080 CLLU1Q5K131 121 aa13.57□□□□□ -0.24
HDAC7-227ENST00000548080 ETFRF1Q6IPR1 90 aa13.57□□□□□ -0.24
HDAC7-227ENST00000548080 LCNL1Q6ZST4 164 aa13.57□□□□□ -0.24
HDAC7-227ENST00000548080 SLC16A13Q7RTY0 426 aa13.57□□□□□ -0.24
HDAC7-227ENST00000548080 TMEM68Q96MH6 324 aa13.57□□□□□ -0.24
HDAC7-227ENST00000548080 PSMG3Q9BT73 122 aaPredicted RBP13.57□□□□□ -0.24
HDAC7-227ENST00000548080 RSG1Q9BU20 258 aa13.57□□□□□ -0.24
HDAC7-227ENST00000548080 PLA2G2EQ9NZK7 142 aa13.57□□□□□ -0.24
HDAC7-227ENST00000548080 TIMM9Q9Y5J7 89 aa13.57□□□□□ -0.24
HDAC7-227ENST00000548080 RFNGQ9Y644 331 aa13.57□□□□□ -0.24
HDAC7-227ENST00000548080 G3V318 75 aa13.56□□□□□ -0.24
HDAC7-227ENST00000548080 AP4M1O00189 453 aa13.56□□□□□ -0.24
HDAC7-227ENST00000548080 MPDU1O75352 247 aa13.56□□□□□ -0.24
HDAC7-227ENST00000548080 OPRK1P41145 380 aa13.56□□□□□ -0.24
HDAC7-227ENST00000548080 SULT1A2P50226 295 aa13.56□□□□□ -0.24
HDAC7-227ENST00000548080 AKR1C1Q04828 323 aa13.56□□□□□ -0.24
HDAC7-227ENST00000548080 GAMTQ14353 236 aa13.56□□□□□ -0.24
HDAC7-227ENST00000548080 KHDC1LQ5JSQ8 128 aa13.56□□□□□ -0.24
HDAC7-227ENST00000548080 UNQ5815/PRO19632Q6UWF5 114 aa13.56□□□□□ -0.24
HDAC7-227ENST00000548080 LRRC20Q8TCA0 184 aa13.56□□□□□ -0.24
HDAC7-227ENST00000548080 RNF141Q8WVD5 230 aa13.56□□□□□ -0.24
HDAC7-227ENST00000548080 SLC35E1Q96K37 410 aa13.56□□□□□ -0.24
HDAC7-227ENST00000548080 FNDC4Q9H6D8 234 aaPredicted RBP13.56□□□□□ -0.24
HDAC7-227ENST00000548080 DMRT1Q9Y5R6 373 aa13.56□□□□□ -0.24
HDAC7-227ENST00000548080 VWFP04275 2813 aa13.56□□□□□ -0.24
HDAC7-227ENST00000548080 RPS10-NUDT3A0A1W2PQS6 291 aa13.55□□□□□ -0.24
HDAC7-227ENST00000548080 ECSCRQ19T08 205 aa13.55□□□□□ -0.24
HDAC7-227ENST00000548080 TMEM144Q7Z5S9 345 aa13.55□□□□□ -0.24
HDAC7-227ENST00000548080 ZNF709Q8N972 641 aa13.55□□□□□ -0.24
HDAC7-227ENST00000548080 PCNPQ8WW12 178 aaKnown RBP13.55□□□□□ -0.24
HDAC7-227ENST00000548080 WNK1Q9H4A3 2382 aa13.55□□□□□ -0.24
HDAC7-227ENST00000548080 C17orf112F2Z3M2 114 aa13.55□□□□□ -0.24
HDAC7-227ENST00000548080 CYB5BO43169 146 aa13.55□□□□□ -0.24
HDAC7-227ENST00000548080 TSPAN15O95858 294 aa13.55□□□□□ -0.24
HDAC7-227ENST00000548080 NMBP08949 121 aa13.55□□□□□ -0.24
HDAC7-227ENST00000548080 RAB5CP51148 216 aa13.55□□□□□ -0.24
HDAC7-227ENST00000548080 CRIP2P52943 208 aaPredicted RBP13.55□□□□□ -0.24
HDAC7-227ENST00000548080 AKIRIN2Q53H80 203 aa13.55□□□□□ -0.24
HDAC7-227ENST00000548080 TEPPQ6URK8 271 aa13.55□□□□□ -0.24
HDAC7-227ENST00000548080 TMEM182Q6ZP80 229 aaPredicted RBP13.55□□□□□ -0.24
HDAC7-227ENST00000548080 OR5T1Q8NG75 326 aa13.55□□□□□ -0.24
HDAC7-227ENST00000548080 FAM110DQ8TAY7 271 aaPredicted RBP13.55□□□□□ -0.24
HDAC7-227ENST00000548080 NPCDR1Q9BY65 106 aa13.55□□□□□ -0.24
HDAC7-227ENST00000548080 LSM4Q9Y4Z0 139 aaKnown RBP13.55□□□□□ -0.24
HDAC7-227ENST00000548080 UMAD1C9J7I0 102 aa13.54□□□□□ -0.24
HDAC7-227ENST00000548080 SERF2P84101 59 aa13.54□□□□□ -0.24
HDAC7-227ENST00000548080 RAB31Q13636 194 aa13.54□□□□□ -0.24
HDAC7-227ENST00000548080 OR4X2Q8NGF9 303 aa13.54□□□□□ -0.24
HDAC7-227ENST00000548080 PKD1L1Q8TDX9 2849 aa13.53□□□□□ -0.24
HDAC7-227ENST00000548080 IGLV11-55A0A075B6I3 123 aa13.53□□□□□ -0.24
HDAC7-227ENST00000548080 TCRBV4S1A1TA0A5B7 111 aa13.53□□□□□ -0.24
HDAC7-227ENST00000548080 ADARB2-AS1A8MUL3 147 aa13.53□□□□□ -0.24
HDAC7-227ENST00000548080 MT-CO2P00403 227 aa13.53□□□□□ -0.24
HDAC7-227ENST00000548080 PRH1P02810 166 aa13.53□□□□□ -0.24
HDAC7-227ENST00000548080 IGF1P05019 195 aa13.53□□□□□ -0.24
HDAC7-227ENST00000548080 CAMLGP49069 296 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms